RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 MCTS1Q9ULC4 181 aaKnown RBP16.32■□□□□ 0.2
PTPN21-208ENST00000556564 PKLRP30613 574 aa16.32■□□□□ 0.2
PTPN21-208ENST00000556564 CCR5P51681 352 aa16.32■□□□□ 0.2
PTPN21-208ENST00000556564 SPIN3Q5JUX0 258 aa16.32■□□□□ 0.2
PTPN21-208ENST00000556564 ASTLQ6HA08 431 aaPredicted RBP16.32■□□□□ 0.2
PTPN21-208ENST00000556564 OR51B6Q9H340 312 aa16.32■□□□□ 0.2
PTPN21-208ENST00000556564 MAGIXQ9H6Y5 334 aa16.32■□□□□ 0.2
PTPN21-208ENST00000556564 CCM2LQ9NUG4 571 aaPredicted RBP16.32■□□□□ 0.2
PTPN21-208ENST00000556564 NME4O00746 187 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 AP1G1O43747 822 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 IGHEP01854 428 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 GSTT2BP0CG30 244 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 AKIRIN2Q53H80 203 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 PIP5KL1Q5T9C9 394 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 MEDAGQ5VYS4 303 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 NARS2Q96I59 477 aaKnown RBP16.31■□□□□ 0.2
PTPN21-208ENST00000556564 BIRC8Q96P09 236 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 VN1R3Q9BXE9 311 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 EPHX3Q9H6B9 360 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 SBF2Q86WG5 1849 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 CDRT1O95170 752 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 ICAM2P13598 275 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 RRADP55042 308 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 APOFQ13790 326 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 VRK2Q86Y07 508 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 IQCF1Q8N6M8 205 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 BTBD2Q9BX70 525 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 SP140LQ9H930 580 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 hCG_1807616A0A1W2PRN6 198 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 TNFRSF10CO14798 259 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 CRISP1P54107 249 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 TAS2R43P59537 309 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 PIN1Q13526 163 aaPredicted RBP16.31■□□□□ 0.2
PTPN21-208ENST00000556564 METRNLQ641Q3 311 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 ZNF740Q8NDX6 193 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 SPRYD4Q8WW59 207 aaPredicted RBP16.31■□□□□ 0.2
PTPN21-208ENST00000556564 CST11Q9H112 138 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 SDR39U1Q9NRG7 319 aaPredicted RBP16.31■□□□□ 0.2
PTPN21-208ENST00000556564 CNIH4Q9P003 139 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 PLXNB2O15031 1838 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 KDM4BO94953 1096 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 SLCO2B1O94956 709 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 ETFBKMTQ8IXQ9 262 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 METTL4Q8N3J2 472 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 ANKRD10Q9NXR5 420 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 GPR52Q9Y2T5 361 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 LSM1O15116 133 aaKnown RBP16.31■□□□□ 0.2
PTPN21-208ENST00000556564 ABCB7O75027 752 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 B3GALT4O96024 378 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 MAOAP21397 527 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 DCTP40126 519 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 SSR4P51571 173 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 PDSS2Q86YH6 399 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 PSD4Q8NDX1 1056 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 SFXN5Q8TD22 340 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 ZFPM2Q8WW38 1151 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 RSC1A1Q92681 617 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 IRF2BPLQ9H1B7 796 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 C2orf42Q9NWW7 574 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 TEX10Q9NXF1 929 aaPredicted RBP16.31■□□□□ 0.2
PTPN21-208ENST00000556564 IL37Q9NZH6 218 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 PADI1Q9ULC6 663 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 SLC7A11Q9UPY5 501 aa16.31■□□□□ 0.2
PTPN21-208ENST00000556564 GGT3PA6NGU5 568 aa16.3■□□□□ 0.2
PTPN21-208ENST00000556564 AREL1O15033 823 aa16.3■□□□□ 0.2
PTPN21-208ENST00000556564 GPX3P22352 226 aa16.3■□□□□ 0.2
PTPN21-208ENST00000556564 GPLD1P80108 840 aa16.3■□□□□ 0.2
PTPN21-208ENST00000556564 TAP2Q03519 686 aa16.3■□□□□ 0.2
PTPN21-208ENST00000556564 RBPJQ06330 500 aa16.3■□□□□ 0.2
PTPN21-208ENST00000556564 SF3B4Q15427 424 aaKnown RBP eCLIP16.3■□□□□ 0.2
PTPN21-208ENST00000556564 LTB4RQ15722 352 aa16.3■□□□□ 0.2
PTPN21-208ENST00000556564 ALG10Q5BKT4 473 aa16.3■□□□□ 0.2
PTPN21-208ENST00000556564 OPN5Q6U736 354 aa16.3■□□□□ 0.2
PTPN21-208ENST00000556564 CAPSLQ8WWF8 208 aa16.3■□□□□ 0.2
PTPN21-208ENST00000556564 TMEM41AQ96HV5 264 aa16.3■□□□□ 0.2
PTPN21-208ENST00000556564 SAMD8Q96LT4 415 aa16.3■□□□□ 0.2
PTPN21-208ENST00000556564 BOKQ9UMX3 212 aaPredicted RBP16.3■□□□□ 0.2
PTPN21-208ENST00000556564 ZNF443Q9Y2A4 671 aaPredicted RBP16.3■□□□□ 0.2
PTPN21-208ENST00000556564 PCDHGA7Q9Y5G6 932 aa16.3■□□□□ 0.2
PTPN21-208ENST00000556564 FOXE1O00358 373 aaPredicted RBP16.3■□□□□ 0.2
PTPN21-208ENST00000556564 ARL6IP5O75915 188 aa16.3■□□□□ 0.2
PTPN21-208ENST00000556564 GADD45AP24522 165 aa16.3■□□□□ 0.2
PTPN21-208ENST00000556564 MAPK3P27361 379 aaPredicted RBP16.3■□□□□ 0.2
PTPN21-208ENST00000556564 PLEKHG7Q6ZR37 379 aa16.3■□□□□ 0.2
PTPN21-208ENST00000556564 NANOS1Q8WY41 292 aaKnown RBP16.3■□□□□ 0.2
PTPN21-208ENST00000556564 ING4Q9UNL4 249 aa16.3■□□□□ 0.2
PTPN21-208ENST00000556564 DHDHQ9UQ10 334 aa16.3■□□□□ 0.2
PTPN21-208ENST00000556564 OR5K3A6NET4 321 aa16.3■□□□□ 0.2
PTPN21-208ENST00000556564 ARPC4P59998 168 aa16.3■□□□□ 0.2
PTPN21-208ENST00000556564 KCNAB2Q13303 367 aa16.3■□□□□ 0.2
PTPN21-208ENST00000556564 SCGB2B2Q4G0G5 96 aa16.3■□□□□ 0.2
PTPN21-208ENST00000556564 NKAPLQ5M9Q1 402 aa16.3■□□□□ 0.2
PTPN21-208ENST00000556564 PLBD1Q6P4A8 553 aa16.3■□□□□ 0.2
PTPN21-208ENST00000556564 LHFPL3Q86UP9 236 aa16.3■□□□□ 0.2
PTPN21-208ENST00000556564 SYT14Q8NB59 555 aa16.3■□□□□ 0.2
PTPN21-208ENST00000556564 FER1L6-AS2Q96M78 137 aa16.3■□□□□ 0.2
PTPN21-208ENST00000556564 PCDHGB2Q9Y5G2 931 aa16.3■□□□□ 0.2
PTPN21-208ENST00000556564 PCDHGA6Q9Y5G7 932 aa16.3■□□□□ 0.2
PTPN21-208ENST00000556564 A0A1W2PPC4 97 aa16.3■□□□□ 0.2
PTPN21-208ENST00000556564 ARHGDIBP52566 201 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms