RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 KCNJ11Q14654 390 aa16.13■□□□□ 0.17
CACNA1A-253ENST00000637927 CLINT1Q14677 625 aa16.13■□□□□ 0.17
CACNA1A-253ENST00000637927 P2RY14Q15391 338 aa16.13■□□□□ 0.17
CACNA1A-253ENST00000637927 ZNF529Q6P280 563 aa16.13■□□□□ 0.17
CACNA1A-253ENST00000637927 ZDHHC24Q6UX98 284 aa16.13■□□□□ 0.17
CACNA1A-253ENST00000637927 GSG1LQ6UXU4 331 aa16.13■□□□□ 0.17
CACNA1A-253ENST00000637927 HES7Q9BYE0 225 aa16.13■□□□□ 0.17
CACNA1A-253ENST00000637927 KCND1Q9NSA2 647 aa16.13■□□□□ 0.17
CACNA1A-253ENST00000637927 ANKRD30BLA7E2S9 258 aa16.13■□□□□ 0.17
CACNA1A-253ENST00000637927 CREBL2O60519 120 aaPredicted RBP16.13■□□□□ 0.17
CACNA1A-253ENST00000637927 NTHL1P78549 312 aa16.13■□□□□ 0.17
CACNA1A-253ENST00000637927 PTP4A2Q12974 167 aa16.13■□□□□ 0.17
CACNA1A-253ENST00000637927 ZNF599Q96NL3 588 aa16.13■□□□□ 0.17
CACNA1A-253ENST00000637927 MAPKAP1Q9BPZ7 522 aa16.13■□□□□ 0.17
CACNA1A-253ENST00000637927 CHST11Q9NPF2 352 aa16.13■□□□□ 0.17
CACNA1A-253ENST00000637927 NKX1-2Q9UD57 310 aaPredicted RBP16.13■□□□□ 0.17
CACNA1A-253ENST00000637927 TRBV11-1A0A0K0K1C0 115 aa16.13■□□□□ 0.17
CACNA1A-253ENST00000637927 BET1O15155 118 aa16.13■□□□□ 0.17
CACNA1A-253ENST00000637927 LRRTM2O43300 516 aa16.13■□□□□ 0.17
CACNA1A-253ENST00000637927 YIF1AO95070 293 aa16.13■□□□□ 0.17
CACNA1A-253ENST00000637927 PITPNBP48739 271 aa16.13■□□□□ 0.17
CACNA1A-253ENST00000637927 EIF5AL1Q6IS14 154 aaKnown RBP16.13■□□□□ 0.17
CACNA1A-253ENST00000637927 KBTBD6Q86V97 674 aa16.13■□□□□ 0.17
CACNA1A-253ENST00000637927 NRROSQ86YC3 692 aa16.13■□□□□ 0.17
CACNA1A-253ENST00000637927 KIAA1958Q8N8K9 716 aa16.13■□□□□ 0.17
CACNA1A-253ENST00000637927 ASCC1Q8N9N2 400 aaKnown RBP16.13■□□□□ 0.17
CACNA1A-253ENST00000637927 C3orf58Q8NDZ4 430 aa16.13■□□□□ 0.17
CACNA1A-253ENST00000637927 MAL2Q969L2 176 aa16.13■□□□□ 0.17
CACNA1A-253ENST00000637927 LMAN1LQ9HAT1 526 aa16.13■□□□□ 0.17
CACNA1A-253ENST00000637927 TMEM248Q9NWD8 314 aa16.13■□□□□ 0.17
CACNA1A-253ENST00000637927 FNIP2Q9P278 1114 aa16.13■□□□□ 0.17
CACNA1A-253ENST00000637927 PMM2O15305 246 aa16.12■□□□□ 0.17
CACNA1A-253ENST00000637927 CNIH1O95406 144 aa16.12■□□□□ 0.17
CACNA1A-253ENST00000637927 PLBD1Q6P4A8 553 aa16.12■□□□□ 0.17
CACNA1A-253ENST00000637927 PAMR1Q6UXH9 720 aa16.12■□□□□ 0.17
CACNA1A-253ENST00000637927 CHPT1Q8WUD6 406 aa16.12■□□□□ 0.17
CACNA1A-253ENST00000637927 POP5Q969H6 163 aaKnown RBP16.12■□□□□ 0.17
CACNA1A-253ENST00000637927 SEMA4CQ9C0C4 833 aa16.12■□□□□ 0.17
CACNA1A-253ENST00000637927 A3GALT2U3KPV4 340 aa16.12■□□□□ 0.17
CACNA1A-253ENST00000637927 EFCAB7A8K855 629 aa16.12■□□□□ 0.17
CACNA1A-253ENST00000637927 ZNF821O75541 412 aaPredicted RBP16.12■□□□□ 0.17
CACNA1A-253ENST00000637927 CTXN1P60606 82 aa16.12■□□□□ 0.17
CACNA1A-253ENST00000637927 UBFD1O14562 309 aaKnown RBP16.12■□□□□ 0.17
CACNA1A-253ENST00000637927 GLSO94925 669 aaPredicted RBP16.12■□□□□ 0.17
CACNA1A-253ENST00000637927 SNAI1O95863 264 aaPredicted RBP16.12■□□□□ 0.17
CACNA1A-253ENST00000637927 PET100P0DJ07 73 aa16.12■□□□□ 0.17
CACNA1A-253ENST00000637927 ANXA8P13928 327 aa16.12■□□□□ 0.17
CACNA1A-253ENST00000637927 MAGEB1P43366 347 aa16.12■□□□□ 0.17
CACNA1A-253ENST00000637927 PPP5CP53041 499 aa16.12■□□□□ 0.17
CACNA1A-253ENST00000637927 EDDM3AQ14507 147 aa16.12■□□□□ 0.17
CACNA1A-253ENST00000637927 UPP1Q16831 310 aa16.12■□□□□ 0.17
CACNA1A-253ENST00000637927 TMEM53Q6P2H8 277 aa16.12■□□□□ 0.17
CACNA1A-253ENST00000637927 SLC35F5Q8WV83 523 aa16.12■□□□□ 0.17
CACNA1A-253ENST00000637927 FCRL3Q96P31 734 aaPredicted RBP16.12■□□□□ 0.17
CACNA1A-253ENST00000637927 ADARB1P78563 741 aaKnown RBP16.12■□□□□ 0.17
CACNA1A-253ENST00000637927 OR5M1Q8NGP8 315 aa16.12■□□□□ 0.17
CACNA1A-253ENST00000637927 FAM117AQ9C073 453 aa16.12■□□□□ 0.17
CACNA1A-253ENST00000637927 IGHV3-9P01782 118 aa16.12■□□□□ 0.17
CACNA1A-253ENST00000637927 SERPINA5P05154 406 aa16.12■□□□□ 0.17
CACNA1A-253ENST00000637927 ZNF30P17039 623 aa16.12■□□□□ 0.17
CACNA1A-253ENST00000637927 GPX6P59796 221 aa16.12■□□□□ 0.17
CACNA1A-253ENST00000637927 ZNF678Q5SXM1 525 aa16.12■□□□□ 0.17
CACNA1A-253ENST00000637927 STEAP2Q8NFT2 490 aa16.12■□□□□ 0.17
CACNA1A-253ENST00000637927 GIMAP5Q96F15 307 aa16.12■□□□□ 0.17
CACNA1A-253ENST00000637927 HSD17B6O14756 317 aa16.11■□□□□ 0.17
CACNA1A-253ENST00000637927 ZNF888P0CJ79 500 aaPredicted RBP16.11■□□□□ 0.17
CACNA1A-253ENST00000637927 ACRV1P26436 265 aa16.11■□□□□ 0.17
CACNA1A-253ENST00000637927 HOXD11P31277 338 aaPredicted RBP16.11■□□□□ 0.17
CACNA1A-253ENST00000637927 GSK3BP49841 420 aa16.11■□□□□ 0.17
CACNA1A-253ENST00000637927 ZNF367Q7RTV3 350 aa16.11■□□□□ 0.17
CACNA1A-253ENST00000637927 PLEKHM1Q9Y4G2 1056 aa16.11■□□□□ 0.17
CACNA1A-253ENST00000637927 EVI2BP34910 448 aa16.11■□□□□ 0.17
CACNA1A-253ENST00000637927 MYBPHQ13203 477 aa16.11■□□□□ 0.17
CACNA1A-253ENST00000637927 SMCO4Q9NRQ5 59 aa16.11■□□□□ 0.17
CACNA1A-253ENST00000637927 MTCH1Q9NZJ7 389 aa16.11■□□□□ 0.17
CACNA1A-253ENST00000637927 H3BSA7 217 aa16.11■□□□□ 0.17
CACNA1A-253ENST00000637927 MATN2O00339 956 aa16.11■□□□□ 0.17
CACNA1A-253ENST00000637927 ONECUT2O95948 504 aa16.11■□□□□ 0.17
CACNA1A-253ENST00000637927 MRPL41Q8IXM3 137 aaKnown RBP16.11■□□□□ 0.17
CACNA1A-253ENST00000637927 PAQR8Q8TEZ7 354 aa16.11■□□□□ 0.17
CACNA1A-253ENST00000637927 CRB3Q9BUF7 120 aa16.11■□□□□ 0.17
CACNA1A-253ENST00000637927 UBQLN2Q9UHD9 624 aa16.11■□□□□ 0.17
CACNA1A-253ENST00000637927 ADGRB1O14514 1584 aa16.11■□□□□ 0.17
CACNA1A-253ENST00000637927 TTLL8A6PVC2 850 aa16.11■□□□□ 0.17
CACNA1A-253ENST00000637927 CD63P08962 238 aa16.11■□□□□ 0.17
CACNA1A-253ENST00000637927 SSTR4P31391 388 aa16.11■□□□□ 0.17
CACNA1A-253ENST00000637927 TBPL1P62380 186 aa16.11■□□□□ 0.17
CACNA1A-253ENST00000637927 OPCMLQ14982 345 aa16.11■□□□□ 0.17
CACNA1A-253ENST00000637927 BAZ2AQ9UIF9 1905 aaKnown RBP16.11■□□□□ 0.17
CACNA1A-253ENST00000637927 ANKRD12Q6UB98 2062 aa16.11■□□□□ 0.17
CACNA1A-253ENST00000637927 H2AFB2P0C5Z0 115 aa16.11■□□□□ 0.17
CACNA1A-253ENST00000637927 GLO1Q04760 184 aa16.11■□□□□ 0.17
CACNA1A-253ENST00000637927 NANOS1Q8WY41 292 aaKnown RBP16.11■□□□□ 0.17
CACNA1A-253ENST00000637927 MYH6P13533 1939 aa16.11■□□□□ 0.17
CACNA1A-253ENST00000637927 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.11■□□□□ 0.17
CACNA1A-253ENST00000637927 PRAMEF20Q5VT98 475 aa16.11■□□□□ 0.17
CACNA1A-253ENST00000637927 NIPA2Q8N8Q9 360 aa16.11■□□□□ 0.17
CACNA1A-253ENST00000637927 TWSG1Q9GZX9 223 aa16.11■□□□□ 0.17
CACNA1A-253ENST00000637927 PYCR1P32322 319 aa16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 PRMT2P55345 433 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms