RNA–Protein interactions for RNA: ENST00000461743.1

VPS52-213, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 3

Gene VPS52, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-213ENST00000461743 SLC19A2O60779 497 aa10.86□□□□□ -0.67
VPS52-213ENST00000461743 EDF1O60869 148 aaKnown RBP10.86□□□□□ -0.67
VPS52-213ENST00000461743 SCN2BO60939 215 aa10.86□□□□□ -0.67
VPS52-213ENST00000461743 HMGN2P05204 90 aaKnown RBP10.86□□□□□ -0.67
VPS52-213ENST00000461743 IL6P05231 212 aa10.86□□□□□ -0.67
VPS52-213ENST00000461743 NGFRP08138 427 aa10.86□□□□□ -0.67
VPS52-213ENST00000461743 ALOX5P09917 674 aa10.86□□□□□ -0.67
VPS52-213ENST00000461743 S100A3P33764 101 aa10.86□□□□□ -0.67
VPS52-213ENST00000461743 EVI2BP34910 448 aa10.86□□□□□ -0.67
VPS52-213ENST00000461743 RFC3P40938 356 aa10.86□□□□□ -0.67
VPS52-213ENST00000461743 CA7P43166 264 aa10.86□□□□□ -0.67
VPS52-213ENST00000461743 MASP1P48740 699 aa10.86□□□□□ -0.67
VPS52-213ENST00000461743 WNT3P56703 355 aa10.86□□□□□ -0.67
VPS52-213ENST00000461743 KCNK10P57789 538 aa10.86□□□□□ -0.67
VPS52-213ENST00000461743 STX1BP61266 288 aa10.86□□□□□ -0.67
VPS52-213ENST00000461743 HBA1P69905 142 aa10.86□□□□□ -0.67
VPS52-213ENST00000461743 TP53BP2Q13625 1128 aa10.86□□□□□ -0.67
VPS52-213ENST00000461743 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.86□□□□□ -0.67
VPS52-213ENST00000461743 FAM174BQ3ZCQ3 159 aa10.86□□□□□ -0.67
VPS52-213ENST00000461743 SPDYE7PQ495Y7 208 aa10.86□□□□□ -0.67
VPS52-213ENST00000461743 SPANXN4Q5MJ08 99 aa10.86□□□□□ -0.67
VPS52-213ENST00000461743 MIER2Q8N344 545 aa10.86□□□□□ -0.67
VPS52-213ENST00000461743 TMEM251Q8N6I4 163 aa10.86□□□□□ -0.67
VPS52-213ENST00000461743 TRIML2Q8N7C3 387 aa10.86□□□□□ -0.67
VPS52-213ENST00000461743 GOT1L1Q8NHS2 421 aaPredicted RBP10.86□□□□□ -0.67
VPS52-213ENST00000461743 PRR7Q8TB68 274 aa10.86□□□□□ -0.67
VPS52-213ENST00000461743 CCDC115Q96NT0 180 aa10.86□□□□□ -0.67
VPS52-213ENST00000461743 OR52B2Q96RD2 323 aa10.86□□□□□ -0.67
VPS52-213ENST00000461743 ADOQ96SZ5 270 aa10.86□□□□□ -0.67
VPS52-213ENST00000461743 G6PC3Q9BUM1 346 aa10.86□□□□□ -0.67
VPS52-213ENST00000461743 ACTRT3Q9BYD9 372 aa10.86□□□□□ -0.67
VPS52-213ENST00000461743 TSPAN10Q9H1Z9 355 aaPredicted RBP10.86□□□□□ -0.67
VPS52-213ENST00000461743 UBQLN3Q9H347 655 aa10.86□□□□□ -0.67
VPS52-213ENST00000461743 ACKR4Q9NPB9 350 aa10.86□□□□□ -0.67
VPS52-213ENST00000461743 GPATCH2Q9NW75 528 aa10.86□□□□□ -0.67
VPS52-213ENST00000461743 FAF1Q9UNN5 650 aaPredicted RBP10.86□□□□□ -0.67
VPS52-213ENST00000461743 C15orf41Q9Y2V0 281 aa10.86□□□□□ -0.67
VPS52-213ENST00000461743 SNX8Q9Y5X2 465 aa10.86□□□□□ -0.67
VPS52-213ENST00000461743 ICE1Q9Y2F5 2266 aa10.86□□□□□ -0.67
VPS52-213ENST00000461743 RNF103-CHMP3A0A140T963 221 aa10.85□□□□□ -0.67
VPS52-213ENST00000461743 A0A1B0GVC2 190 aa10.85□□□□□ -0.67
VPS52-213ENST00000461743 FAM166BA8MTA8 275 aa10.85□□□□□ -0.67
VPS52-213ENST00000461743 AQP7O14520 342 aa10.85□□□□□ -0.67
VPS52-213ENST00000461743 SLC22A3O75751 556 aa10.85□□□□□ -0.67
VPS52-213ENST00000461743 AGR2O95994 175 aa10.85□□□□□ -0.67
VPS52-213ENST00000461743 AK1P00568 194 aa10.85□□□□□ -0.67
VPS52-213ENST00000461743 PGRP06401 933 aa10.85□□□□□ -0.67
VPS52-213ENST00000461743 ACP2P11117 423 aa10.85□□□□□ -0.67
VPS52-213ENST00000461743 ABOP16442 354 aa10.85□□□□□ -0.67
VPS52-213ENST00000461743 EFNA1P20827 205 aaPredicted RBP10.85□□□□□ -0.67
VPS52-213ENST00000461743 UQCRC2P22695 453 aa10.85□□□□□ -0.67
VPS52-213ENST00000461743 SOAT1P35610 550 aa10.85□□□□□ -0.67
VPS52-213ENST00000461743 PTGDSP41222 190 aa10.85□□□□□ -0.67
VPS52-213ENST00000461743 MAGEA5P43359 124 aa10.85□□□□□ -0.67
VPS52-213ENST00000461743 MAGEA8P43361 318 aa10.85□□□□□ -0.67
VPS52-213ENST00000461743 CLK3P49761 638 aaKnown RBP10.85□□□□□ -0.67
VPS52-213ENST00000461743 ATP4BP51164 291 aa10.85□□□□□ -0.67
VPS52-213ENST00000461743 PRKAG1P54619 331 aa10.85□□□□□ -0.67
VPS52-213ENST00000461743 AQP5P55064 265 aa10.85□□□□□ -0.67
VPS52-213ENST00000461743 UFM1P61960 85 aa10.85□□□□□ -0.67
VPS52-213ENST00000461743 GAB1Q13480 694 aa10.85□□□□□ -0.67
VPS52-213ENST00000461743 UBAP2LQ14157 1087 aaKnown RBP10.85□□□□□ -0.67
VPS52-213ENST00000461743 LASP1Q14847 261 aaKnown RBP10.85□□□□□ -0.67
VPS52-213ENST00000461743 EIF2S3LQ2VIR3 472 aaKnown RBP10.85□□□□□ -0.67
VPS52-213ENST00000461743 TIGD3Q6B0B8 471 aa10.85□□□□□ -0.67
VPS52-213ENST00000461743 CHERPQ8IWX8 916 aaKnown RBP10.85□□□□□ -0.67
VPS52-213ENST00000461743 COX18Q8N8Q8 333 aa10.85□□□□□ -0.67
VPS52-213ENST00000461743 OR4N2Q8NGD1 307 aa10.85□□□□□ -0.67
VPS52-213ENST00000461743 OR52N2Q8NGI0 321 aa10.85□□□□□ -0.67
VPS52-213ENST00000461743 OR4A15Q8NGL6 344 aa10.85□□□□□ -0.67
VPS52-213ENST00000461743 OR1J4Q8NGS1 313 aa10.85□□□□□ -0.67
VPS52-213ENST00000461743 MIPOL1Q8TD10 442 aa10.85□□□□□ -0.67
VPS52-213ENST00000461743 GPR151Q8TDV0 419 aa10.85□□□□□ -0.67
VPS52-213ENST00000461743 SLC9A6Q92581 669 aa10.85□□□□□ -0.67
VPS52-213ENST00000461743 JADE3Q92613 823 aa10.85□□□□□ -0.67
VPS52-213ENST00000461743 RELTQ969Z4 430 aa10.85□□□□□ -0.67
VPS52-213ENST00000461743 EFHD2Q96C19 240 aaPredicted RBP10.85□□□□□ -0.67
VPS52-213ENST00000461743 RMND5BQ96G75 393 aaPredicted RBP10.85□□□□□ -0.67
VPS52-213ENST00000461743 SLC35G5Q96KT7 338 aa10.85□□□□□ -0.67
VPS52-213ENST00000461743 NODALQ96S42 347 aa10.85□□□□□ -0.67
VPS52-213ENST00000461743 BTBD2Q9BX70 525 aa10.85□□□□□ -0.67
VPS52-213ENST00000461743 PIGUQ9H490 435 aa10.85□□□□□ -0.67
VPS52-213ENST00000461743 CCDC134Q9H6E4 229 aa10.85□□□□□ -0.67
VPS52-213ENST00000461743 MRGBPQ9NV56 204 aa10.85□□□□□ -0.67
VPS52-213ENST00000461743 OSGIN2Q9Y236 505 aa10.85□□□□□ -0.67
VPS52-213ENST00000461743 HEATR5AQ86XA9 2040 aa10.85□□□□□ -0.67
VPS52-213ENST00000461743 KIAA1549Q9HCM3 1950 aa10.85□□□□□ -0.67
VPS52-213ENST00000461743 DOCK7Q96N67 2140 aa10.84□□□□□ -0.67
VPS52-213ENST00000461743 DUXAA6NLW8 204 aa10.84□□□□□ -0.67
VPS52-213ENST00000461743 PRRG2O14669 202 aa10.84□□□□□ -0.67
VPS52-213ENST00000461743 BCKDKO14874 412 aa10.84□□□□□ -0.67
VPS52-213ENST00000461743 CDC40O60508 579 aaKnown RBP eCLIP10.84□□□□□ -0.67
VPS52-213ENST00000461743 ICOSLGO75144 302 aa10.84□□□□□ -0.67
VPS52-213ENST00000461743 AGFG2O95081 481 aa10.84□□□□□ -0.67
VPS52-213ENST00000461743 HPNP05981 417 aa10.84□□□□□ -0.67
VPS52-213ENST00000461743 CYP4B1P13584 511 aa10.84□□□□□ -0.67
VPS52-213ENST00000461743 GDF1P27539 372 aa10.84□□□□□ -0.67
VPS52-213ENST00000461743 PTPN6P29350 595 aa10.84□□□□□ -0.67
VPS52-213ENST00000461743 GABRA3P34903 492 aa10.84□□□□□ -0.67
VPS52-213ENST00000461743 PTGS2P35354 604 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms