RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 CDH12P55289 794 aa14.07□□□□□ -0.16
SCAF11-204ENST00000395454 NPRL3Q12980 569 aa14.07□□□□□ -0.16
SCAF11-204ENST00000395454 TOP3AQ13472 1001 aaPredicted RBP14.07□□□□□ -0.16
SCAF11-204ENST00000395454 RAPSNQ13702 412 aa14.07□□□□□ -0.16
SCAF11-204ENST00000395454 FAM53BQ14153 422 aa14.07□□□□□ -0.16
SCAF11-204ENST00000395454 EXOC3L2Q2M3D2 409 aa14.07□□□□□ -0.16
SCAF11-204ENST00000395454 CNPY1Q3B7I2 92 aa14.07□□□□□ -0.16
SCAF11-204ENST00000395454 COLEC12Q5KU26 742 aa14.07□□□□□ -0.16
SCAF11-204ENST00000395454 C1orf189Q5VU69 101 aa14.07□□□□□ -0.16
SCAF11-204ENST00000395454 AP1ARQ63HQ0 302 aa14.07□□□□□ -0.16
SCAF11-204ENST00000395454 RHBDD2Q6NTF9 364 aa14.07□□□□□ -0.16
SCAF11-204ENST00000395454 SZRD1Q7Z422 152 aa14.07□□□□□ -0.16
SCAF11-204ENST00000395454 ALDH16A1Q8IZ83 802 aa14.07□□□□□ -0.16
SCAF11-204ENST00000395454 OR9A4Q8NGU2 314 aa14.07□□□□□ -0.16
SCAF11-204ENST00000395454 FEVQ99581 238 aa14.07□□□□□ -0.16
SCAF11-204ENST00000395454 SCNM1Q9BWG6 230 aa14.07□□□□□ -0.16
SCAF11-204ENST00000395454 SLC38A1Q9H2H9 487 aa14.07□□□□□ -0.16
SCAF11-204ENST00000395454 C19orf53Q9UNZ5 99 aaPredicted RBP14.07□□□□□ -0.16
SCAF11-204ENST00000395454 FAM32AQ9Y421 112 aaKnown RBP14.07□□□□□ -0.16
SCAF11-204ENST00000395454 MAU2Q9Y6X3 613 aa14.07□□□□□ -0.16
SCAF11-204ENST00000395454 CFAP47Q6ZTR5 3102 aa14.07□□□□□ -0.16
SCAF11-204ENST00000395454 AHCTF1Q8WYP5 2266 aa14.07□□□□□ -0.16
SCAF11-204ENST00000395454 FER1L5A0AVI2 2057 aa14.07□□□□□ -0.16
SCAF11-204ENST00000395454 ZNF860A6NHJ4 632 aa14.07□□□□□ -0.16
SCAF11-204ENST00000395454 J3KTA2 159 aa14.07□□□□□ -0.16
SCAF11-204ENST00000395454 EPPINO95925 133 aa14.07□□□□□ -0.16
SCAF11-204ENST00000395454 RBMS1P29558 406 aaKnown RBP14.07□□□□□ -0.16
SCAF11-204ENST00000395454 GCGRP47871 477 aa14.07□□□□□ -0.16
SCAF11-204ENST00000395454 PRKAG1P54619 331 aa14.07□□□□□ -0.16
SCAF11-204ENST00000395454 EMP3P54852 163 aa14.07□□□□□ -0.16
SCAF11-204ENST00000395454 OLR1P78380 273 aa14.07□□□□□ -0.16
SCAF11-204ENST00000395454 YOD1Q5VVQ6 348 aaPredicted RBP14.07□□□□□ -0.16
SCAF11-204ENST00000395454 GALNT5Q7Z7M9 940 aa14.07□□□□□ -0.16
SCAF11-204ENST00000395454 SLC44A2Q8IWA5 706 aaPredicted RBP14.07□□□□□ -0.16
SCAF11-204ENST00000395454 SLC5A8Q8N695 610 aa14.07□□□□□ -0.16
SCAF11-204ENST00000395454 TMEM52Q8NDY8 209 aa14.07□□□□□ -0.16
SCAF11-204ENST00000395454 HOXB13Q92826 284 aaPredicted RBP14.07□□□□□ -0.16
SCAF11-204ENST00000395454 KAT2AQ92830 837 aa14.07□□□□□ -0.16
SCAF11-204ENST00000395454 CTHRC1Q96CG8 243 aa14.07□□□□□ -0.16
SCAF11-204ENST00000395454 MMABQ96EY8 250 aaPredicted RBP14.07□□□□□ -0.16
SCAF11-204ENST00000395454 SLC46A1Q96NT5 459 aa14.07□□□□□ -0.16
SCAF11-204ENST00000395454 RIBC2Q9H4K1 309 aa14.07□□□□□ -0.16
SCAF11-204ENST00000395454 FOXJ2Q9P0K8 574 aa14.07□□□□□ -0.16
SCAF11-204ENST00000395454 BLOC1S6Q9UL45 172 aa14.07□□□□□ -0.16
SCAF11-204ENST00000395454 POFUT2Q9Y2G5 429 aa14.07□□□□□ -0.16
SCAF11-204ENST00000395454 A0A1B0GX78 115 aa14.06□□□□□ -0.16
SCAF11-204ENST00000395454 BLACEA4D250 179 aa14.06□□□□□ -0.16
SCAF11-204ENST00000395454 SGK494L7N484 410 aa14.06□□□□□ -0.16
SCAF11-204ENST00000395454 FOXS1O43638 330 aa14.06□□□□□ -0.16
SCAF11-204ENST00000395454 FGF17O60258 216 aa14.06□□□□□ -0.16
SCAF11-204ENST00000395454 STK17BO94768 372 aa14.06□□□□□ -0.16
SCAF11-204ENST00000395454 GADD45GO95257 159 aa14.06□□□□□ -0.16
SCAF11-204ENST00000395454 LGI1O95970 557 aa14.06□□□□□ -0.16
SCAF11-204ENST00000395454 HBQ1P09105 142 aa14.06□□□□□ -0.16
SCAF11-204ENST00000395454 JUNBP17275 347 aaPredicted RBP14.06□□□□□ -0.16
SCAF11-204ENST00000395454 MAP3K8P41279 467 aa14.06□□□□□ -0.16
SCAF11-204ENST00000395454 SKP1P63208 163 aa14.06□□□□□ -0.16
SCAF11-204ENST00000395454 MGAT2Q10469 447 aa14.06□□□□□ -0.16
SCAF11-204ENST00000395454 CYP27C1Q4G0S4 372 aa14.06□□□□□ -0.16
SCAF11-204ENST00000395454 COMTD1Q86VU5 262 aa14.06□□□□□ -0.16
SCAF11-204ENST00000395454 OR5T3Q8NGG3 340 aa14.06□□□□□ -0.16
SCAF11-204ENST00000395454 OR4D11Q8NGI4 311 aa14.06□□□□□ -0.16
SCAF11-204ENST00000395454 ADAMTS18Q8TE60 1221 aa14.06□□□□□ -0.16
SCAF11-204ENST00000395454 MAGED4Q96JG8 741 aa14.06□□□□□ -0.16
SCAF11-204ENST00000395454 APOL4Q9BPW4 351 aa14.06□□□□□ -0.16
SCAF11-204ENST00000395454 PINK1Q9BXM7 581 aa14.06□□□□□ -0.16
SCAF11-204ENST00000395454 PAPOLBQ9NRJ5 636 aaKnown RBP14.06□□□□□ -0.16
SCAF11-204ENST00000395454 PCDHGA3Q9Y5H0 932 aa14.06□□□□□ -0.16
SCAF11-204ENST00000395454 KCNE3Q9Y6H6 103 aa14.06□□□□□ -0.16
SCAF11-204ENST00000395454 CEPT1Q9Y6K0 416 aa14.06□□□□□ -0.16
SCAF11-204ENST00000395454 DSCR3O14972 297 aa14.05□□□□□ -0.16
SCAF11-204ENST00000395454 NSA2O95478 260 aaKnown RBP14.05□□□□□ -0.16
SCAF11-204ENST00000395454 IL7RP16871 459 aa14.05□□□□□ -0.16
SCAF11-204ENST00000395454 EPHA2P29317 976 aa14.05□□□□□ -0.16
SCAF11-204ENST00000395454 OR1D4P47884 311 aa14.05□□□□□ -0.16
SCAF11-204ENST00000395454 AVPR1BP47901 424 aa14.05□□□□□ -0.16
SCAF11-204ENST00000395454 NUP107P57740 925 aa14.05□□□□□ -0.16
SCAF11-204ENST00000395454 SHC2P98077 582 aa14.05□□□□□ -0.16
SCAF11-204ENST00000395454 CDK5R2Q13319 367 aa14.05□□□□□ -0.16
SCAF11-204ENST00000395454 CAMK2BQ13554 666 aa14.05□□□□□ -0.16
SCAF11-204ENST00000395454 MEP1AQ16819 746 aa14.05□□□□□ -0.16
SCAF11-204ENST00000395454 ZCCHC12Q6PEW1 402 aa14.05□□□□□ -0.16
SCAF11-204ENST00000395454 CCDC71Q8IV32 467 aaPredicted RBP14.05□□□□□ -0.16
SCAF11-204ENST00000395454 PHF10Q8WUB8 498 aaKnown RBP14.05□□□□□ -0.16
SCAF11-204ENST00000395454 ANKRD9Q96BM1 317 aaPredicted RBP14.05□□□□□ -0.16
SCAF11-204ENST00000395454 MVB12AQ96EY5 273 aa14.05□□□□□ -0.16
SCAF11-204ENST00000395454 NRSN2Q9GZP1 204 aa14.05□□□□□ -0.16
SCAF11-204ENST00000395454 NMNAT1Q9HAN9 279 aaPredicted RBP14.05□□□□□ -0.16
SCAF11-204ENST00000395454 RLIMQ9NVW2 624 aa14.05□□□□□ -0.16
SCAF11-204ENST00000395454 ENOPH1Q9UHY7 261 aa14.05□□□□□ -0.16
SCAF11-204ENST00000395454 SDK2Q58EX2 2172 aa14.05□□□□□ -0.16
SCAF11-204ENST00000395454 SCN2AQ99250 2005 aa14.05□□□□□ -0.16
SCAF11-204ENST00000395454 TEX51A0A1B0GUA7 166 aa14.05□□□□□ -0.16
SCAF11-204ENST00000395454 MEN1O00255 615 aa14.05□□□□□ -0.16
SCAF11-204ENST00000395454 SLC1A7O00341 560 aa14.05□□□□□ -0.16
SCAF11-204ENST00000395454 PCDH17O14917 1159 aa14.05□□□□□ -0.16
SCAF11-204ENST00000395454 RDH16O75452 317 aa14.05□□□□□ -0.16
SCAF11-204ENST00000395454 OXSR1O95747 527 aaPredicted RBP14.05□□□□□ -0.16
SCAF11-204ENST00000395454 TTKP33981 857 aa14.05□□□□□ -0.16
SCAF11-204ENST00000395454 YAP1P46937 504 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms