RNA–Protein interactions for RNA: ENST00000420539.1

PTP4A1P1-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 1, humanhuman

BASIC

Gene PTP4A1P1, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P1-201ENST00000420539 VRK3Q8IV63 474 aa4.99□□□□□ -1.61
PTP4A1P1-201ENST00000420539 MMAAQ8IVH4 418 aaKnown RBP4.99□□□□□ -1.61
PTP4A1P1-201ENST00000420539 CMTM8Q8IZV2 173 aa4.99□□□□□ -1.61
PTP4A1P1-201ENST00000420539 LGI2Q8N0V4 545 aa4.99□□□□□ -1.61
PTP4A1P1-201ENST00000420539 CLEC4FQ8N1N0 589 aa4.99□□□□□ -1.61
PTP4A1P1-201ENST00000420539 LNX2Q8N448 690 aa4.99□□□□□ -1.61
PTP4A1P1-201ENST00000420539 SNX31Q8N9S9 440 aa4.99□□□□□ -1.61
PTP4A1P1-201ENST00000420539 POC1AQ8NBT0 407 aa4.99□□□□□ -1.61
PTP4A1P1-201ENST00000420539 NOA1Q8NC60 698 aaKnown RBP4.99□□□□□ -1.61
PTP4A1P1-201ENST00000420539 ADAD2Q8NCV1 583 aaKnown RBP4.99□□□□□ -1.61
PTP4A1P1-201ENST00000420539 ACVR1CQ8NER5 493 aa4.99□□□□□ -1.61
PTP4A1P1-201ENST00000420539 STXBP6Q8NFX7 210 aa4.99□□□□□ -1.61
PTP4A1P1-201ENST00000420539 OR5T1Q8NG75 326 aa4.99□□□□□ -1.61
PTP4A1P1-201ENST00000420539 CCDC107Q8WV48 283 aa4.99□□□□□ -1.61
PTP4A1P1-201ENST00000420539 NUDCD2Q8WVJ2 157 aa4.99□□□□□ -1.61
PTP4A1P1-201ENST00000420539 GTF2H4Q92759 462 aa4.99□□□□□ -1.61
PTP4A1P1-201ENST00000420539 CPB2Q96IY4 423 aa4.99□□□□□ -1.61
PTP4A1P1-201ENST00000420539 ZFYVE19Q96K21 471 aa4.99□□□□□ -1.61
PTP4A1P1-201ENST00000420539 NAT9Q9BTE0 207 aa4.99□□□□□ -1.61
PTP4A1P1-201ENST00000420539 MED10Q9BTT4 135 aa4.99□□□□□ -1.61
PTP4A1P1-201ENST00000420539 MCRIP2Q9BUT9 160 aaKnown RBP4.99□□□□□ -1.61
PTP4A1P1-201ENST00000420539 CHID1Q9BWS9 393 aa4.99□□□□□ -1.61
PTP4A1P1-201ENST00000420539 ILKAPQ9H0C8 392 aaPredicted RBP4.99□□□□□ -1.61
PTP4A1P1-201ENST00000420539 SDCBP2Q9H190 292 aa4.99□□□□□ -1.61
PTP4A1P1-201ENST00000420539 CLK4Q9HAZ1 481 aaKnown RBP4.99□□□□□ -1.61
PTP4A1P1-201ENST00000420539 CHST11Q9NPF2 352 aa4.99□□□□□ -1.61
PTP4A1P1-201ENST00000420539 SEMA4GQ9NTN9 838 aa4.99□□□□□ -1.61
PTP4A1P1-201ENST00000420539 MIOSQ9NXC5 875 aa4.99□□□□□ -1.61
PTP4A1P1-201ENST00000420539 NAGKQ9UJ70 344 aa4.99□□□□□ -1.61
PTP4A1P1-201ENST00000420539 PRPF19Q9UMS4 504 aaKnown RBP4.99□□□□□ -1.61
PTP4A1P1-201ENST00000420539 RNF6Q9Y252 685 aa4.99□□□□□ -1.61
PTP4A1P1-201ENST00000420539 POLDIP2Q9Y2S7 368 aa4.99□□□□□ -1.61
PTP4A1P1-201ENST00000420539 ZNF175Q9Y473 711 aa4.99□□□□□ -1.61
PTP4A1P1-201ENST00000420539 TIMM10BQ9Y5J6 103 aa4.99□□□□□ -1.61
PTP4A1P1-201ENST00000420539 CCDC7Q96M83 1385 aa4.99□□□□□ -1.61
PTP4A1P1-201ENST00000420539 ATP10AO60312 1499 aa4.99□□□□□ -1.61
PTP4A1P1-201ENST00000420539 PRAG1Q86YV5 1406 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 A0A1B0GW15 77 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 A0A1W2PP11 408 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 SH3PXD2BA1X283 911 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 MGAT4DA6NG13 374 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 OR5K4A6NMS3 321 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 ARHGEF33A8MVX0 844 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 H7C1Q1 480 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 LRCH4O75427 683 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 MLNP12872 115 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 PRF1P14222 555 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 HOXB8P17481 243 aaPredicted RBP4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 CD82P27701 267 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 GNA11P29992 359 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 CFHR2P36980 270 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 AVPR1AP37288 418 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 MNDAP41218 407 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 P2RY2P41231 377 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 TMPOP42166 694 aaKnown RBP4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 OR3A3P47888 321 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 CLDN18P56856 261 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 OR2B6P58173 313 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 EWSR1Q01844 656 aaKnown RBP eCLIP4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 GRB14Q14449 540 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 EFNB3Q15768 340 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 GLYR1Q49A26 553 aaPredicted RBP4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 GPR33Q49SQ1 333 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 ABHD17BQ5VST6 288 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 OR4A47Q6IF82 309 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 RFWD3Q6PCD5 774 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 KCTD18Q6PI47 426 aaPredicted RBP4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 CWC27Q6UX04 472 aaKnown RBP4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 C19orf35Q6ZS72 473 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 GPBP1Q86WP2 473 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 CACUL1Q86Y37 369 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 PLD3Q8IV08 490 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 CCDC50Q8IVM0 306 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 MFSD6LQ8IWD5 586 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 LSMEM2Q8N112 164 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 PELI3Q8N2H9 469 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 PRSS35Q8N3Z0 413 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 CLDN19Q8N6F1 224 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 TERB1Q8NA31 727 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 OR13J1Q8NGT2 312 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 RNF128Q8TEB7 428 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 DNAAF4Q8WXU2 420 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 MYLPFQ96A32 169 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 PPP1R14BQ96C90 147 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 OPTNQ96CV9 577 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 NAPGQ99747 312 aaPredicted RBP4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 CTRCQ99895 268 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 C7orf50Q9BRJ6 194 aaKnown RBP4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 CCM2Q9BSQ5 444 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 SYT11Q9BT88 431 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 ZNF747Q9BV97 191 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 TM2D2Q9BX73 214 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 OR2B2Q9GZK3 357 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 DRC3Q9H069 523 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 UGT1A10Q9HAW8 530 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 ACKR4Q9NPB9 350 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 CNGB3Q9NQW8 809 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 OR1A2Q9Y585 309 aa4.98□□□□□ -1.61
PTP4A1P1-201ENST00000420539 TTC21AQ8NDW8 1320 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms