RNA–Protein interactions for RNA: ENST00000604024.5

CEP290-208, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-208ENST00000604024 EEF2P13639 858 aaKnown RBP0.53□□□□□ -2.32
CEP290-208ENST00000604024 MC5RP33032 325 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 ALDH3B2P48448 385 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 LCP2Q13094 533 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 GK2Q14410 553 aaPredicted RBP0.53□□□□□ -2.32
CEP290-208ENST00000604024 CD226Q15762 336 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 KRTAP13-2Q52LG2 175 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 ZNF836Q6ZNA1 936 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 USP50Q70EL3 339 aaPredicted RBP0.53□□□□□ -2.32
CEP290-208ENST00000604024 ADCK2Q7Z695 626 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 TDHQ8IZJ6 230 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 DNAJA4Q8WW22 397 aaPredicted RBP0.53□□□□□ -2.32
CEP290-208ENST00000604024 MYDGFQ969H8 173 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 PGAP3Q96FM1 320 aaPredicted RBP0.53□□□□□ -2.32
CEP290-208ENST00000604024 KLHL4Q9C0H6 718 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 OR51J1Q9H342 316 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 ZDHHC11Q9H8X9 412 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 IL1RL2Q9HB29 575 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 MMP26Q9NRE1 261 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 SLCO1C1Q9NYB5 712 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 ONECUT1Q9UBC0 465 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 EIF3KQ9UBQ5 218 aaKnown RBP0.53□□□□□ -2.32
CEP290-208ENST00000604024 SWAP70Q9UH65 585 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 ZDBF2Q9HCK1 2354 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 FER1L5A0AVI2 2057 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 ZNF609O15014 1411 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 TROQ12816 1431 aaPredicted RBP0.53□□□□□ -2.32
CEP290-208ENST00000604024 TNS3Q68CZ2 1445 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 MUC6Q6W4X9 2439 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 KIDINS220Q9ULH0 1771 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 TTC28Q96AY4 2481 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 RLFQ13129 1914 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 COL1A1P02452 1464 aaPredicted RBP0.53□□□□□ -2.32
CEP290-208ENST00000604024 PKD1L3Q7Z443 1732 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 A0A0G2JLM5 398 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 A0A1B0GUL7 405 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 USP27XA6NNY8 438 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 KBTBD13C9JR72 458 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 ACSL4O60488 711 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 RAD51DO75771 328 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 PNMTP11086 282 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 CELP19835 753 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 NPBWR1P48145 328 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 MOBPQ13875 183 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 ZNF273Q14593 569 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 SPHARQ15513 63 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 UNC50Q53HI1 259 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 ATRAIDQ6UW56 229 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 TRPM8Q7Z2W7 1104 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 KRT77Q7Z794 578 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 CREBRFQ8IUR6 639 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 C9orf40Q8IXQ3 194 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 OCC1Q8TAD7 63 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 NEIL3Q8TAT5 605 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 TSNARE1Q96NA8 513 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 IL4I1Q96RQ9 567 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 LRRC2Q9BYS8 371 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 ZDHHC6Q9H6R6 413 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 LMAN1LQ9HAT1 526 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 PLEK2Q9NYT0 353 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 BCCIPQ9P287 314 aaKnown RBP eCLIP0.53□□□□□ -2.32
CEP290-208ENST00000604024 NAP1L2Q9ULW6 460 aaPredicted RBP0.53□□□□□ -2.32
CEP290-208ENST00000604024 GPR34Q9UPC5 381 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 RPH3AQ9Y2J0 694 aaPredicted RBP0.53□□□□□ -2.32
CEP290-208ENST00000604024 SH3GLB1Q9Y371 365 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 MAGED1Q9Y5V3 778 aaPredicted RBP0.53□□□□□ -2.32
CEP290-208ENST00000604024 FAM169AQ9Y6X4 670 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 EIF2AK4Q9P2K8 1649 aaKnown RBP0.53□□□□□ -2.32
CEP290-208ENST00000604024 ABCC6O95255 1503 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 ZFYVE9O95405 1425 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 CEP162Q5TB80 1403 aa0.53□□□□□ -2.32
CEP290-208ENST00000604024 BDP1A6H8Y1 2624 aa0.53□□□□□ -2.33
CEP290-208ENST00000604024 MTCL1Q9Y4B5 1905 aaKnown RBP0.53□□□□□ -2.33
CEP290-208ENST00000604024 SCN4AP35499 1836 aa0.53□□□□□ -2.33
CEP290-208ENST00000604024 PARP4Q9UKK3 1724 aaKnown RBP0.53□□□□□ -2.33
CEP290-208ENST00000604024 ARHGAP21Q5T5U3 1957 aa0.53□□□□□ -2.33
CEP290-208ENST00000604024 CPDO75976 1380 aa0.52□□□□□ -2.33
CEP290-208ENST00000604024 CCDC7Q96M83 1385 aa0.52□□□□□ -2.33
CEP290-208ENST00000604024 HELZ2Q9BYK8 2649 aaKnown RBP0.52□□□□□ -2.33
CEP290-208ENST00000604024 COL18A1P39060 1754 aa0.52□□□□□ -2.33
CEP290-208ENST00000604024 DUOX2Q9NRD8 1548 aa0.52□□□□□ -2.33
CEP290-208ENST00000604024 CCDC162PA2VCL2 907 aa0.52□□□□□ -2.33
CEP290-208ENST00000604024 A8MXE2 369 aa0.52□□□□□ -2.33
CEP290-208ENST00000604024 PPIP5K2O43314 1243 aa0.52□□□□□ -2.33
CEP290-208ENST00000604024 CSO75390 466 aaKnown RBP0.52□□□□□ -2.33
CEP290-208ENST00000604024 CISD3P0C7P0 127 aa0.52□□□□□ -2.33
CEP290-208ENST00000604024 HTR1EP28566 365 aa0.52□□□□□ -2.33
CEP290-208ENST00000604024 NBL1P41271 181 aa0.52□□□□□ -2.33
CEP290-208ENST00000604024 ZIC1Q15915 447 aa0.52□□□□□ -2.33
CEP290-208ENST00000604024 CAMK4Q16566 473 aa0.52□□□□□ -2.33
CEP290-208ENST00000604024 SHEQ5VZ18 495 aa0.52□□□□□ -2.33
CEP290-208ENST00000604024 DNM1P46Q6ZS02 220 aa0.52□□□□□ -2.33
CEP290-208ENST00000604024 KRT74Q7RTS7 529 aa0.52□□□□□ -2.33
CEP290-208ENST00000604024 CHDHQ8NE62 594 aaPredicted RBP0.52□□□□□ -2.33
CEP290-208ENST00000604024 PRCCQ92733 491 aaPredicted RBP0.52□□□□□ -2.33
CEP290-208ENST00000604024 SECISBP2LQ93073 1101 aaKnown RBP0.52□□□□□ -2.33
CEP290-208ENST00000604024 SLC25A38Q96DW6 304 aa0.52□□□□□ -2.33
CEP290-208ENST00000604024 PLEKHF1Q96S99 279 aa0.52□□□□□ -2.33
CEP290-208ENST00000604024 CPXM1Q96SM3 734 aa0.52□□□□□ -2.33
CEP290-208ENST00000604024 EML4Q9HC35 981 aaKnown RBP0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms