RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 ADH7P40394 386 aa16.14■□□□□ 0.18
TRAPPC11-201ENST00000334690 RNF144AP50876 292 aaPredicted RBP16.14■□□□□ 0.18
TRAPPC11-201ENST00000334690 ART1P52961 327 aa16.14■□□□□ 0.18
TRAPPC11-201ENST00000334690 HNRNPKP61978 463 aaKnown RBP eCLIP16.14■□□□□ 0.18
TRAPPC11-201ENST00000334690 PRDX1Q06830 199 aaKnown RBP16.14■□□□□ 0.18
TRAPPC11-201ENST00000334690 FAM217AQ8IXS0 508 aa16.14■□□□□ 0.18
TRAPPC11-201ENST00000334690 VWA5B2Q8N398 1253 aa16.14■□□□□ 0.18
TRAPPC11-201ENST00000334690 CASTOR1Q8WTX7 329 aa16.14■□□□□ 0.18
TRAPPC11-201ENST00000334690 C17orf50Q8WW18 174 aa16.14■□□□□ 0.18
TRAPPC11-201ENST00000334690 CD300AQ9UGN4 299 aa16.14■□□□□ 0.18
TRAPPC11-201ENST00000334690 RBM12BQ8IXT5 1001 aaKnown RBP16.14■□□□□ 0.17
TRAPPC11-201ENST00000334690 OR8S1Q8NH09 359 aa16.14■□□□□ 0.17
TRAPPC11-201ENST00000334690 TMEM239Q8WW34 195 aa16.14■□□□□ 0.17
TRAPPC11-201ENST00000334690 HYLS1Q96M11 299 aa16.14■□□□□ 0.17
TRAPPC11-201ENST00000334690 URM1Q9BTM9 101 aaKnown RBP16.14■□□□□ 0.17
TRAPPC11-201ENST00000334690 ALG8Q9BVK2 526 aa16.14■□□□□ 0.17
TRAPPC11-201ENST00000334690 ATG5Q9H1Y0 275 aa16.14■□□□□ 0.17
TRAPPC11-201ENST00000334690 MCCC2Q9HCC0 563 aa16.14■□□□□ 0.17
TRAPPC11-201ENST00000334690 ZNF334Q9HCZ1 680 aaPredicted RBP16.14■□□□□ 0.17
TRAPPC11-201ENST00000334690 OLAHQ9NV23 265 aa16.14■□□□□ 0.17
TRAPPC11-201ENST00000334690 CLDN24A6NM45 220 aa16.14■□□□□ 0.17
TRAPPC11-201ENST00000334690 C21orf33P30042 268 aaPredicted RBP16.14■□□□□ 0.17
TRAPPC11-201ENST00000334690 DCDC5Q6ZRR9 648 aa16.14■□□□□ 0.17
TRAPPC11-201ENST00000334690 OR5D16Q8NGK9 328 aa16.14■□□□□ 0.17
TRAPPC11-201ENST00000334690 OR2A12Q8NGT7 310 aa16.14■□□□□ 0.17
TRAPPC11-201ENST00000334690 WDR20Q8TBZ3 569 aa16.14■□□□□ 0.17
TRAPPC11-201ENST00000334690 SFXN5Q8TD22 340 aa16.14■□□□□ 0.17
TRAPPC11-201ENST00000334690 TANKQ92844 425 aa16.14■□□□□ 0.17
TRAPPC11-201ENST00000334690 ZSCAN5BA6NJL1 495 aa16.14■□□□□ 0.17
TRAPPC11-201ENST00000334690 RP2O75695 350 aa16.14■□□□□ 0.17
TRAPPC11-201ENST00000334690 SCGNO76038 276 aa16.14■□□□□ 0.17
TRAPPC11-201ENST00000334690 FARS2O95363 451 aaKnown RBP16.14■□□□□ 0.17
TRAPPC11-201ENST00000334690 ARNTP27540 789 aa16.14■□□□□ 0.17
TRAPPC11-201ENST00000334690 CEBPGP53567 150 aa16.14■□□□□ 0.17
TRAPPC11-201ENST00000334690 CLRN1P58418 232 aa16.14■□□□□ 0.17
TRAPPC11-201ENST00000334690 PRPS1P60891 318 aa16.14■□□□□ 0.17
TRAPPC11-201ENST00000334690 ZNF542PQ5EBM4 170 aa16.14■□□□□ 0.17
TRAPPC11-201ENST00000334690 NHSL2Q5HYW2 709 aa16.14■□□□□ 0.17
TRAPPC11-201ENST00000334690 RAB12Q6IQ22 244 aa16.14■□□□□ 0.17
TRAPPC11-201ENST00000334690 FBXO46Q6PJ61 603 aaPredicted RBP16.14■□□□□ 0.17
TRAPPC11-201ENST00000334690 B3GNT8Q7Z7M8 397 aa16.14■□□□□ 0.17
TRAPPC11-201ENST00000334690 OR5L2Q8NGL0 311 aa16.14■□□□□ 0.17
TRAPPC11-201ENST00000334690 OR2T11Q8NH01 316 aa16.14■□□□□ 0.17
TRAPPC11-201ENST00000334690 ZFP90Q8TF47 636 aa16.14■□□□□ 0.17
TRAPPC11-201ENST00000334690 GPR78Q96P69 363 aa16.14■□□□□ 0.17
TRAPPC11-201ENST00000334690 TIMM29Q9BSF4 260 aa16.14■□□□□ 0.17
TRAPPC11-201ENST00000334690 SORBS1Q9BX66 1292 aaKnown RBP16.14■□□□□ 0.17
TRAPPC11-201ENST00000334690 DPH1Q9BZG8 443 aa16.14■□□□□ 0.17
TRAPPC11-201ENST00000334690 ZBTB20Q9HC78 741 aaPredicted RBP16.14■□□□□ 0.17
TRAPPC11-201ENST00000334690 HCSTQ9UBK5 93 aa16.14■□□□□ 0.17
TRAPPC11-201ENST00000334690 GIPRP48546 466 aa16.13■□□□□ 0.17
TRAPPC11-201ENST00000334690 FXYD6P3P58550 94 aa16.13■□□□□ 0.17
TRAPPC11-201ENST00000334690 GXYLT1Q4G148 440 aa16.13■□□□□ 0.17
TRAPPC11-201ENST00000334690 TTLL10Q6ZVT0 673 aa16.13■□□□□ 0.17
TRAPPC11-201ENST00000334690 DEFB119Q8N690 84 aa16.13■□□□□ 0.17
TRAPPC11-201ENST00000334690 GMEB2Q9UKD1 530 aa16.13■□□□□ 0.17
TRAPPC11-201ENST00000334690 ADAM29Q9UKF5 820 aa16.13■□□□□ 0.17
TRAPPC11-201ENST00000334690 LYRM1O43325 122 aa16.13■□□□□ 0.17
TRAPPC11-201ENST00000334690 THEGLP0DJG4 465 aa16.13■□□□□ 0.17
TRAPPC11-201ENST00000334690 CTXN1P60606 82 aa16.13■□□□□ 0.17
TRAPPC11-201ENST00000334690 KCTD9Q7L273 389 aa16.13■□□□□ 0.17
TRAPPC11-201ENST00000334690 FKBP14Q9NWM8 211 aa16.13■□□□□ 0.17
TRAPPC11-201ENST00000334690 SLC7A7Q9UM01 511 aa16.13■□□□□ 0.17
TRAPPC11-201ENST00000334690 CSNK1G3Q9Y6M4 447 aa16.13■□□□□ 0.17
TRAPPC11-201ENST00000334690 COL18A1P39060 1754 aa16.13■□□□□ 0.17
TRAPPC11-201ENST00000334690 TEX13CA0A0J9YWL9 993 aa16.13■□□□□ 0.17
TRAPPC11-201ENST00000334690 A0A1W2PPL8 197 aa16.13■□□□□ 0.17
TRAPPC11-201ENST00000334690 KRBA1A5PL33 1030 aa16.13■□□□□ 0.17
TRAPPC11-201ENST00000334690 ARSAP15289 507 aa16.13■□□□□ 0.17
TRAPPC11-201ENST00000334690 CEBPBP17676 345 aa16.13■□□□□ 0.17
TRAPPC11-201ENST00000334690 PLXDC1Q8IUK5 500 aa16.13■□□□□ 0.17
TRAPPC11-201ENST00000334690 TIGD4Q8IY51 512 aa16.13■□□□□ 0.17
TRAPPC11-201ENST00000334690 ZNF619Q8N2I2 560 aa16.13■□□□□ 0.17
TRAPPC11-201ENST00000334690 TCEAL4Q96EI5 215 aa16.13■□□□□ 0.17
TRAPPC11-201ENST00000334690 RBMXP38159 391 aaKnown RBP16.12■□□□□ 0.17
TRAPPC11-201ENST00000334690 MFSD13AQ14CX5 517 aa16.12■□□□□ 0.17
TRAPPC11-201ENST00000334690 OR52E1Q8NGJ3 308 aa16.12■□□□□ 0.17
TRAPPC11-201ENST00000334690 OR6Q1Q8NGQ2 317 aa16.12■□□□□ 0.17
TRAPPC11-201ENST00000334690 CDCA3Q99618 268 aaPredicted RBP16.12■□□□□ 0.17
TRAPPC11-201ENST00000334690 SAP130Q9H0E3 1048 aa16.12■□□□□ 0.17
TRAPPC11-201ENST00000334690 MEGF11A6BM72 1044 aa16.12■□□□□ 0.17
TRAPPC11-201ENST00000334690 FRS3O43559 492 aa16.12■□□□□ 0.17
TRAPPC11-201ENST00000334690 IMPA1P29218 277 aa16.12■□□□□ 0.17
TRAPPC11-201ENST00000334690 PLEKHN1Q494U1 663 aaPredicted RBP16.12■□□□□ 0.17
TRAPPC11-201ENST00000334690 FOXRED2Q8IWF2 684 aa16.12■□□□□ 0.17
TRAPPC11-201ENST00000334690 ZNF471Q9BX82 626 aaPredicted RBP16.12■□□□□ 0.17
TRAPPC11-201ENST00000334690 THSD1Q9NS62 852 aa16.12■□□□□ 0.17
TRAPPC11-201ENST00000334690 PADI2Q9Y2J8 665 aa16.12■□□□□ 0.17
TRAPPC11-201ENST00000334690 AP1G1O43747 822 aa16.12■□□□□ 0.17
TRAPPC11-201ENST00000334690 TRAPPC6AO75865 159 aa16.12■□□□□ 0.17
TRAPPC11-201ENST00000334690 F11P03951 625 aa16.12■□□□□ 0.17
TRAPPC11-201ENST00000334690 PTGS2P35354 604 aa16.12■□□□□ 0.17
TRAPPC11-201ENST00000334690 SOX3P41225 446 aa16.12■□□□□ 0.17
TRAPPC11-201ENST00000334690 GDI2P50395 445 aaKnown RBP16.12■□□□□ 0.17
TRAPPC11-201ENST00000334690 S100A10P60903 97 aa16.12■□□□□ 0.17
TRAPPC11-201ENST00000334690 LEG1Q6P5S2 330 aa16.12■□□□□ 0.17
TRAPPC11-201ENST00000334690 FAM83HQ6ZRV2 1179 aaPredicted RBP16.12■□□□□ 0.17
TRAPPC11-201ENST00000334690 UBQLNLQ8IYU4 475 aa16.12■□□□□ 0.17
TRAPPC11-201ENST00000334690 HPF1Q9NWY4 346 aa16.12■□□□□ 0.17
TRAPPC11-201ENST00000334690 ACTR10Q9NZ32 417 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms