RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 RPS4XP62701 263 aaKnown RBP1.08□□□□□ -2.24
CCDC93-209ENST00000488908 RPL32P62910 135 aaKnown RBP1.08□□□□□ -2.24
CCDC93-209ENST00000488908 IL9RQ01113 521 aa1.08□□□□□ -2.24
CCDC93-209ENST00000488908 OC90Q02509 493 aaPredicted RBP1.08□□□□□ -2.24
CCDC93-209ENST00000488908 PUDPQ08623 228 aa1.08□□□□□ -2.24
CCDC93-209ENST00000488908 SLAQ13239 276 aa1.08□□□□□ -2.24
CCDC93-209ENST00000488908 CAMK4Q16566 473 aa1.08□□□□□ -2.24
CCDC93-209ENST00000488908 MEP1BQ16820 701 aa1.08□□□□□ -2.24
CCDC93-209ENST00000488908 CHRFAM7AQ494W8 412 aa1.08□□□□□ -2.24
CCDC93-209ENST00000488908 OR2B11Q5JQS5 317 aa1.08□□□□□ -2.24
CCDC93-209ENST00000488908 TCHHL1Q5QJ38 904 aaPredicted RBP1.08□□□□□ -2.24
CCDC93-209ENST00000488908 KCTD11Q693B1 232 aa1.08□□□□□ -2.24
CCDC93-209ENST00000488908 HIST2H2AA3Q6FI13 130 aa1.08□□□□□ -2.24
CCDC93-209ENST00000488908 SHQ1Q6PI26 577 aaKnown RBP1.08□□□□□ -2.24
CCDC93-209ENST00000488908 C11orf88Q6PI97 169 aa1.08□□□□□ -2.24
CCDC93-209ENST00000488908 BRD3OSQ6XYD6 125 aa1.08□□□□□ -2.24
CCDC93-209ENST00000488908 ADAMTSL5Q6ZMM2 481 aa1.08□□□□□ -2.24
CCDC93-209ENST00000488908 RANBP3LQ86VV4 465 aaPredicted RBP1.08□□□□□ -2.24
CCDC93-209ENST00000488908 VSIG1Q86XK7 387 aa1.08□□□□□ -2.24
CCDC93-209ENST00000488908 C9orf40Q8IXQ3 194 aa1.08□□□□□ -2.24
CCDC93-209ENST00000488908 PYROXD2Q8N2H3 581 aa1.08□□□□□ -2.24
CCDC93-209ENST00000488908 SUMF2Q8NBJ7 301 aa1.08□□□□□ -2.24
CCDC93-209ENST00000488908 RELL2Q8NC24 303 aaPredicted RBP1.08□□□□□ -2.24
CCDC93-209ENST00000488908 ZBTB44Q8NCP5 570 aa1.08□□□□□ -2.24
CCDC93-209ENST00000488908 OR2L8Q8NGY9 312 aa1.08□□□□□ -2.24
CCDC93-209ENST00000488908 ERP27Q96DN0 273 aa1.08□□□□□ -2.24
CCDC93-209ENST00000488908 VPS39Q96JC1 886 aa1.08□□□□□ -2.24
CCDC93-209ENST00000488908 DDX50Q9BQ39 737 aaKnown RBP1.08□□□□□ -2.24
CCDC93-209ENST00000488908 NTMT1Q9BV86 223 aa1.08□□□□□ -2.24
CCDC93-209ENST00000488908 ACPTQ9BZG2 426 aa1.08□□□□□ -2.24
CCDC93-209ENST00000488908 ZNF350Q9GZX5 532 aa1.08□□□□□ -2.24
CCDC93-209ENST00000488908 TSPYL1Q9H0U9 437 aa1.08□□□□□ -2.24
CCDC93-209ENST00000488908 ALG9Q9H6U8 611 aa1.08□□□□□ -2.24
CCDC93-209ENST00000488908 DCLRE1BQ9H816 532 aa1.08□□□□□ -2.24
CCDC93-209ENST00000488908 DDX28Q9NUL7 540 aaKnown RBP1.08□□□□□ -2.24
CCDC93-209ENST00000488908 MARCH5Q9NX47 278 aa1.08□□□□□ -2.24
CCDC93-209ENST00000488908 GIMAP2Q9UG22 337 aa1.08□□□□□ -2.24
CCDC93-209ENST00000488908 FOXA2Q9Y261 457 aaPredicted RBP1.08□□□□□ -2.24
CCDC93-209ENST00000488908 MRPS2Q9Y399 296 aaKnown RBP1.08□□□□□ -2.24
CCDC93-209ENST00000488908 SLCO1B1Q9Y6L6 691 aa1.08□□□□□ -2.24
CCDC93-209ENST00000488908 KIF7Q2M1P5 1343 aa1.08□□□□□ -2.24
CCDC93-209ENST00000488908 TENM1Q9UKZ4 2725 aa1.07□□□□□ -2.24
CCDC93-209ENST00000488908 A0A0J9YVX5 310 aa1.07□□□□□ -2.24
CCDC93-209ENST00000488908 NPIPA2E9PIF3 369 aa1.07□□□□□ -2.24
CCDC93-209ENST00000488908 PDLIM1O00151 329 aa1.07□□□□□ -2.24
CCDC93-209ENST00000488908 CACNB4O00305 520 aaPredicted RBP1.07□□□□□ -2.24
CCDC93-209ENST00000488908 RANBP6O60518 1105 aaKnown RBP1.07□□□□□ -2.24
CCDC93-209ENST00000488908 TBL1XO60907 577 aa1.07□□□□□ -2.24
CCDC93-209ENST00000488908 GMNNO75496 209 aa1.07□□□□□ -2.24
CCDC93-209ENST00000488908 REC8O95072 547 aa1.07□□□□□ -2.24
CCDC93-209ENST00000488908 C6orf47O95873 294 aa1.07□□□□□ -2.24
CCDC93-209ENST00000488908 HIST1H2AGP0C0S8 130 aaPredicted RBP1.07□□□□□ -2.24
CCDC93-209ENST00000488908 B4GALT1P15291 398 aa1.07□□□□□ -2.24
CCDC93-209ENST00000488908 FERP16591 822 aa1.07□□□□□ -2.24
CCDC93-209ENST00000488908 IGFBP3P17936 291 aaPredicted RBP1.07□□□□□ -2.24
CCDC93-209ENST00000488908 SDC1P18827 310 aa1.07□□□□□ -2.24
CCDC93-209ENST00000488908 HTR1EP28566 365 aa1.07□□□□□ -2.24
CCDC93-209ENST00000488908 HAND2P61296 217 aa1.07□□□□□ -2.24
CCDC93-209ENST00000488908 ASIC1P78348 528 aa1.07□□□□□ -2.24
CCDC93-209ENST00000488908 TSPY1Q01534 308 aa1.07□□□□□ -2.24
CCDC93-209ENST00000488908 EIF2B1Q14232 305 aaKnown RBP1.07□□□□□ -2.24
CCDC93-209ENST00000488908 GGTLC2Q14390 218 aa1.07□□□□□ -2.24
CCDC93-209ENST00000488908 EXOSC7Q15024 291 aaKnown RBP1.07□□□□□ -2.24
CCDC93-209ENST00000488908 OR5M10Q6IEU7 315 aa1.07□□□□□ -2.24
CCDC93-209ENST00000488908 PRR5LQ6MZQ0 368 aa1.07□□□□□ -2.24
CCDC93-209ENST00000488908 GBP6Q6ZN66 633 aa1.07□□□□□ -2.24
CCDC93-209ENST00000488908 FRA10AC1Q70Z53 315 aa1.07□□□□□ -2.24
CCDC93-209ENST00000488908 PIWIL3Q7Z3Z3 882 aaKnown RBP1.07□□□□□ -2.24
CCDC93-209ENST00000488908 PPP1R27Q86WC6 154 aa1.07□□□□□ -2.24
CCDC93-209ENST00000488908 HIST2H2ABQ8IUE6 130 aaPredicted RBP1.07□□□□□ -2.24
CCDC93-209ENST00000488908 STHQ8IWL8 128 aa1.07□□□□□ -2.24
CCDC93-209ENST00000488908 ALLCQ8N6M5 410 aa1.07□□□□□ -2.24
CCDC93-209ENST00000488908 COLGALT1Q8NBJ5 622 aa1.07□□□□□ -2.24
CCDC93-209ENST00000488908 OR52J3Q8NH60 311 aa1.07□□□□□ -2.24
CCDC93-209ENST00000488908 SLC22A8Q8TCC7 542 aa1.07□□□□□ -2.24
CCDC93-209ENST00000488908 TAF4BQ92750 862 aa1.07□□□□□ -2.24
CCDC93-209ENST00000488908 HIST1H2ACQ93077 130 aa1.07□□□□□ -2.24
CCDC93-209ENST00000488908 LHX4Q969G2 390 aa1.07□□□□□ -2.24
CCDC93-209ENST00000488908 NEIL2Q969S2 332 aa1.07□□□□□ -2.24
CCDC93-209ENST00000488908 RAB39BQ96DA2 213 aa1.07□□□□□ -2.24
CCDC93-209ENST00000488908 TSPAN18Q96SJ8 248 aa1.07□□□□□ -2.24
CCDC93-209ENST00000488908 MBOAT4Q96T53 435 aa1.07□□□□□ -2.24
CCDC93-209ENST00000488908 PLA2G2FQ9BZM2 168 aa1.07□□□□□ -2.24
CCDC93-209ENST00000488908 ABCB8Q9NUT2 735 aa1.07□□□□□ -2.24
CCDC93-209ENST00000488908 LHX3Q9UBR4 397 aa1.07□□□□□ -2.24
CCDC93-209ENST00000488908 NARFQ9UHQ1 456 aa1.07□□□□□ -2.24
CCDC93-209ENST00000488908 PURGQ9UJV8 347 aaKnown RBP1.07□□□□□ -2.24
CCDC93-209ENST00000488908 BARX2Q9UMQ3 279 aaPredicted RBP1.07□□□□□ -2.24
CCDC93-209ENST00000488908 DHRS7Q9Y394 339 aa1.07□□□□□ -2.24
CCDC93-209ENST00000488908 LRIT2A6NDA9 550 aa1.06□□□□□ -2.24
CCDC93-209ENST00000488908 DHRS7CA6NNS2 312 aa1.06□□□□□ -2.24
CCDC93-209ENST00000488908 RIPK2O43353 540 aa1.06□□□□□ -2.24
CCDC93-209ENST00000488908 TIMM44O43615 452 aa1.06□□□□□ -2.24
CCDC93-209ENST00000488908 BUB1O43683 1085 aa1.06□□□□□ -2.24
CCDC93-209ENST00000488908 AIREO43918 545 aa1.06□□□□□ -2.24
CCDC93-209ENST00000488908 RBBP9O75884 186 aa1.06□□□□□ -2.24
CCDC93-209ENST00000488908 ECDO95905 644 aaPredicted RBP1.06□□□□□ -2.24
CCDC93-209ENST00000488908 CENPBP07199 599 aaPredicted RBP1.06□□□□□ -2.24
CCDC93-209ENST00000488908 STSP08842 583 aa1.06□□□□□ -2.24
CCDC93-209ENST00000488908 SERPINB6P35237 376 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms