RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 TRIM8Q9BZR9 551 aa15.28■□□□□ 0.04
USB1-211ENST00000565662 PTGES2Q9H7Z7 377 aa15.28■□□□□ 0.04
USB1-211ENST00000565662 CALHM2Q9HA72 323 aa15.28■□□□□ 0.04
USB1-211ENST00000565662 STOML1Q9UBI4 398 aa15.28■□□□□ 0.04
USB1-211ENST00000565662 DNAJC15Q9Y5T4 150 aa15.28■□□□□ 0.04
USB1-211ENST00000565662 ACTL7BQ9Y614 415 aa15.28■□□□□ 0.04
USB1-211ENST00000565662 PKDREJQ9NTG1 2253 aa15.27■□□□□ 0.04
USB1-211ENST00000565662 GNB5O14775 395 aa15.27■□□□□ 0.04
USB1-211ENST00000565662 RGS16O15492 202 aaPredicted RBP15.27■□□□□ 0.04
USB1-211ENST00000565662 KRT16P08779 473 aa15.27■□□□□ 0.04
USB1-211ENST00000565662 PRPS2P11908 318 aa15.27■□□□□ 0.04
USB1-211ENST00000565662 IGFBP2P18065 325 aa15.27■□□□□ 0.04
USB1-211ENST00000565662 MC3RP41968 323 aa15.27■□□□□ 0.04
USB1-211ENST00000565662 MLC1Q15049 377 aa15.27■□□□□ 0.04
USB1-211ENST00000565662 KRT71Q3SY84 523 aa15.27■□□□□ 0.04
USB1-211ENST00000565662 ACSF3Q4G176 576 aaPredicted RBP15.27■□□□□ 0.04
USB1-211ENST00000565662 SH2D4BQ5SQS7 431 aa15.27■□□□□ 0.04
USB1-211ENST00000565662 FNDC7Q5VTL7 733 aa15.27■□□□□ 0.04
USB1-211ENST00000565662 NSUN5P2Q63ZY6 315 aa15.27■□□□□ 0.04
USB1-211ENST00000565662 TMEM107Q6UX40 140 aa15.27■□□□□ 0.04
USB1-211ENST00000565662 CDRT4Q8N9R6 151 aa15.27■□□□□ 0.04
USB1-211ENST00000565662 FAM83FQ8NEG4 500 aaPredicted RBP15.27■□□□□ 0.04
USB1-211ENST00000565662 OR2W6PQ8NHA6 318 aa15.27■□□□□ 0.04
USB1-211ENST00000565662 OR14L1PQ8NHC6 308 aa15.27■□□□□ 0.04
USB1-211ENST00000565662 ZPLD1Q8TCW7 415 aa15.27■□□□□ 0.04
USB1-211ENST00000565662 RNF138Q8WVD3 245 aa15.27■□□□□ 0.04
USB1-211ENST00000565662 ELP4Q96EB1 424 aa15.27■□□□□ 0.04
USB1-211ENST00000565662 MS4A4EQ96PG1 132 aa15.27■□□□□ 0.04
USB1-211ENST00000565662 ADOQ96SZ5 270 aa15.27■□□□□ 0.04
USB1-211ENST00000565662 TIMP4Q99727 224 aa15.27■□□□□ 0.04
USB1-211ENST00000565662 LMF2Q9BU23 707 aaKnown RBP15.27■□□□□ 0.04
USB1-211ENST00000565662 GLIPR2Q9H4G4 154 aa15.27■□□□□ 0.04
USB1-211ENST00000565662 NEUROD4Q9HD90 331 aa15.27■□□□□ 0.04
USB1-211ENST00000565662 FAM120CQ9NX05 1096 aaKnown RBP15.27■□□□□ 0.04
USB1-211ENST00000565662 ALKBH4Q9NXW9 302 aa15.27■□□□□ 0.04
USB1-211ENST00000565662 CBLCQ9ULV8 474 aa15.27■□□□□ 0.04
USB1-211ENST00000565662 CELSR2Q9HCU4 2923 aa15.27■□□□□ 0.03
USB1-211ENST00000565662 TEX15Q9BXT5 2789 aa15.27■□□□□ 0.03
USB1-211ENST00000565662 ITPR2Q14571 2701 aa15.27■□□□□ 0.03
USB1-211ENST00000565662 NCKAP5O14513 1909 aa15.26■□□□□ 0.03
USB1-211ENST00000565662 FAM90A27PA6NNH2 459 aa15.26■□□□□ 0.03
USB1-211ENST00000565662 BIRC5O15392 142 aa15.26■□□□□ 0.03
USB1-211ENST00000565662 CTIFO43310 598 aaKnown RBP15.26■□□□□ 0.03
USB1-211ENST00000565662 TOXO94900 526 aa15.26■□□□□ 0.03
USB1-211ENST00000565662 LRATO95237 230 aa15.26■□□□□ 0.03
USB1-211ENST00000565662 GOSR1O95249 250 aa15.26■□□□□ 0.03
USB1-211ENST00000565662 CYP4B1P13584 511 aa15.26■□□□□ 0.03
USB1-211ENST00000565662 CPN1P15169 458 aa15.26■□□□□ 0.03
USB1-211ENST00000565662 SDC1P18827 310 aa15.26■□□□□ 0.03
USB1-211ENST00000565662 EVI2BP34910 448 aa15.26■□□□□ 0.03
USB1-211ENST00000565662 SOX18P35713 384 aa15.26■□□□□ 0.03
USB1-211ENST00000565662 FRKP42685 505 aaPredicted RBP15.26■□□□□ 0.03
USB1-211ENST00000565662 TRPC1P48995 793 aa15.26■□□□□ 0.03
USB1-211ENST00000565662 MANFP55145 182 aaKnown RBP15.26■□□□□ 0.03
USB1-211ENST00000565662 DSCR4P56555 118 aaPredicted RBP15.26■□□□□ 0.03
USB1-211ENST00000565662 EEFSECP57772 596 aaKnown RBP15.26■□□□□ 0.03
USB1-211ENST00000565662 PSG6Q00889 435 aa15.26■□□□□ 0.03
USB1-211ENST00000565662 TFF3Q07654 80 aa15.26■□□□□ 0.03
USB1-211ENST00000565662 PDE7AQ13946 482 aa15.26■□□□□ 0.03
USB1-211ENST00000565662 ARL13AQ5H913 290 aaPredicted RBP15.26■□□□□ 0.03
USB1-211ENST00000565662 CES4AQ5XG92 561 aa15.26■□□□□ 0.03
USB1-211ENST00000565662 BICRALQ6AI39 1079 aa15.26■□□□□ 0.03
USB1-211ENST00000565662 Q6ZSR9 355 aa15.26■□□□□ 0.03
USB1-211ENST00000565662 LRRC34Q8IZ02 419 aa15.26■□□□□ 0.03
USB1-211ENST00000565662 OR4K17Q8NGC6 315 aa15.26■□□□□ 0.03
USB1-211ENST00000565662 NODALQ96S42 347 aa15.26■□□□□ 0.03
USB1-211ENST00000565662 TM9SF2Q99805 663 aa15.26■□□□□ 0.03
USB1-211ENST00000565662 NTMQ9P121 344 aa15.26■□□□□ 0.03
USB1-211ENST00000565662 PPP4R1LQ9P1A2 415 aa15.26■□□□□ 0.03
USB1-211ENST00000565662 DKKL1Q9UK85 242 aa15.26■□□□□ 0.03
USB1-211ENST00000565662 CAMK2AQ9UQM7 478 aa15.26■□□□□ 0.03
USB1-211ENST00000565662 FIS1Q9Y3D6 152 aa15.26■□□□□ 0.03
USB1-211ENST00000565662 HRH3Q9Y5N1 445 aa15.26■□□□□ 0.03
USB1-211ENST00000565662 MBD3L4A6NDZ8 208 aaPredicted RBP15.25■□□□□ 0.03
USB1-211ENST00000565662 MBD3L3A6NE82 208 aaPredicted RBP15.25■□□□□ 0.03
USB1-211ENST00000565662 MBD3L5A6NJ08 208 aaPredicted RBP15.25■□□□□ 0.03
USB1-211ENST00000565662 UPK1AO00322 258 aa15.25■□□□□ 0.03
USB1-211ENST00000565662 ZNHIT1O43257 154 aa15.25■□□□□ 0.03
USB1-211ENST00000565662 ZWINTO95229 277 aa15.25■□□□□ 0.03
USB1-211ENST00000565662 IL33O95760 270 aa15.25■□□□□ 0.03
USB1-211ENST00000565662 IL18BPO95998 194 aa15.25■□□□□ 0.03
USB1-211ENST00000565662 BPGMP07738 259 aa15.25■□□□□ 0.03
USB1-211ENST00000565662 GRK2P25098 689 aa15.25■□□□□ 0.03
USB1-211ENST00000565662 OPRM1P35372 400 aa15.25■□□□□ 0.03
USB1-211ENST00000565662 PRIM2P49643 509 aa15.25■□□□□ 0.03
USB1-211ENST00000565662 ASCL1P50553 236 aa15.25■□□□□ 0.03
USB1-211ENST00000565662 CORO7P57737 925 aa15.25■□□□□ 0.03
USB1-211ENST00000565662 BCL2A1Q16548 175 aa15.25■□□□□ 0.03
USB1-211ENST00000565662 GALNTL6Q49A17 601 aa15.25■□□□□ 0.03
USB1-211ENST00000565662 RTL6Q6ICC9 239 aa15.25■□□□□ 0.03
USB1-211ENST00000565662 FAM180BQ6P0A1 224 aa15.25■□□□□ 0.03
USB1-211ENST00000565662 BHLHB9Q6PI77 547 aa15.25■□□□□ 0.03
USB1-211ENST00000565662 NPSR1Q6W5P4 371 aa15.25■□□□□ 0.03
USB1-211ENST00000565662 NCCRP1Q6ZVX7 275 aaPredicted RBP15.25■□□□□ 0.03
USB1-211ENST00000565662 MISPQ8IVT2 679 aa15.25■□□□□ 0.03
USB1-211ENST00000565662 DMRTC2Q8IXT2 367 aaPredicted RBP15.25■□□□□ 0.03
USB1-211ENST00000565662 OR6Y1Q8NGX8 325 aa15.25■□□□□ 0.03
USB1-211ENST00000565662 MBD3L2Q8NHZ7 208 aaPredicted RBP15.25■□□□□ 0.03
USB1-211ENST00000565662 MOAP1Q96BY2 351 aa15.25■□□□□ 0.03
USB1-211ENST00000565662 UCN2Q96RP3 112 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms