RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 COL6A5A8TX70 2615 aa16.19■□□□□ 0.18
CHCHD3-203ENST00000448878 CCDC189A1A4V9 331 aa16.19■□□□□ 0.18
CHCHD3-203ENST00000448878 OR2M5A3KFT3 312 aa16.19■□□□□ 0.18
CHCHD3-203ENST00000448878 B4DXG7 233 aa16.19■□□□□ 0.18
CHCHD3-203ENST00000448878 PDYNP01213 254 aa16.19■□□□□ 0.18
CHCHD3-203ENST00000448878 ALDOAP04075 364 aaKnown RBP16.19■□□□□ 0.18
CHCHD3-203ENST00000448878 PAX1P15863 534 aa16.19■□□□□ 0.18
CHCHD3-203ENST00000448878 PPP3CBP16298 524 aa16.19■□□□□ 0.18
CHCHD3-203ENST00000448878 TYK2P29597 1187 aa16.19■□□□□ 0.18
CHCHD3-203ENST00000448878 EVI2BP34910 448 aa16.19■□□□□ 0.18
CHCHD3-203ENST00000448878 GAS1P54826 345 aa16.19■□□□□ 0.18
CHCHD3-203ENST00000448878 RPS4XP62701 263 aaKnown RBP16.19■□□□□ 0.18
CHCHD3-203ENST00000448878 KRTAP1-1Q07627 177 aa16.19■□□□□ 0.18
CHCHD3-203ENST00000448878 CAPRIN1Q14444 709 aaKnown RBP16.19■□□□□ 0.18
CHCHD3-203ENST00000448878 METTL2BQ6P1Q9 378 aaKnown RBP16.19■□□□□ 0.18
CHCHD3-203ENST00000448878 NPSR1Q6W5P4 371 aa16.19■□□□□ 0.18
CHCHD3-203ENST00000448878 CCDC91Q7Z6B0 441 aa16.19■□□□□ 0.18
CHCHD3-203ENST00000448878 C1orf52Q8N6N3 182 aaKnown RBP16.19■□□□□ 0.18
CHCHD3-203ENST00000448878 OR2M3Q8NG83 312 aa16.19■□□□□ 0.18
CHCHD3-203ENST00000448878 UHMK1Q8TAS1 419 aaKnown RBP16.19■□□□□ 0.18
CHCHD3-203ENST00000448878 TMEM158Q8WZ71 300 aa16.19■□□□□ 0.18
CHCHD3-203ENST00000448878 GTPBP3Q969Y2 492 aaKnown RBP16.19■□□□□ 0.18
CHCHD3-203ENST00000448878 ZNF681Q96N22 645 aa16.19■□□□□ 0.18
CHCHD3-203ENST00000448878 ERP44Q9BS26 406 aa16.19■□□□□ 0.18
CHCHD3-203ENST00000448878 NTMT1Q9BV86 223 aa16.19■□□□□ 0.18
CHCHD3-203ENST00000448878 REG4Q9BYZ8 158 aa16.19■□□□□ 0.18
CHCHD3-203ENST00000448878 FANCFQ9NPI8 374 aa16.19■□□□□ 0.18
CHCHD3-203ENST00000448878 NMRK1Q9NWW6 199 aa16.19■□□□□ 0.18
CHCHD3-203ENST00000448878 AQP8O94778 261 aa16.18■□□□□ 0.18
CHCHD3-203ENST00000448878 FCGR2AP12318 317 aa16.18■□□□□ 0.18
CHCHD3-203ENST00000448878 IDUAP35475 653 aa16.18■□□□□ 0.18
CHCHD3-203ENST00000448878 MAGEA4P43358 317 aa16.18■□□□□ 0.18
CHCHD3-203ENST00000448878 EIF1AXP47813 144 aaKnown RBP16.18■□□□□ 0.18
CHCHD3-203ENST00000448878 RFX3P48380 749 aa16.18■□□□□ 0.18
CHCHD3-203ENST00000448878 PLTPP55058 493 aa16.18■□□□□ 0.18
CHCHD3-203ENST00000448878 GNG11P61952 73 aa16.18■□□□□ 0.18
CHCHD3-203ENST00000448878 OCRLQ01968 901 aa16.18■□□□□ 0.18
CHCHD3-203ENST00000448878 GALNT1Q10472 559 aaPredicted RBP16.18■□□□□ 0.18
CHCHD3-203ENST00000448878 TRAF3Q13114 568 aa16.18■□□□□ 0.18
CHCHD3-203ENST00000448878 ZNF628Q5EBL2 1059 aa16.18■□□□□ 0.18
CHCHD3-203ENST00000448878 LGSNQ5TDP6 509 aa16.18■□□□□ 0.18
CHCHD3-203ENST00000448878 DUSP19Q8WTR2 217 aa16.18■□□□□ 0.18
CHCHD3-203ENST00000448878 IGFBPL1Q8WX77 278 aa16.18■□□□□ 0.18
CHCHD3-203ENST00000448878 MTBPQ96DY7 904 aa16.18■□□□□ 0.18
CHCHD3-203ENST00000448878 HBEGFQ99075 208 aa16.18■□□□□ 0.18
CHCHD3-203ENST00000448878 GIMAP4Q9NUV9 329 aa16.18■□□□□ 0.18
CHCHD3-203ENST00000448878 TAS2R9Q9NYW1 312 aa16.18■□□□□ 0.18
CHCHD3-203ENST00000448878 LINC01387J3KSC0 135 aa16.17■□□□□ 0.18
CHCHD3-203ENST00000448878 EIF1AYO14602 144 aaKnown RBP16.17■□□□□ 0.18
CHCHD3-203ENST00000448878 CLOCKO15516 846 aa16.17■□□□□ 0.18
CHCHD3-203ENST00000448878 TMCC2O75069 709 aa16.17■□□□□ 0.18
CHCHD3-203ENST00000448878 SMIM24O75264 130 aa16.17■□□□□ 0.18
CHCHD3-203ENST00000448878 TSPAN8P19075 237 aa16.17■□□□□ 0.18
CHCHD3-203ENST00000448878 CLK3P49761 638 aaKnown RBP16.17■□□□□ 0.18
CHCHD3-203ENST00000448878 ZNF155Q12901 538 aaPredicted RBP16.17■□□□□ 0.18
CHCHD3-203ENST00000448878 NAB1Q13506 487 aa16.17■□□□□ 0.18
CHCHD3-203ENST00000448878 GANABQ14697 944 aaKnown RBP16.17■□□□□ 0.18
CHCHD3-203ENST00000448878 TECRLQ5HYJ1 363 aa16.17■□□□□ 0.18
CHCHD3-203ENST00000448878 STAC2Q6ZMT1 411 aa16.17■□□□□ 0.18
CHCHD3-203ENST00000448878 RPS27LQ71UM5 84 aaKnown RBP16.17■□□□□ 0.18
CHCHD3-203ENST00000448878 FADS6Q8N9I5 356 aa16.17■□□□□ 0.18
CHCHD3-203ENST00000448878 OR6K3Q8NGY3 331 aa16.17■□□□□ 0.18
CHCHD3-203ENST00000448878 ZNF675Q8TD23 568 aa16.17■□□□□ 0.18
CHCHD3-203ENST00000448878 VSTM2LQ96N03 204 aa16.17■□□□□ 0.18
CHCHD3-203ENST00000448878 TACO1Q9BSH4 297 aaKnown RBP16.17■□□□□ 0.18
CHCHD3-203ENST00000448878 ACTR6Q9GZN1 396 aa16.17■□□□□ 0.18
CHCHD3-203ENST00000448878 ZBTB26Q9HCK0 441 aa16.17■□□□□ 0.18
CHCHD3-203ENST00000448878 PLSCR4Q9NRQ2 329 aa16.17■□□□□ 0.18
CHCHD3-203ENST00000448878 PCTPQ9UKL6 214 aa16.17■□□□□ 0.18
CHCHD3-203ENST00000448878 SNX6Q9UNH7 406 aa16.17■□□□□ 0.18
CHCHD3-203ENST00000448878 FAM187AA6NFU0 413 aa16.16■□□□□ 0.18
CHCHD3-203ENST00000448878 SHISA8B8ZZ34 492 aa16.16■□□□□ 0.18
CHCHD3-203ENST00000448878 TRA2BP62995 288 aaKnown RBP16.16■□□□□ 0.18
CHCHD3-203ENST00000448878 PSPHP78330 225 aa16.16■□□□□ 0.18
CHCHD3-203ENST00000448878 CTU2Q2VPK5 515 aaKnown RBP16.16■□□□□ 0.18
CHCHD3-203ENST00000448878 MARCH3Q86UD3 253 aa16.16■□□□□ 0.18
CHCHD3-203ENST00000448878 PLD6Q8N2A8 252 aaKnown RBP16.16■□□□□ 0.18
CHCHD3-203ENST00000448878 CEP112Q8N8E3 955 aa16.16■□□□□ 0.18
CHCHD3-203ENST00000448878 RAB3IL1Q8TBN0 382 aa16.16■□□□□ 0.18
CHCHD3-203ENST00000448878 GPR78Q96P69 363 aa16.16■□□□□ 0.18
CHCHD3-203ENST00000448878 NAPGQ99747 312 aaPredicted RBP16.16■□□□□ 0.18
CHCHD3-203ENST00000448878 FLRT3Q9NZU0 649 aa16.16■□□□□ 0.18
CHCHD3-203ENST00000448878 STOML1Q9UBI4 398 aa16.16■□□□□ 0.18
CHCHD3-203ENST00000448878 AP4B1Q9Y6B7 739 aa16.16■□□□□ 0.18
CHCHD3-203ENST00000448878 GNG14A0A1W2PPG7 69 aa16.15■□□□□ 0.18
CHCHD3-203ENST00000448878 TLX2O43763 284 aaPredicted RBP16.15■□□□□ 0.18
CHCHD3-203ENST00000448878 SOX30O94993 753 aa16.15■□□□□ 0.18
CHCHD3-203ENST00000448878 OPN1LWP04000 364 aa16.15■□□□□ 0.18
CHCHD3-203ENST00000448878 IL3P08700 152 aa16.15■□□□□ 0.18
CHCHD3-203ENST00000448878 RBP1P09455 135 aa16.15■□□□□ 0.18
CHCHD3-203ENST00000448878 ACVR1BP36896 505 aa16.15■□□□□ 0.18
CHCHD3-203ENST00000448878 CDKN1AP38936 164 aa16.15■□□□□ 0.18
CHCHD3-203ENST00000448878 SLC6A8P48029 635 aa16.15■□□□□ 0.18
CHCHD3-203ENST00000448878 SERPINB8P50452 374 aa16.15■□□□□ 0.18
CHCHD3-203ENST00000448878 FAM219BQ5XKK7 198 aa16.15■□□□□ 0.18
CHCHD3-203ENST00000448878 BEND4Q6ZU67 534 aa16.15■□□□□ 0.18
CHCHD3-203ENST00000448878 STK32CQ86UX6 486 aa16.15■□□□□ 0.18
CHCHD3-203ENST00000448878 HIPK1Q86Z02 1210 aa16.15■□□□□ 0.18
CHCHD3-203ENST00000448878 METTL25Q8N6Q8 603 aa16.15■□□□□ 0.18
CHCHD3-203ENST00000448878 ERP27Q96DN0 273 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms