RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 SLC9A5Q14940 896 aa16.05■□□□□ 0.16
SHKBP1-205ENST00000594973 ZIC1Q15915 447 aa16.05■□□□□ 0.16
SHKBP1-205ENST00000594973 TMEM35AQ53FP2 167 aa16.05■□□□□ 0.16
SHKBP1-205ENST00000594973 IFI44LQ53G44 452 aa16.05■□□□□ 0.16
SHKBP1-205ENST00000594973 LAMTOR1Q6IAA8 161 aa16.05■□□□□ 0.16
SHKBP1-205ENST00000594973 Q6ZSR6 202 aa16.05■□□□□ 0.16
SHKBP1-205ENST00000594973 C6orf120Q7Z4R8 191 aa16.05■□□□□ 0.16
SHKBP1-205ENST00000594973 NEURL3Q96EH8 262 aa16.05■□□□□ 0.16
SHKBP1-205ENST00000594973 RNF31Q96EP0 1072 aa16.05■□□□□ 0.16
SHKBP1-205ENST00000594973 GABARAPL3Q9BY60 117 aa16.05■□□□□ 0.16
SHKBP1-205ENST00000594973 SIRT3Q9NTG7 399 aaPredicted RBP16.05■□□□□ 0.16
SHKBP1-205ENST00000594973 OR6C2Q9NZP2 312 aa16.05■□□□□ 0.16
SHKBP1-205ENST00000594973 ANGPT4Q9Y264 503 aa16.05■□□□□ 0.16
SHKBP1-205ENST00000594973 PCDHGA6Q9Y5G7 932 aa16.05■□□□□ 0.16
SHKBP1-205ENST00000594973 AP1M2Q9Y6Q5 423 aa16.05■□□□□ 0.16
SHKBP1-205ENST00000594973 GON4LQ3T8J9 2241 aa16.04■□□□□ 0.16
SHKBP1-205ENST00000594973 SHISA7A6NL88 538 aa16.04■□□□□ 0.16
SHKBP1-205ENST00000594973 BCHEP06276 602 aa16.04■□□□□ 0.16
SHKBP1-205ENST00000594973 ALPPL2P10696 532 aa16.04■□□□□ 0.16
SHKBP1-205ENST00000594973 HIST1H1TP22492 207 aaPredicted RBP16.04■□□□□ 0.16
SHKBP1-205ENST00000594973 AKT2P31751 481 aa16.04■□□□□ 0.16
SHKBP1-205ENST00000594973 GPC1P35052 558 aa16.04■□□□□ 0.16
SHKBP1-205ENST00000594973 MFSD13AQ14CX5 517 aa16.04■□□□□ 0.16
SHKBP1-205ENST00000594973 ALG11Q2TAA5 492 aa16.04■□□□□ 0.16
SHKBP1-205ENST00000594973 ZBTB37Q5TC79 503 aa16.04■□□□□ 0.16
SHKBP1-205ENST00000594973 SAXO2Q658L1 398 aa16.04■□□□□ 0.16
SHKBP1-205ENST00000594973 ABHD17CQ6PCB6 329 aa16.04■□□□□ 0.16
SHKBP1-205ENST00000594973 DGLUCYQ7Z3D6 616 aa16.04■□□□□ 0.16
SHKBP1-205ENST00000594973 TBC1D19Q8N5T2 526 aa16.04■□□□□ 0.16
SHKBP1-205ENST00000594973 ACOT4Q8N9L9 421 aa16.04■□□□□ 0.16
SHKBP1-205ENST00000594973 OR4M2Q8NGB6 313 aa16.04■□□□□ 0.16
SHKBP1-205ENST00000594973 KCNC2Q96PR1 638 aa16.04■□□□□ 0.16
SHKBP1-205ENST00000594973 C6orf106Q9H6K1 298 aaPredicted RBP16.04■□□□□ 0.16
SHKBP1-205ENST00000594973 ATG4BQ9Y4P1 393 aa16.04■□□□□ 0.16
SHKBP1-205ENST00000594973 PRAMEF25A6NGN4 478 aa16.03■□□□□ 0.16
SHKBP1-205ENST00000594973 C5orf58C9J3I9 102 aa16.03■□□□□ 0.16
SHKBP1-205ENST00000594973 PGRMC2O15173 223 aa16.03■□□□□ 0.16
SHKBP1-205ENST00000594973 AKR7A2O43488 359 aa16.03■□□□□ 0.16
SHKBP1-205ENST00000594973 TBX19O60806 448 aa16.03■□□□□ 0.16
SHKBP1-205ENST00000594973 C9P02748 559 aa16.03■□□□□ 0.16
SHKBP1-205ENST00000594973 CERS1P27544 350 aa16.03■□□□□ 0.16
SHKBP1-205ENST00000594973 PXNP49023 591 aaPredicted RBP16.03■□□□□ 0.16
SHKBP1-205ENST00000594973 ANGPT1Q15389 498 aa16.03■□□□□ 0.16
SHKBP1-205ENST00000594973 ZNF750Q32MQ0 723 aa16.03■□□□□ 0.16
SHKBP1-205ENST00000594973 ZNF542PQ5EBM4 170 aa16.03■□□□□ 0.16
SHKBP1-205ENST00000594973 PRRT3Q5FWE3 981 aa16.03■□□□□ 0.16
SHKBP1-205ENST00000594973 SLC38A5Q8WUX1 472 aa16.03■□□□□ 0.16
SHKBP1-205ENST00000594973 PRDM7Q9NQW5 492 aa16.03■□□□□ 0.16
SHKBP1-205ENST00000594973 J3KTA2 159 aa16.03■□□□□ 0.16
SHKBP1-205ENST00000594973 PRAMEF10O60809 474 aa16.03■□□□□ 0.16
SHKBP1-205ENST00000594973 CYP7B1O75881 506 aa16.03■□□□□ 0.16
SHKBP1-205ENST00000594973 ALAS2P22557 587 aa16.03■□□□□ 0.16
SHKBP1-205ENST00000594973 NDUFS1P28331 727 aa16.03■□□□□ 0.16
SHKBP1-205ENST00000594973 AHRP35869 848 aa16.03■□□□□ 0.16
SHKBP1-205ENST00000594973 CCT3P49368 545 aaKnown RBP16.03■□□□□ 0.16
SHKBP1-205ENST00000594973 NCBP2P52298 156 aaKnown RBP eCLIP16.03■□□□□ 0.16
SHKBP1-205ENST00000594973 PCBP3P57721 371 aaKnown RBP16.03■□□□□ 0.16
SHKBP1-205ENST00000594973 RAB25P57735 213 aa16.03■□□□□ 0.16
SHKBP1-205ENST00000594973 RIPPLY1Q0D2K3 151 aa16.03■□□□□ 0.16
SHKBP1-205ENST00000594973 CRB2Q5IJ48 1285 aa16.03■□□□□ 0.16
SHKBP1-205ENST00000594973 REEP3Q6NUK4 255 aa16.03■□□□□ 0.16
SHKBP1-205ENST00000594973 GDPD1Q8N9F7 314 aa16.03■□□□□ 0.16
SHKBP1-205ENST00000594973 OR2L5Q8NG80 312 aa16.03■□□□□ 0.16
SHKBP1-205ENST00000594973 OR13H1Q8NG92 308 aa16.03■□□□□ 0.16
SHKBP1-205ENST00000594973 OR10G6Q8NH81 332 aa16.03■□□□□ 0.16
SHKBP1-205ENST00000594973 GPR151Q8TDV0 419 aa16.03■□□□□ 0.16
SHKBP1-205ENST00000594973 PATE1Q8WXA2 126 aa16.03■□□□□ 0.16
SHKBP1-205ENST00000594973 HDHD5Q9BXW7 423 aa16.03■□□□□ 0.16
SHKBP1-205ENST00000594973 C11orf54Q9H0W9 315 aaPredicted RBP16.03■□□□□ 0.16
SHKBP1-205ENST00000594973 GLIPR2Q9H4G4 154 aa16.03■□□□□ 0.16
SHKBP1-205ENST00000594973 SLC35C2Q9NQQ7 365 aa16.03■□□□□ 0.16
SHKBP1-205ENST00000594973 APOBEC3BQ9UH17 382 aaKnown RBP16.03■□□□□ 0.16
SHKBP1-205ENST00000594973 CYP8B1Q9UNU6 501 aa16.03■□□□□ 0.16
SHKBP1-205ENST00000594973 TNFRSF11BO00300 401 aa16.02■□□□□ 0.16
SHKBP1-205ENST00000594973 RGS5O15539 181 aa16.02■□□□□ 0.16
SHKBP1-205ENST00000594973 SLC22A5O76082 557 aa16.02■□□□□ 0.16
SHKBP1-205ENST00000594973 PTHP01270 115 aa16.02■□□□□ 0.16
SHKBP1-205ENST00000594973 F3P13726 295 aa16.02■□□□□ 0.16
SHKBP1-205ENST00000594973 PRKACAP17612 351 aa16.02■□□□□ 0.16
SHKBP1-205ENST00000594973 ATP5A1P25705 553 aaKnown RBP16.02■□□□□ 0.16
SHKBP1-205ENST00000594973 FRKP42685 505 aaPredicted RBP16.02■□□□□ 0.16
SHKBP1-205ENST00000594973 CDH12P55289 794 aa16.02■□□□□ 0.16
SHKBP1-205ENST00000594973 PSPHP78330 225 aa16.02■□□□□ 0.16
SHKBP1-205ENST00000594973 SPIBQ01892 262 aa16.02■□□□□ 0.16
SHKBP1-205ENST00000594973 BAMBIQ13145 260 aa16.02■□□□□ 0.16
SHKBP1-205ENST00000594973 GPR19Q15760 415 aa16.02■□□□□ 0.16
SHKBP1-205ENST00000594973 ZMAT1Q5H9K5 638 aa16.02■□□□□ 0.16
SHKBP1-205ENST00000594973 C18orf63Q68DL7 685 aa16.02■□□□□ 0.16
SHKBP1-205ENST00000594973 ZNF425Q6IV72 752 aa16.02■□□□□ 0.16
SHKBP1-205ENST00000594973 NRROSQ86YC3 692 aa16.02■□□□□ 0.16
SHKBP1-205ENST00000594973 TRIM48Q8IWZ4 208 aa16.02■□□□□ 0.16
SHKBP1-205ENST00000594973 KCT2Q8NC54 265 aa16.02■□□□□ 0.16
SHKBP1-205ENST00000594973 OTUB1Q96FW1 271 aaPredicted RBP16.02■□□□□ 0.16
SHKBP1-205ENST00000594973 HYLS1Q96M11 299 aa16.02■□□□□ 0.16
SHKBP1-205ENST00000594973 EPYCQ99645 322 aa16.02■□□□□ 0.16
SHKBP1-205ENST00000594973 FAIM2Q9BWQ8 316 aa16.02■□□□□ 0.16
SHKBP1-205ENST00000594973 PRRG3Q9BZD7 231 aa16.02■□□□□ 0.16
SHKBP1-205ENST00000594973 HSPB11Q9Y547 144 aa16.02■□□□□ 0.16
SHKBP1-205ENST00000594973 PCDHGB3Q9Y5G1 929 aa16.02■□□□□ 0.16
SHKBP1-205ENST00000594973 A0A1W2PR48 441 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms