RNA–Protein interactions for RNA: ENST00000478061.5

RBM28-204, Transcript of RNA binding motif protein 28, human

TSL 3

Gene RBM28, Length 932 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM28-204	ENST00000478061	MTDH	Q86UE4	582 aa	Known RBP	11.74	□□□□□ -0.53
RBM28-204	ENST00000478061	RETREG3	Q86VR2	466 aa		11.74	□□□□□ -0.53
RBM28-204	ENST00000478061	RNF130	Q86XS8	419 aa		11.74	□□□□□ -0.53
RBM28-204	ENST00000478061	ZFP62	Q8NB50	900 aa	Predicted RBP	11.74	□□□□□ -0.53
RBM28-204	ENST00000478061	FAM98A	Q8NCA5	519 aa	Known RBP	11.74	□□□□□ -0.53
RBM28-204	ENST00000478061	CPT1C	Q8TCG5	803 aa		11.74	□□□□□ -0.53
RBM28-204	ENST00000478061	ZFP90	Q8TF47	636 aa		11.74	□□□□□ -0.53
RBM28-204	ENST00000478061	AURKB	Q96GD4	344 aa	Predicted RBP	11.74	□□□□□ -0.53
RBM28-204	ENST00000478061	FRMD6	Q96NE9	622 aa		11.74	□□□□□ -0.53
RBM28-204	ENST00000478061	CCT8L2	Q96SF2	557 aa		11.74	□□□□□ -0.53
RBM28-204	ENST00000478061	BARD1	Q99728	777 aa	Known RBP	11.74	□□□□□ -0.53
RBM28-204	ENST00000478061	FAM173A	Q9BQD7	235 aa		11.74	□□□□□ -0.53
RBM28-204	ENST00000478061	ANGPTL4	Q9BY76	406 aa		11.74	□□□□□ -0.53
RBM28-204	ENST00000478061	OR51I1	Q9H343	314 aa		11.74	□□□□□ -0.53
RBM28-204	ENST00000478061	ASF1B	Q9NVP2	202 aa		11.74	□□□□□ -0.53
RBM28-204	ENST00000478061	FBXO34	Q9NWN3	711 aa		11.74	□□□□□ -0.53
RBM28-204	ENST00000478061	SLC25A37	Q9NYZ2	338 aa		11.74	□□□□□ -0.53
RBM28-204	ENST00000478061	FLRT3	Q9NZU0	649 aa		11.74	□□□□□ -0.53
RBM28-204	ENST00000478061	SLAMF8	Q9P0V8	285 aa		11.74	□□□□□ -0.53
RBM28-204	ENST00000478061	ARMCX1	Q9P291	453 aa		11.74	□□□□□ -0.53
RBM28-204	ENST00000478061	LEF1	Q9UJU2	399 aa	Predicted RBP	11.74	□□□□□ -0.53
RBM28-204	ENST00000478061	MRTO4	Q9UKD2	239 aa	Known RBP	11.74	□□□□□ -0.53
RBM28-204	ENST00000478061	CAPN7	Q9Y6W3	813 aa		11.74	□□□□□ -0.53
RBM28-204	ENST00000478061	NBAS	A2RRP1	2371 aa		11.73	□□□□□ -0.53
RBM28-204	ENST00000478061	PRAMEF25	A6NGN4	478 aa		11.73	□□□□□ -0.53
RBM28-204	ENST00000478061	DUXA	A6NLW8	204 aa		11.73	□□□□□ -0.53
RBM28-204	ENST00000478061	ASNA1	O43681	348 aa		11.73	□□□□□ -0.53
RBM28-204	ENST00000478061	SLC28A2	O43868	658 aa		11.73	□□□□□ -0.53
RBM28-204	ENST00000478061	ICOSLG	O75144	302 aa		11.73	□□□□□ -0.53
RBM28-204	ENST00000478061	KRT75	O95678	551 aa		11.73	□□□□□ -0.53
RBM28-204	ENST00000478061	OR12D1	P0DN82	309 aa		11.73	□□□□□ -0.53
RBM28-204	ENST00000478061	RFC3	P40938	356 aa		11.73	□□□□□ -0.53
RBM28-204	ENST00000478061	PTGDS	P41222	190 aa		11.73	□□□□□ -0.53
RBM28-204	ENST00000478061	RFX3	P48380	749 aa		11.73	□□□□□ -0.53
RBM28-204	ENST00000478061	DNASE1L1	P49184	302 aa		11.73	□□□□□ -0.53
RBM28-204	ENST00000478061	KHK	P50053	298 aa		11.73	□□□□□ -0.53
RBM28-204	ENST00000478061	MVD	P53602	400 aa		11.73	□□□□□ -0.53
RBM28-204	ENST00000478061	PSMD4	P55036	377 aa	Known RBP	11.73	□□□□□ -0.53
RBM28-204	ENST00000478061	TLE1	Q04724	770 aa		11.73	□□□□□ -0.53
RBM28-204	ENST00000478061	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
RBM28-204	ENST00000478061	TBCEL	Q5QJ74	424 aa		11.73	□□□□□ -0.53
RBM28-204	ENST00000478061	COX20	Q5RI15	118 aa		11.73	□□□□□ -0.53
RBM28-204	ENST00000478061	CCNJ	Q5T5M9	372 aa		11.73	□□□□□ -0.53
RBM28-204	ENST00000478061	ZNF324B	Q6AW86	544 aa	Predicted RBP	11.73	□□□□□ -0.53
RBM28-204	ENST00000478061	TMEM81	Q6P7N7	255 aa		11.73	□□□□□ -0.53
RBM28-204	ENST00000478061	FIGNL1	Q6PIW4	674 aa		11.73	□□□□□ -0.53
RBM28-204	ENST00000478061	DLEU7	Q6UYE1	221 aa		11.73	□□□□□ -0.53
RBM28-204	ENST00000478061	GALNT10	Q86SR1	603 aa		11.73	□□□□□ -0.53
RBM28-204	ENST00000478061	MSRB3	Q8IXL7	192 aa		11.73	□□□□□ -0.53
RBM28-204	ENST00000478061	DPP10	Q8N608	796 aa		11.73	□□□□□ -0.53
RBM28-204	ENST00000478061	POGLUT1	Q8NBL1	392 aa		11.73	□□□□□ -0.53
RBM28-204	ENST00000478061	DNAJB8	Q8NHS0	232 aa		11.73	□□□□□ -0.53
RBM28-204	ENST00000478061	PNPT1	Q8TCS8	783 aa	Known RBP	11.73	□□□□□ -0.53
RBM28-204	ENST00000478061	RNF138	Q8WVD3	245 aa		11.73	□□□□□ -0.53
RBM28-204	ENST00000478061	RAB8B	Q92930	207 aa		11.73	□□□□□ -0.53
RBM28-204	ENST00000478061	TMCO6	Q96DC7	493 aa		11.73	□□□□□ -0.53
RBM28-204	ENST00000478061	ZNF462	Q96JM2	2506 aa		11.73	□□□□□ -0.53
RBM28-204	ENST00000478061	DOHH	Q9BU89	302 aa		11.73	□□□□□ -0.53
RBM28-204	ENST00000478061	MYLK2	Q9H1R3	596 aa		11.73	□□□□□ -0.53
RBM28-204	ENST00000478061	METTL7A	Q9H8H3	244 aa		11.73	□□□□□ -0.53
RBM28-204	ENST00000478061	TPT1P8	Q9HAU6	139 aa		11.73	□□□□□ -0.53
RBM28-204	ENST00000478061	TUBA8	Q9NY65	449 aa	Predicted RBP	11.73	□□□□□ -0.53
RBM28-204	ENST00000478061	ARL2BP	Q9Y2Y0	163 aa		11.73	□□□□□ -0.53
RBM28-204	ENST00000478061	NDUFAF1	Q9Y375	327 aa		11.73	□□□□□ -0.53
RBM28-204	ENST00000478061	PCDHGB3	Q9Y5G1	929 aa		11.73	□□□□□ -0.53
RBM28-204	ENST00000478061	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	11.73	□□□□□ -0.53
RBM28-204	ENST00000478061	TRBV5-3	A0A0A0MS03	114 aa		11.72	□□□□□ -0.53
RBM28-204	ENST00000478061	HMGN4	O00479	90 aa		11.72	□□□□□ -0.53
RBM28-204	ENST00000478061	FBP2	O00757	339 aa		11.72	□□□□□ -0.53
RBM28-204	ENST00000478061	ANGPT2	O15123	496 aa		11.72	□□□□□ -0.53
RBM28-204	ENST00000478061	HS6ST1	O60243	411 aa		11.72	□□□□□ -0.53
RBM28-204	ENST00000478061	FADS1	O60427	444 aa		11.72	□□□□□ -0.53
RBM28-204	ENST00000478061	TRIM3	O75382	744 aa	Predicted RBP	11.72	□□□□□ -0.53
RBM28-204	ENST00000478061	UNC5C	O95185	931 aa		11.72	□□□□□ -0.53
RBM28-204	ENST00000478061	SNX4	O95219	450 aa		11.72	□□□□□ -0.53
RBM28-204	ENST00000478061	UTS2	O95399	124 aa		11.72	□□□□□ -0.53
RBM28-204	ENST00000478061	AGR2	O95994	175 aa		11.72	□□□□□ -0.53
RBM28-204	ENST00000478061	CRYAB	P02511	175 aa	Known RBP	11.72	□□□□□ -0.53
RBM28-204	ENST00000478061	MST1	P26927	711 aa		11.72	□□□□□ -0.53
RBM28-204	ENST00000478061	LCN1	P31025	176 aa		11.72	□□□□□ -0.53
RBM28-204	ENST00000478061	MAGEA8	P43361	318 aa		11.72	□□□□□ -0.53
RBM28-204	ENST00000478061	KCNJ2	P63252	427 aa		11.72	□□□□□ -0.53
RBM28-204	ENST00000478061	TXNL4A	P83876	142 aa	Known RBP	11.72	□□□□□ -0.53
RBM28-204	ENST00000478061	SNTA1	Q13424	505 aa		11.72	□□□□□ -0.53
RBM28-204	ENST00000478061	GRAMD1B	Q3KR37	738 aa		11.72	□□□□□ -0.53
RBM28-204	ENST00000478061	DCST2	Q5T1A1	773 aa		11.72	□□□□□ -0.53
RBM28-204	ENST00000478061	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	11.72	□□□□□ -0.53
RBM28-204	ENST00000478061	HEPHL1	Q6MZM0	1159 aa		11.72	□□□□□ -0.53
RBM28-204	ENST00000478061	SLC30A6	Q6NXT4	461 aa		11.72	□□□□□ -0.53
RBM28-204	ENST00000478061	ANGPTL8	Q6UXH0	198 aa		11.72	□□□□□ -0.53
RBM28-204	ENST00000478061	SNX32	Q86XE0	403 aa		11.72	□□□□□ -0.53
RBM28-204	ENST00000478061	CHDH	Q8NE62	594 aa	Predicted RBP	11.72	□□□□□ -0.53
RBM28-204	ENST00000478061	FAR1	Q8WVX9	515 aa		11.72	□□□□□ -0.53
RBM28-204	ENST00000478061	XAGE5	Q8WWM1	108 aa		11.72	□□□□□ -0.53
RBM28-204	ENST00000478061	NR4A3	Q92570	626 aa		11.72	□□□□□ -0.53
RBM28-204	ENST00000478061	SDF2	Q99470	211 aa		11.72	□□□□□ -0.53
RBM28-204	ENST00000478061	G6PC3	Q9BUM1	346 aa		11.72	□□□□□ -0.53
RBM28-204	ENST00000478061	CCDC106	Q9BWC9	280 aa		11.72	□□□□□ -0.53
RBM28-204	ENST00000478061	OSBPL11	Q9BXB4	747 aa		11.72	□□□□□ -0.53
RBM28-204	ENST00000478061	GALNT9	Q9HCQ5	603 aa		11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 38 ms