RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 ZNHIT3Q15649 155 aaPredicted RBP20.64■□□□□ 0.89
CCDC9-204ENST00000599398 LRIG3Q6UXM1 1119 aa20.64■□□□□ 0.89
CCDC9-204ENST00000599398 SZRD1Q7Z422 152 aa20.64■□□□□ 0.89
CCDC9-204ENST00000599398 R3HCC1LQ7Z5L2 792 aaKnown RBP20.64■□□□□ 0.89
CCDC9-204ENST00000599398 WDR53Q7Z5U6 358 aaPredicted RBP20.64■□□□□ 0.89
CCDC9-204ENST00000599398 FNDC5Q8NAU1 212 aa20.64■□□□□ 0.89
CCDC9-204ENST00000599398 OR10Q1Q8NGQ4 319 aa20.64■□□□□ 0.89
CCDC9-204ENST00000599398 ASB5Q8WWX0 329 aa20.64■□□□□ 0.89
CCDC9-204ENST00000599398 TUBGCP3Q96CW5 907 aa20.64■□□□□ 0.89
CCDC9-204ENST00000599398 ZBED6CLQ96FA7 236 aaPredicted RBP20.64■□□□□ 0.89
CCDC9-204ENST00000599398 EQTNQ9NQ60 294 aa20.64■□□□□ 0.89
CCDC9-204ENST00000599398 RNF6Q9Y252 685 aa20.64■□□□□ 0.89
CCDC9-204ENST00000599398 ACTL7BQ9Y614 415 aa20.64■□□□□ 0.89
CCDC9-204ENST00000599398 ZWINTO95229 277 aa20.63■□□□□ 0.89
CCDC9-204ENST00000599398 SNRPB2P08579 225 aaKnown RBP20.63■□□□□ 0.89
CCDC9-204ENST00000599398 DDX5P17844 614 aaKnown RBP20.63■□□□□ 0.89
CCDC9-204ENST00000599398 PNLIPRP2P54317 469 aa20.63■□□□□ 0.89
CCDC9-204ENST00000599398 ABCE1P61221 599 aaKnown RBP20.63■□□□□ 0.89
CCDC9-204ENST00000599398 MRPS22P82650 360 aaKnown RBP20.63■□□□□ 0.89
CCDC9-204ENST00000599398 PDE7AQ13946 482 aa20.63■□□□□ 0.89
CCDC9-204ENST00000599398 TNFAIP8L3Q5GJ75 292 aa20.63■□□□□ 0.89
CCDC9-204ENST00000599398 C6orf136Q5SQH8 315 aa20.63■□□□□ 0.89
CCDC9-204ENST00000599398 C1orf185Q5T7R7 199 aa20.63■□□□□ 0.89
CCDC9-204ENST00000599398 CES4AQ5XG92 561 aa20.63■□□□□ 0.89
CCDC9-204ENST00000599398 NTNG2Q96CW9 530 aa20.63■□□□□ 0.89
CCDC9-204ENST00000599398 PGM2Q96G03 612 aa20.63■□□□□ 0.89
CCDC9-204ENST00000599398 PAIP2Q9BPZ3 127 aaKnown RBP20.63■□□□□ 0.89
CCDC9-204ENST00000599398 ZNF395Q9H8N7 513 aaPredicted RBP20.63■□□□□ 0.89
CCDC9-204ENST00000599398 Q9N2J8 555 aa20.63■□□□□ 0.89
CCDC9-204ENST00000599398 SERHLQ9NQF3 203 aa20.63■□□□□ 0.89
CCDC9-204ENST00000599398 SLC6A5Q9Y345 797 aa20.63■□□□□ 0.89
CCDC9-204ENST00000599398 FAM215AQ9Y5M1 114 aa20.63■□□□□ 0.89
CCDC9-204ENST00000599398 MED12Q93074 2177 aa20.62■□□□□ 0.89
CCDC9-204ENST00000599398 PSMG1O95456 288 aa20.62■□□□□ 0.89
CCDC9-204ENST00000599398 COX6B1P14854 86 aa20.62■□□□□ 0.89
CCDC9-204ENST00000599398 GABRA1P14867 456 aa20.62■□□□□ 0.89
CCDC9-204ENST00000599398 EFNA1P20827 205 aaPredicted RBP20.62■□□□□ 0.89
CCDC9-204ENST00000599398 CHRNB4P30926 498 aa20.62■□□□□ 0.89
CCDC9-204ENST00000599398 PRKAG1P54619 331 aa20.62■□□□□ 0.89
CCDC9-204ENST00000599398 PDCD2Q16342 344 aaPredicted RBP20.62■□□□□ 0.89
CCDC9-204ENST00000599398 DECR1Q16698 335 aa20.62■□□□□ 0.89
CCDC9-204ENST00000599398 CYP27C1Q4G0S4 372 aa20.62■□□□□ 0.89
CCDC9-204ENST00000599398 EIPR1Q53HC9 387 aa20.62■□□□□ 0.89
CCDC9-204ENST00000599398 WIPI1Q5MNZ9 446 aaPredicted RBP20.62■□□□□ 0.89
CCDC9-204ENST00000599398 IL23RQ5VWK5 629 aa20.62■□□□□ 0.89
CCDC9-204ENST00000599398 RTL6Q6ICC9 239 aa20.62■□□□□ 0.89
CCDC9-204ENST00000599398 CCDC71Q8IV32 467 aaPredicted RBP20.62■□□□□ 0.89
CCDC9-204ENST00000599398 MTERF3Q96E29 417 aa20.62■□□□□ 0.89
CCDC9-204ENST00000599398 TTYH2Q9BSA4 534 aa20.62■□□□□ 0.89
CCDC9-204ENST00000599398 RUBCNLQ9H714 662 aa20.62■□□□□ 0.89
CCDC9-204ENST00000599398 CBLCQ9ULV8 474 aa20.62■□□□□ 0.89
CCDC9-204ENST00000599398 WIF1Q9Y5W5 379 aa20.62■□□□□ 0.89
CCDC9-204ENST00000599398 TEX15Q9BXT5 2789 aa20.62■□□□□ 0.89
CCDC9-204ENST00000599398 ARHGAP21Q5T5U3 1957 aa20.61■□□□□ 0.89
CCDC9-204ENST00000599398 FAM90A27PA6NNH2 459 aa20.61■□□□□ 0.89
CCDC9-204ENST00000599398 C19orf84I3L1E1 186 aa20.61■□□□□ 0.89
CCDC9-204ENST00000599398 SCAMP2O15127 329 aaKnown RBP20.61■□□□□ 0.89
CCDC9-204ENST00000599398 DHRS4L1P0CG22 281 aa20.61■□□□□ 0.89
CCDC9-204ENST00000599398 PRPS2P11908 318 aa20.61■□□□□ 0.89
CCDC9-204ENST00000599398 CYP4B1P13584 511 aa20.61■□□□□ 0.89
CCDC9-204ENST00000599398 BGNP21810 368 aa20.61■□□□□ 0.89
CCDC9-204ENST00000599398 RPL3P39023 403 aaKnown RBP20.61■□□□□ 0.89
CCDC9-204ENST00000599398 RFX3P48380 749 aa20.61■□□□□ 0.89
CCDC9-204ENST00000599398 GAB1Q13480 694 aa20.61■□□□□ 0.89
CCDC9-204ENST00000599398 MPP2Q14168 576 aa20.61■□□□□ 0.89
CCDC9-204ENST00000599398 PTGR1Q14914 329 aa20.61■□□□□ 0.89
CCDC9-204ENST00000599398 YRDCQ86U90 279 aaKnown RBP20.61■□□□□ 0.89
CCDC9-204ENST00000599398 ZNF781Q8N8C0 355 aa20.61■□□□□ 0.89
CCDC9-204ENST00000599398 ANKRD42Q8N9B4 389 aa20.61■□□□□ 0.89
CCDC9-204ENST00000599398 WDSUB1Q8N9V3 476 aa20.61■□□□□ 0.89
CCDC9-204ENST00000599398 FAM83FQ8NEG4 500 aaPredicted RBP20.61■□□□□ 0.89
CCDC9-204ENST00000599398 OR7A2PQ8NGA2 310 aa20.61■□□□□ 0.89
CCDC9-204ENST00000599398 PPP1R36Q96LQ0 422 aa20.61■□□□□ 0.89
CCDC9-204ENST00000599398 ACSS1Q9NUB1 689 aaPredicted RBP20.61■□□□□ 0.89
CCDC9-204ENST00000599398 MRTO4Q9UKD2 239 aaKnown RBP20.61■□□□□ 0.89
CCDC9-204ENST00000599398 CBR3O75828 277 aa20.6■□□□□ 0.89
CCDC9-204ENST00000599398 HOXD4P09016 255 aaPredicted RBP20.6■□□□□ 0.89
CCDC9-204ENST00000599398 IFI6P09912 130 aa20.6■□□□□ 0.89
CCDC9-204ENST00000599398 GLI4P10075 376 aa20.6■□□□□ 0.89
CCDC9-204ENST00000599398 GABRA3P34903 492 aa20.6■□□□□ 0.89
CCDC9-204ENST00000599398 GCKP35557 465 aa20.6■□□□□ 0.89
CCDC9-204ENST00000599398 FRKP42685 505 aaPredicted RBP20.6■□□□□ 0.89
CCDC9-204ENST00000599398 SLC1A6P48664 564 aa20.6■□□□□ 0.89
CCDC9-204ENST00000599398 CRYZQ08257 329 aaKnown RBP20.6■□□□□ 0.89
CCDC9-204ENST00000599398 HHATQ5VTY9 493 aa20.6■□□□□ 0.89
CCDC9-204ENST00000599398 OR5M10Q6IEU7 315 aa20.6■□□□□ 0.89
CCDC9-204ENST00000599398 PLCZ1Q86YW0 608 aa20.6■□□□□ 0.89
CCDC9-204ENST00000599398 ULK2Q8IYT8 1036 aa20.6■□□□□ 0.89
CCDC9-204ENST00000599398 NUP43Q8NFH3 380 aa20.6■□□□□ 0.89
CCDC9-204ENST00000599398 CEP70Q8NHQ1 597 aa20.6■□□□□ 0.89
CCDC9-204ENST00000599398 TIMP4Q99727 224 aa20.6■□□□□ 0.89
CCDC9-204ENST00000599398 LMF2Q9BU23 707 aaKnown RBP20.6■□□□□ 0.89
CCDC9-204ENST00000599398 C3orf14Q9HBI5 128 aa20.6■□□□□ 0.89
CCDC9-204ENST00000599398 ATP6V1HQ9UI12 483 aa20.6■□□□□ 0.89
CCDC9-204ENST00000599398 CAMK2AQ9UQM7 478 aa20.6■□□□□ 0.89
CCDC9-204ENST00000599398 EIF3LQ9Y262 564 aaKnown RBP20.6■□□□□ 0.89
CCDC9-204ENST00000599398 RAP2CQ9Y3L5 183 aa20.6■□□□□ 0.89
CCDC9-204ENST00000599398 PCDHGB3Q9Y5G1 929 aa20.6■□□□□ 0.89
CCDC9-204ENST00000599398 INTS1Q8N201 2190 aaKnown RBP20.59■□□□□ 0.89
CCDC9-204ENST00000599398 ADGRG4Q8IZF6 3080 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms