RNA–Protein interactions for RNA: ENST00000577598.5

BRIP1-202, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRIP1, Length 3,969 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-202ENST00000577598 SERINC1Q9NRX5 453 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 LHX3Q9UBR4 397 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 CLEC2DQ9UHP7 191 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 PHF11Q9UIL8 331 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 FAF1Q9UNN5 650 aaPredicted RBP4.8□□□□□ -1.64
BRIP1-202ENST00000577598 EXOSC1Q9Y3B2 195 aaKnown RBP4.8□□□□□ -1.64
BRIP1-202ENST00000577598 TTC21AQ8NDW8 1320 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 ATG2BQ96BY7 2078 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 CABIN1Q9Y6J0 2220 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 YY2O15391 372 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 NME2P1O60361 137 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 LDOC1O95751 146 aaPredicted RBP4.8□□□□□ -1.64
BRIP1-202ENST00000577598 SLC1A4P43007 532 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 GLP1RP43220 463 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 MAGEA2P43356 314 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 ZXDBP98169 803 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 KLF5Q13887 457 aaPredicted RBP4.8□□□□□ -1.64
BRIP1-202ENST00000577598 DGCR6Q14129 220 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 MOGQ16653 247 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 RNASE12Q5GAN4 147 aaKnown RBP4.8□□□□□ -1.64
BRIP1-202ENST00000577598 CTSL3PQ5NE16 218 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 LYSMD4Q5XG99 296 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 FAM151BQ6UXP7 276 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 LANCL3Q6ZV70 420 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 PNLDC1Q8NA58 520 aaKnown RBP4.8□□□□□ -1.64
BRIP1-202ENST00000577598 MFSD9Q8NBP5 474 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 MARCH1Q8TCQ1 289 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 DYNC2LI1Q8TCX1 351 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 RNF128Q8TEB7 428 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 SLC38A4Q969I6 547 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 MTERF1Q99551 399 aaKnown RBP4.8□□□□□ -1.64
BRIP1-202ENST00000577598 ANKRD60Q9BZ19 345 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 FGFR1OP2Q9NVK5 253 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 B9D1Q9UPM9 204 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 FER1L4A9Z1Z3 1794 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 TRAV26-1A0A087WT03 109 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 TMEM200CA6NKL6 621 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 C17orf105B2RV13 164 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 FAM157AC9JC47 383 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 H3BMQ9 156 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 COX5BP10606 129 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 CSNK1DP48730 415 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 RPS15AP62244 130 aaKnown RBP4.8□□□□□ -1.64
BRIP1-202ENST00000577598 ACCSLQ4AC99 568 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 C19orf54Q5BKX5 351 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 FAM102AQ5T9C2 384 aaPredicted RBP4.8□□□□□ -1.64
BRIP1-202ENST00000577598 RAET1EQ8TD07 263 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 SLC41A2Q96JW4 573 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 VSTM2LQ96N03 204 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 CLCC1Q96S66 551 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 FAM110AQ9BQ89 295 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 ACTR6Q9GZN1 396 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 CHRNA10Q9GZZ6 450 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 RBKSQ9H477 322 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 UVRAGQ9P2Y5 699 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 MBD2Q9UBB5 411 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 ABCD2Q9UBJ2 740 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 EPHA6Q9UF33 1036 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 PILRAQ9UKJ1 303 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 KCNIP3Q9Y2W7 256 aa4.8□□□□□ -1.64
BRIP1-202ENST00000577598 INSRP06213 1382 aa4.79□□□□□ -1.64
BRIP1-202ENST00000577598 CNTNAP1P78357 1384 aa4.79□□□□□ -1.64
BRIP1-202ENST00000577598 CUL9Q8IWT3 2517 aa4.79□□□□□ -1.64
BRIP1-202ENST00000577598 NISCHQ9Y2I1 1504 aa4.79□□□□□ -1.64
BRIP1-202ENST00000577598 ZAR1LA6NP61 321 aa4.79□□□□□ -1.64
BRIP1-202ENST00000577598 ZNF264O43296 627 aa4.79□□□□□ -1.64
BRIP1-202ENST00000577598 EFNA2O43921 213 aa4.79□□□□□ -1.64
BRIP1-202ENST00000577598 SNX3O60493 162 aa4.79□□□□□ -1.64
BRIP1-202ENST00000577598 CD3GP09693 182 aa4.79□□□□□ -1.64
BRIP1-202ENST00000577598 MRPS22P82650 360 aaKnown RBP4.79□□□□□ -1.64
BRIP1-202ENST00000577598 TIAL1Q01085 375 aaKnown RBP eCLIP4.79□□□□□ -1.64
BRIP1-202ENST00000577598 PAX5Q02548 391 aa4.79□□□□□ -1.64
BRIP1-202ENST00000577598 MTHFSDQ2M296 383 aaKnown RBP4.79□□□□□ -1.64
BRIP1-202ENST00000577598 VPS26BQ4G0F5 336 aa4.79□□□□□ -1.64
BRIP1-202ENST00000577598 BAIAP2L2Q6UXY1 529 aa4.79□□□□□ -1.64
BRIP1-202ENST00000577598 SHFQ7M4L6 423 aa4.79□□□□□ -1.64
BRIP1-202ENST00000577598 MRPL10Q7Z7H8 261 aaKnown RBP4.79□□□□□ -1.64
BRIP1-202ENST00000577598 NSL1Q96IY1 281 aa4.79□□□□□ -1.64
BRIP1-202ENST00000577598 TSC22D3Q99576 134 aa4.79□□□□□ -1.64
BRIP1-202ENST00000577598 CABLES2Q9BTV7 478 aa4.79□□□□□ -1.64
BRIP1-202ENST00000577598 TMEM208Q9BTX3 173 aa4.79□□□□□ -1.64
BRIP1-202ENST00000577598 TM2D2Q9BX73 214 aa4.79□□□□□ -1.64
BRIP1-202ENST00000577598 SLC19A3Q9BZV2 496 aa4.79□□□□□ -1.64
BRIP1-202ENST00000577598 GPR83Q9NYM4 423 aa4.79□□□□□ -1.64
BRIP1-202ENST00000577598 MAP3K15Q6ZN16 1313 aa4.79□□□□□ -1.64
BRIP1-202ENST00000577598 LILRA5A6NI73 299 aa4.79□□□□□ -1.64
BRIP1-202ENST00000577598 LRRC3CA6NJW4 275 aa4.79□□□□□ -1.64
BRIP1-202ENST00000577598 EIF4EBP3O60516 100 aaPredicted RBP4.79□□□□□ -1.64
BRIP1-202ENST00000577598 BAG4O95429 457 aaKnown RBP4.79□□□□□ -1.64
BRIP1-202ENST00000577598 GPX3P22352 226 aa4.79□□□□□ -1.64
BRIP1-202ENST00000577598 HMGCLP35914 325 aa4.79□□□□□ -1.64
BRIP1-202ENST00000577598 GPR1P46091 355 aa4.79□□□□□ -1.64
BRIP1-202ENST00000577598 SIRPAP78324 504 aa4.79□□□□□ -1.64
BRIP1-202ENST00000577598 DLK1P80370 383 aa4.79□□□□□ -1.64
BRIP1-202ENST00000577598 SYPL1Q16563 259 aa4.79□□□□□ -1.64
BRIP1-202ENST00000577598 ANKRD26P1Q6NSI1 321 aa4.79□□□□□ -1.64
BRIP1-202ENST00000577598 FBXL14Q8N1E6 418 aa4.79□□□□□ -1.64
BRIP1-202ENST00000577598 ABHD11Q8NFV4 315 aa4.79□□□□□ -1.64
BRIP1-202ENST00000577598 ZNF564Q8TBZ8 553 aaPredicted RBP4.79□□□□□ -1.64
BRIP1-202ENST00000577598 TMEM209Q96SK2 561 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms