RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 CCDC71Q8IV32 467 aaPredicted RBP9.94□□□□□ -0.82
USB1-212ENST00000566082 ZNF683Q8IZ20 524 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 KIAA1958Q8N8K9 716 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 TMEM163Q8TC26 289 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 CREB3L4Q8TEY5 395 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 LMLNQ96KR4 655 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 RNF208Q9H0X6 261 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.94□□□□□ -0.82
USB1-212ENST00000566082 TDP1Q9NUW8 608 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 FBXO10Q9UK96 956 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 DIMT1Q9UNQ2 313 aaKnown RBP9.94□□□□□ -0.82
USB1-212ENST00000566082 AK6Q9Y3D8 172 aaKnown RBP9.94□□□□□ -0.82
USB1-212ENST00000566082 NAALAD2Q9Y3Q0 740 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 A0A0G2JMP0 313 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 A0A0X1KG70 313 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 ADH1CP00326 375 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 IGLV3-27P01718 113 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 S100A9P06702 114 aaKnown RBP9.93□□□□□ -0.82
USB1-212ENST00000566082 CFL1P23528 166 aaKnown RBP9.93□□□□□ -0.82
USB1-212ENST00000566082 P2RX3P56373 397 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 TAS2R38P59533 333 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 GPLD1P80108 840 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 CAMK1Q14012 370 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 EFR3AQ14156 821 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 HSD17B12Q53GQ0 312 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 SYT14P1Q58G82 188 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 PXDC1Q5TGL8 231 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 PGBD2Q6P3X8 592 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 JAZF1Q86VZ6 243 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 NLGN4YQ8NFZ3 816 aaPredicted RBP9.93□□□□□ -0.82
USB1-212ENST00000566082 OR4M2Q8NGB6 313 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 IRF7Q92985 503 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 EID2BQ96D98 161 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 S100A16Q96FQ6 103 aaKnown RBP9.93□□□□□ -0.82
USB1-212ENST00000566082 DPH1Q9BZG8 443 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 TMEM184CQ9NVA4 438 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 QPCTLQ9NXS2 382 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 PCDHGB7Q9Y5F8 929 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 COL4A5P29400 1685 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 TRBV2A0A0J9YWF9 115 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 ZNF860A6NHJ4 632 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 PDCD5O14737 125 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 ARPC5O15511 151 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 ZNF780AO75290 641 aaPredicted RBP9.93□□□□□ -0.82
USB1-212ENST00000566082 UBXN7O94888 489 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 C1QBP02746 253 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 SOD2P04179 222 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 MMP11P24347 488 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 PPM1AP35813 382 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 SLC6A12P48065 614 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 TAS2R43P59537 309 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 GPR50Q13585 617 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 P2RY14Q15391 338 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 LRRC37A5PQ49AS3 106 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 ACSM5Q6NUN0 579 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 CREB3L2Q70SY1 520 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 TMCO2Q7Z6W1 182 aaPredicted RBP9.93□□□□□ -0.82
USB1-212ENST00000566082 OR4N5Q8IXE1 308 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 CCDC36Q8IYA8 594 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 FBXO15Q8NCQ5 510 aaPredicted RBP9.93□□□□□ -0.82
USB1-212ENST00000566082 CHTF18Q8WVB6 975 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 DPF3Q92784 378 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 PKMYT1Q99640 499 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 KATNB1Q9BVA0 655 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 POLDIP3Q9BY77 421 aaKnown RBP9.93□□□□□ -0.82
USB1-212ENST00000566082 LINC00597Q9H2U6 94 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 NT5DC2Q9H857 520 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 ZSCAN32Q9NX65 697 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 ANKRD31Q8N7Z5 1873 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 RGPD3A6NKT7 1758 aaPredicted RBP9.93□□□□□ -0.82
USB1-212ENST00000566082 RGPD4Q7Z3J3 1758 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 LOC100509620A0A075B734 347 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 SLC31A1O15431 190 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 LATO43561 262 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 TRIM3O75382 744 aaPredicted RBP9.93□□□□□ -0.82
USB1-212ENST00000566082 ITGA10O75578 1167 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 RP2O75695 350 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 GYPBP06028 91 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 CD6P30203 668 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 HLA-FP30511 346 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 GRPRP30550 384 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 BMPR1AP36894 532 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 BTN1A1Q13410 526 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 GALEQ14376 348 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 SSX1Q16384 188 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 FAAH2Q6GMR7 532 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 PSRC1Q6PGN9 363 aaPredicted RBP9.93□□□□□ -0.82
USB1-212ENST00000566082 SLC9B2Q86UD5 537 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 FAM124AQ86V42 546 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 OR6T1Q8NGN1 323 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 PRRC1Q96M27 445 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 SYT17Q9BSW7 474 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 TMEM38AQ9H6F2 299 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 MED20Q9H944 212 aa9.93□□□□□ -0.82
USB1-212ENST00000566082 TBC1D3DA0A087WVF3 549 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 TBC1D3IA0A087WXS9 549 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 TBC1D3EA0A087X179 549 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 TBC1D3KA0A087X1G2 549 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 TBC1D3FA6NER0 549 aaPredicted RBP9.92□□□□□ -0.82
USB1-212ENST00000566082 TBC1D3LB9A6J9 549 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms