RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 EFCAB7A8K855 629 aa16.82■□□□□ 0.28
VIM-201ENST00000224237 FAAHO00519 579 aa16.82■□□□□ 0.28
VIM-201ENST00000224237 BCKDKO14874 412 aa16.82■□□□□ 0.28
VIM-201ENST00000224237 CT45A8P0DMV1 189 aa16.82■□□□□ 0.28
VIM-201ENST00000224237 CT45A9P0DMV2 189 aa16.82■□□□□ 0.28
VIM-201ENST00000224237 EFNA3P52797 238 aa16.82■□□□□ 0.28
VIM-201ENST00000224237 RGS8P57771 180 aaPredicted RBP16.82■□□□□ 0.28
VIM-201ENST00000224237 DCDP81605 110 aaKnown RBP16.82■□□□□ 0.28
VIM-201ENST00000224237 OCA2Q04671 838 aa16.82■□□□□ 0.28
VIM-201ENST00000224237 FLYWCH1Q4VC44 716 aa16.82■□□□□ 0.28
VIM-201ENST00000224237 CT45A2Q5DJT8 189 aa16.82■□□□□ 0.28
VIM-201ENST00000224237 NPSR1Q6W5P4 371 aa16.82■□□□□ 0.28
VIM-201ENST00000224237 THAP5Q7Z6K1 395 aa16.82■□□□□ 0.28
VIM-201ENST00000224237 ZNF786Q8N393 782 aa16.82■□□□□ 0.28
VIM-201ENST00000224237 CLIP4Q8N3C7 705 aa16.82■□□□□ 0.28
VIM-201ENST00000224237 OR14A16Q8NHC5 309 aa16.82■□□□□ 0.28
VIM-201ENST00000224237 STT3BQ8TCJ2 826 aa16.82■□□□□ 0.28
VIM-201ENST00000224237 DAZLQ92904 295 aaKnown RBP16.82■□□□□ 0.28
VIM-201ENST00000224237 ART5Q96L15 291 aa16.82■□□□□ 0.28
VIM-201ENST00000224237 G6PC3Q9BUM1 346 aa16.82■□□□□ 0.28
VIM-201ENST00000224237 ITPAQ9BY32 194 aa16.82■□□□□ 0.28
VIM-201ENST00000224237 GABARAPL3Q9BY60 117 aa16.82■□□□□ 0.28
VIM-201ENST00000224237 ING2Q9H160 280 aa16.82■□□□□ 0.28
VIM-201ENST00000224237 C14orf105Q9NVL8 296 aa16.82■□□□□ 0.28
VIM-201ENST00000224237 RLIMQ9NVW2 624 aa16.82■□□□□ 0.28
VIM-201ENST00000224237 GPR55Q9Y2T6 319 aaPredicted RBP16.82■□□□□ 0.28
VIM-201ENST00000224237 FUT4P22083 530 aa16.82■□□□□ 0.28
VIM-201ENST00000224237 IFNA8P32881 189 aa16.82■□□□□ 0.28
VIM-201ENST00000224237 POLR2IP36954 125 aaKnown RBP16.82■□□□□ 0.28
VIM-201ENST00000224237 SLC37A1P57057 533 aa16.82■□□□□ 0.28
VIM-201ENST00000224237 TAS2R41P59536 307 aa16.82■□□□□ 0.28
VIM-201ENST00000224237 MAPK14Q16539 360 aa16.82■□□□□ 0.28
VIM-201ENST00000224237 ZNF691Q5VV52 312 aa16.82■□□□□ 0.28
VIM-201ENST00000224237 PRSS58Q8IYP2 241 aa16.82■□□□□ 0.28
VIM-201ENST00000224237 SLC46A1Q96NT5 459 aa16.82■□□□□ 0.28
VIM-201ENST00000224237 ARMC7Q9H6L4 198 aa16.82■□□□□ 0.28
VIM-201ENST00000224237 APMAPQ9HDC9 416 aa16.82■□□□□ 0.28
VIM-201ENST00000224237 ENOPH1Q9UHY7 261 aa16.82■□□□□ 0.28
VIM-201ENST00000224237 CENPVL1A0A0U1RR11 272 aa16.81■□□□□ 0.28
VIM-201ENST00000224237 A8MUA0 341 aa16.81■□□□□ 0.28
VIM-201ENST00000224237 TNFRSF10AO00220 468 aa16.81■□□□□ 0.28
VIM-201ENST00000224237 PEX12O00623 359 aa16.81■□□□□ 0.28
VIM-201ENST00000224237 AP3D1O14617 1153 aa16.81■□□□□ 0.28
VIM-201ENST00000224237 FRS3O43559 492 aa16.81■□□□□ 0.28
VIM-201ENST00000224237 ONECUT2O95948 504 aa16.81■□□□□ 0.28
VIM-201ENST00000224237 IGKV3-11P04433 115 aa16.81■□□□□ 0.28
VIM-201ENST00000224237 ZGLP1P0C6A0 271 aa16.81■□□□□ 0.28
VIM-201ENST00000224237 CCNYL3P0C7X3 344 aa16.81■□□□□ 0.28
VIM-201ENST00000224237 SMIM18P0DKX4 95 aa16.81■□□□□ 0.28
VIM-201ENST00000224237 CYP4B1P13584 511 aa16.81■□□□□ 0.28
VIM-201ENST00000224237 CBLP22681 906 aa16.81■□□□□ 0.28
VIM-201ENST00000224237 RFX3P48380 749 aa16.81■□□□□ 0.28
VIM-201ENST00000224237 NPRL3Q12980 569 aa16.81■□□□□ 0.28
VIM-201ENST00000224237 ZNF385CQ66K41 422 aaPredicted RBP16.81■□□□□ 0.28
VIM-201ENST00000224237 ZNF770Q6IQ21 691 aaPredicted RBP16.81■□□□□ 0.28
VIM-201ENST00000224237 LAPTM4BQ86VI4 370 aa16.81■□□□□ 0.28
VIM-201ENST00000224237 SUMF1Q8NBK3 374 aa16.81■□□□□ 0.28
VIM-201ENST00000224237 AQP11Q8NBQ7 271 aa16.81■□□□□ 0.28
VIM-201ENST00000224237 SETD9Q8NE22 299 aa16.81■□□□□ 0.28
VIM-201ENST00000224237 OR4N2Q8NGD1 307 aa16.81■□□□□ 0.28
VIM-201ENST00000224237 SLC2A12Q8TD20 617 aa16.81■□□□□ 0.28
VIM-201ENST00000224237 NIPSNAP1Q9BPW8 284 aa16.81■□□□□ 0.28
VIM-201ENST00000224237 OR8D2Q9GZM6 311 aa16.81■□□□□ 0.28
VIM-201ENST00000224237 NDUFA13Q9P0J0 144 aa16.81■□□□□ 0.28
VIM-201ENST00000224237 CBLCQ9ULV8 474 aa16.81■□□□□ 0.28
VIM-201ENST00000224237 OR10H1Q9Y4A9 318 aa16.81■□□□□ 0.28
VIM-201ENST00000224237 CLDN24A6NM45 220 aa16.8■□□□□ 0.28
VIM-201ENST00000224237 PRR33A8MZF0 331 aa16.8■□□□□ 0.28
VIM-201ENST00000224237 POLR1CO15160 346 aaPredicted RBP16.8■□□□□ 0.28
VIM-201ENST00000224237 CD59P13987 128 aa16.8■□□□□ 0.28
VIM-201ENST00000224237 FOXL2P58012 376 aa16.8■□□□□ 0.28
VIM-201ENST00000224237 KCTD21Q4G0X4 260 aa16.8■□□□□ 0.28
VIM-201ENST00000224237 MRPL2Q5T653 305 aaKnown RBP16.8■□□□□ 0.28
VIM-201ENST00000224237 LINC00471Q8N535 108 aa16.8■□□□□ 0.28
VIM-201ENST00000224237 BMPERQ8N8U9 685 aa16.8■□□□□ 0.28
VIM-201ENST00000224237 SLC7A13Q8TCU3 470 aa16.8■□□□□ 0.28
VIM-201ENST00000224237 FUZQ9BT04 418 aa16.8■□□□□ 0.28
VIM-201ENST00000224237 MRPS26Q9BYN8 205 aaKnown RBP16.8■□□□□ 0.28
VIM-201ENST00000224237 EVA1AQ9H8M9 152 aa16.8■□□□□ 0.28
VIM-201ENST00000224237 KCNE5Q9UJ90 142 aa16.8■□□□□ 0.28
VIM-201ENST00000224237 PCDHGA10Q9Y5H3 936 aa16.8■□□□□ 0.28
VIM-201ENST00000224237 NPIPA5A0A0B4J1W7 369 aa16.8■□□□□ 0.28
VIM-201ENST00000224237 NPIPA7E9PJI5 369 aa16.8■□□□□ 0.28
VIM-201ENST00000224237 OR10H3O60404 316 aa16.8■□□□□ 0.28
VIM-201ENST00000224237 CPNE3O75131 537 aaKnown RBP16.8■□□□□ 0.28
VIM-201ENST00000224237 DDAH2O95865 285 aa16.8■□□□□ 0.28
VIM-201ENST00000224237 ADAP00813 363 aa16.8■□□□□ 0.28
VIM-201ENST00000224237 ZNF806P0C7X5 589 aa16.8■□□□□ 0.28
VIM-201ENST00000224237 NPIPA8P0DM63 369 aa16.8■□□□□ 0.28
VIM-201ENST00000224237 RYKP34925 604 aa16.8■□□□□ 0.28
VIM-201ENST00000224237 CLK3P49761 638 aaKnown RBP16.8■□□□□ 0.28
VIM-201ENST00000224237 SPEM2Q0P670 501 aa16.8■□□□□ 0.28
VIM-201ENST00000224237 FOXD4Q12950 439 aaPredicted RBP16.8■□□□□ 0.28
VIM-201ENST00000224237 CCDC157Q569K6 752 aa16.8■□□□□ 0.28
VIM-201ENST00000224237 ZAR1Q86SH2 424 aa16.8■□□□□ 0.28
VIM-201ENST00000224237 TSPYL5Q86VY4 417 aaPredicted RBP16.8■□□□□ 0.28
VIM-201ENST00000224237 PARP8Q8N3A8 854 aa16.8■□□□□ 0.28
VIM-201ENST00000224237 ZNF721Q8TF20 911 aa16.8■□□□□ 0.28
VIM-201ENST00000224237 CTRCQ99895 268 aa16.8■□□□□ 0.28
VIM-201ENST00000224237 YTHDF1Q9BYJ9 559 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 141.6 ms