RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 TRIM2Q9C040 744 aa5.86□□□□□ -1.47
ATPAF1-209ENST00000529214 COPS7BQ9H9Q2 264 aaPredicted RBP5.86□□□□□ -1.47
ATPAF1-209ENST00000529214 LYRM4Q9HD34 91 aa5.86□□□□□ -1.47
ATPAF1-209ENST00000529214 TNFRSF12AQ9NP84 129 aa5.86□□□□□ -1.47
ATPAF1-209ENST00000529214 DNAJB12Q9NXW2 375 aaKnown RBP5.86□□□□□ -1.47
ATPAF1-209ENST00000529214 KLHL9Q9P2J3 617 aa5.86□□□□□ -1.47
ATPAF1-209ENST00000529214 VPS29Q9UBQ0 182 aa5.86□□□□□ -1.47
ATPAF1-209ENST00000529214 KCNN3Q9UGI6 736 aa5.86□□□□□ -1.47
ATPAF1-209ENST00000529214 COMMD3-BMI1R4GMX3 469 aa5.86□□□□□ -1.47
ATPAF1-209ENST00000529214 KMT2BQ9UMN6 2715 aaPredicted RBP5.86□□□□□ -1.47
ATPAF1-209ENST00000529214 PTPRQQ9UMZ3 2332 aa5.86□□□□□ -1.47
ATPAF1-209ENST00000529214 CCDC88CQ9P219 2028 aa5.86□□□□□ -1.47
ATPAF1-209ENST00000529214 EPG5Q9HCE0 2579 aa5.86□□□□□ -1.47
ATPAF1-209ENST00000529214 ATMQ13315 3056 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 IGHV1-45A0A0A0MS14 117 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 A0A0A6YYD5 115 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 TMEM120BA0PK00 339 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 PCP4L1A6NKN8 68 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 DBX1A6NMT0 343 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 SYT5O00445 386 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 CLDN4O14493 209 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 HNRNPRO43390 633 aaKnown RBP5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 PROM1O43490 865 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 GATCO43716 136 aaKnown RBP5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 B4GALT2O60909 372 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 CTNSO60931 367 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 EEDO75530 441 aaKnown RBP5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 SERPINB7O75635 380 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 CDC123O75794 336 aaPredicted RBP5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 CEACAM4O75871 244 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 HPP00738 406 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 THBDP07204 575 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 C8orf89P0DMQ9 161 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 UROSP10746 265 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 PTBP1P26599 531 aaKnown RBP eCLIP5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 SSR2P43308 183 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 RAP1GDS1P52306 607 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 NR1H2P55055 460 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 HTD2P86397 168 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 DAG1Q14118 895 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 RCN2Q14257 317 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 HABP2Q14520 560 aaPredicted RBP5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 NSDHLQ15738 373 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 DPY19L1Q2PZI1 675 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 UGT3A2Q3SY77 523 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 SPATS1Q496A3 300 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 C6orf163Q5TEZ5 329 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 QSOX2Q6ZRP7 698 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 ZCCHC23Q6ZST2 131 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 NDUFAF7Q7L592 441 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 TRIM46Q7Z4K8 759 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 CPEB2Q7Z5Q1 589 aaKnown RBP5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 ANKRD37Q7Z713 158 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 CUZD1Q86UP6 607 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 GPR180Q86V85 440 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 ZNF595Q8IYB9 648 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 CLYBLQ8N0X4 340 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 METTL4Q8N3J2 472 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 RNF152Q8N8N0 203 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 TMEM52Q8NDY8 209 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 CLHC1Q8NHS4 586 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 HTRA1Q92743 480 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 ABTB1Q969K4 478 aaPredicted RBP5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 DACT3Q96B18 629 aaPredicted RBP5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 C8orf44Q96CB5 159 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 IMMP1LQ96LU5 166 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 OPALINQ96PE5 141 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 HBEGFQ99075 208 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 SH3GL2Q99962 352 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 TRIM15Q9C019 465 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 C1orf21Q9H246 121 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 ZMAT4Q9H898 229 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 EML4Q9HC35 981 aaKnown RBP5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 MLXIPLQ9NP71 852 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 NECTIN3Q9NQS3 549 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 INTS9Q9NV88 658 aaKnown RBP5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 MS4A12Q9NXJ0 267 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 COQ3Q9NZJ6 369 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 ACTR3BQ9P1U1 418 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 ADAM29Q9UKF5 820 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 FBXW2Q9UKT8 454 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 SLC12A4Q9UP95 1085 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 SF3B6Q9Y3B4 125 aaKnown RBP5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 MMACHCQ9Y4U1 282 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 ASB4Q9Y574 426 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 CLDN16Q9Y5I7 305 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 PKD1L2Q7Z442 2459 aa5.85□□□□□ -1.47
ATPAF1-209ENST00000529214 IGKV3D-11A0A0A0MRZ8 115 aa5.84□□□□□ -1.47
ATPAF1-209ENST00000529214 NSG1A0A0A6YYJ2 146 aa5.84□□□□□ -1.47
ATPAF1-209ENST00000529214 A0A1W2PR48 441 aa5.84□□□□□ -1.47
ATPAF1-209ENST00000529214 ZSCAN5BA6NJL1 495 aa5.84□□□□□ -1.47
ATPAF1-209ENST00000529214 J3QL48 77 aa5.84□□□□□ -1.47
ATPAF1-209ENST00000529214 AZIN1O14977 448 aa5.84□□□□□ -1.47
ATPAF1-209ENST00000529214 NDUFA2O43678 99 aa5.84□□□□□ -1.47
ATPAF1-209ENST00000529214 ITM2AO43736 263 aa5.84□□□□□ -1.47
ATPAF1-209ENST00000529214 TMPRSS11DO60235 418 aa5.84□□□□□ -1.47
ATPAF1-209ENST00000529214 RBBP9O75884 186 aa5.84□□□□□ -1.47
ATPAF1-209ENST00000529214 GBAP04062 536 aa5.84□□□□□ -1.47
ATPAF1-209ENST00000529214 SERPINE1P05121 402 aa5.84□□□□□ -1.47
ATPAF1-209ENST00000529214 KLK1P06870 262 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms