RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Vwa5b2Q3UR50 1248 aa14.74□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Aimp2Q8R010 320 aa14.74□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Rhbdl1Q8VC82 373 aa14.74□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Grk5Q8VEB1 590 aa14.74□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Atg12Q9CQY1 141 aa14.74□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Slc25a27Q9D6D0 322 aa14.74□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Ramp2Q9WUP0 189 aa14.74□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Taf1Q80UV9 1891 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Gm21876F6XK35 94 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Rnpepl1G5E872 720 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Vmn1r169L7N275 304 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Tp63O88898 680 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 P01669 111 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Slc6a11P31650 627 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 B4galnt2Q09199 510 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Slc5a6Q5U4D8 634 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Fbxl22Q8C7B6 236 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 9530002B09RikQ9EPV7 135 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Olfr239A0PK55 315 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Olfr1164A2AVT5 326 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Olfr55K7N6Q1 315 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Vmn2r42O35192 852 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 MthfsdQ3URQ7 372 aaKnown RBP14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Xkr5Q5GH66 676 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Cyb5d2Q5SSH8 263 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Tas2r39Q7TQA5 319 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 GnalQ8CGK7 381 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Desi1Q9CQT7 168 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Q9D5Y0 588 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Snap29Q9ERB0 260 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Rab25Q9WTL2 213 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Olfr519K7N645 319 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 DhfrP00375 187 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Nr2f6P43136 390 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Rpl6P47911 296 aaKnown RBP14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Defa14P50712 85 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Rps15aP62245 130 aaKnown RBP14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 VldlrP98156 873 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Atp5a1Q03265 553 aaKnown RBP14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Qsox2Q3TMX7 692 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Commd6Q3V4B5 87 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Gdi2Q61598 445 aaKnown RBP14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 CptpQ8BS40 216 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Nlgn3Q8BYM5 825 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Nudt6Q8CH40 313 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Cables2Q8K3M5 476 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Padi6Q8K3V4 682 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Rpe65Q91ZQ5 533 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Psat1Q99K85 370 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 MrgprhQ99MT8 321 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Q9CPZ3 230 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Pcbd2Q9CZL5 136 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Tmem138Q9D6G5 162 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Sh3bgrlQ9JJU8 114 aaKnown RBP14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Uchl1Q9R0P9 223 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 CalcrlQ9R1W5 463 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Gm5141A0A0J9YUW3 581 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Gm7951E9Q0A2 213 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Maml2F6U238 1170 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Gm6482F6YHC1 213 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Gm17124F6ZIG1 213 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Gm3099J3QPA5 205 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Tssk2O54863 358 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Slc2a9Q3T9X0 538 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 GabrpQ8QZW7 440 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Znf639Q99KZ6 485 aa14.73□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Ap1g1P22892 822 aa14.72□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Nr4a2Q06219 598 aa14.72□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Pou6f2Q8BJI4 691 aa14.72□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Cdhr1Q8VHP6 859 aa14.72□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Teddm3Q9CQH1 294 aa14.72□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Fam174aQ9D3L0 190 aa14.72□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Fam122cQ9D5J5 180 aa14.72□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Trim3Q9R1R2 744 aa14.72□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Sh3yl1O08641 340 aa14.72□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Sox9Q04887 507 aa14.72□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 NnatQ61979 81 aa14.72□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Zfp184Q7TSH9 737 aa14.72□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Abhd13Q80UX8 337 aa14.72□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Mrgpra5Q91ZC7 304 aa14.72□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 TescQ9JKL5 214 aa14.72□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Vmn2r110E9PWD5 858 aa14.72□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Vmn2r90E9PXJ8 863 aa14.72□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Dok2O70469 412 aa14.72□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Bmp7P23359 430 aa14.72□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Adamts8P57110 905 aa14.72□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Uhrf2Q7TMI3 803 aa14.72□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Gykl1Q8C635 549 aa14.72□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Znf628Q8CJ78 1038 aa14.72□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Q8K207 121 aa14.72□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Cmtm3Q99LJ5 184 aa14.72□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 SelenosQ9BCZ4 190 aa14.72□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Upk1aQ9D132 257 aa14.72□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Serpinb7Q9D695 380 aa14.72□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Psma6Q9QUM9 246 aa14.72□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 SisF8VQM5 1818 aa14.72□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Wscd2D4PHA7 571 aa14.72□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 H2-T23P06339 357 aa14.72□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Rln1P47932 185 aa14.72□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Klhl8P59280 629 aa14.72□□□□□ -0.05
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms