RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 NKX2-2O95096 273 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 MSL3P1P0C860 447 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 ACP2P11117 423 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 PNLIPP16233 465 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 GLB1P16278 677 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 GABRB1P18505 474 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 CCNA2P20248 432 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 CHMP24386 653 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 FMO3P31513 532 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 SLC5A2P31639 672 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 PEX19P40855 299 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 GABRA4P48169 554 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 ARRB1P49407 418 aaPredicted RBP9.7□□□□□ -0.86
VPS25-203ENST00000589520 PDX1P52945 283 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 PSMD4P55036 377 aaKnown RBP9.7□□□□□ -0.86
VPS25-203ENST00000589520 OLR1P78380 273 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 POU6F2P78424 691 aaPredicted RBP9.7□□□□□ -0.86
VPS25-203ENST00000589520 EMX1Q04741 257 aaPredicted RBP9.7□□□□□ -0.86
VPS25-203ENST00000589520 MGAT2Q10469 447 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 TARDBPQ13148 414 aaKnown RBP eCLIP9.7□□□□□ -0.86
VPS25-203ENST00000589520 PIN1Q13526 163 aaPredicted RBP9.7□□□□□ -0.86
VPS25-203ENST00000589520 LTB4RQ15722 352 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 DECR1Q16698 335 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 TRMT12Q53H54 448 aaKnown RBP9.7□□□□□ -0.86
VPS25-203ENST00000589520 ENTPD8Q5MY95 495 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 DCST2Q5T1A1 773 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 GPR107Q5VW38 600 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 CWF19L1Q69YN2 538 aaKnown RBP9.7□□□□□ -0.86
VPS25-203ENST00000589520 PGBD2Q6P3X8 592 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 PODNL1Q6PEZ8 512 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 FAM111BQ6SJ93 734 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 CASP12Q6UXS9 341 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 FRRS1Q6ZNA5 592 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 LINC00299Q6ZSB3 139 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 RANBP3LQ86VV4 465 aaPredicted RBP9.7□□□□□ -0.86
VPS25-203ENST00000589520 ZNF761Q86XN6 746 aaPredicted RBP9.7□□□□□ -0.86
VPS25-203ENST00000589520 ANKRD13BQ86YJ7 626 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 OR4N5Q8IXE1 308 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 GALNT12Q8IXK2 581 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 RNF113BQ8IZP6 322 aaKnown RBP9.7□□□□□ -0.86
VPS25-203ENST00000589520 COX18Q8N8Q8 333 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 OR9Q2Q8NGE9 314 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 OR6T1Q8NGN1 323 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 OR8J1Q8NGP2 316 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 OR9A4Q8NGU2 314 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 SLC7A13Q8TCU3 470 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 CDS1Q92903 461 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 GTPBP3Q969Y2 492 aaKnown RBP9.7□□□□□ -0.86
VPS25-203ENST00000589520 DUSP23Q9BVJ7 150 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 RACGAP1Q9H0H5 632 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 EQTNQ9NQ60 294 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 C14orf105Q9NVL8 296 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 FKBP14Q9NWM8 211 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 NLGN3Q9NZ94 848 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 LRIT1Q9P2V4 623 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 FTSJ1Q9UET6 329 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 CFL2Q9Y281 166 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 ZNF443Q9Y2A4 671 aaPredicted RBP9.7□□□□□ -0.86
VPS25-203ENST00000589520 MMACHCQ9Y4U1 282 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 PCDHGA10Q9Y5H3 936 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 KCNE3Q9Y6H6 103 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 SLCO1B1Q9Y6L6 691 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 PLXND1Q9Y4D7 1925 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 BRWD1Q9NSI6 2320 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 IRGMA1A4Y4 181 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 ZNF860A6NHJ4 632 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 M0R3H8 397 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 YKT6O15498 198 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 FOXS1O43638 330 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 DUX1O43812 170 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 XPNPEP2O43895 674 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 LDB3O75112 727 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 DNAJB6O75190 326 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 SEMA7AO75326 666 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 RDH16O75452 317 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 HTR1AP08908 422 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 PIPP12273 146 aaPredicted RBP9.69□□□□□ -0.86
VPS25-203ENST00000589520 RPS4Y1P22090 263 aaKnown RBP9.69□□□□□ -0.86
VPS25-203ENST00000589520 EPHA2P29317 976 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 STAT5AP42229 794 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 IDH2P48735 452 aaKnown RBP9.69□□□□□ -0.86
VPS25-203ENST00000589520 PPM1FP49593 454 aaPredicted RBP9.69□□□□□ -0.86
VPS25-203ENST00000589520 CSNK1EP49674 416 aaKnown RBP9.69□□□□□ -0.86
VPS25-203ENST00000589520 ARL4DP49703 201 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 RGS8P57771 180 aaPredicted RBP9.69□□□□□ -0.86
VPS25-203ENST00000589520 PPP1CAP62136 330 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 HSD11B2P80365 405 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 TSPAN31Q12999 210 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 SQSTM1Q13501 440 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 TBCEQ15813 527 aaPredicted RBP9.69□□□□□ -0.86
VPS25-203ENST00000589520 OCLNQ16625 522 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 DUSP5Q16690 384 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 TMEM44Q2T9K0 475 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 DEFB133Q30KQ1 61 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 UBE2UQ5VVX9 321 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 RNLSQ5VYX0 342 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 PTCHD4Q6ZW05 846 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 RBM45Q8IUH3 476 aaKnown RBP9.69□□□□□ -0.86
VPS25-203ENST00000589520 LACC1Q8IV20 430 aa9.69□□□□□ -0.86
VPS25-203ENST00000589520 CCDC71Q8IV32 467 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms