RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 SCRG1O75711 98 aa12.83□□□□□ -0.36
TPM1-215ENST00000558868 DBIP07108 87 aaKnown RBP12.83□□□□□ -0.36
TPM1-215ENST00000558868 ITGAMP11215 1152 aa12.83□□□□□ -0.36
TPM1-215ENST00000558868 PRKACGP22612 351 aa12.83□□□□□ -0.36
TPM1-215ENST00000558868 PDX1P52945 283 aa12.83□□□□□ -0.36
TPM1-215ENST00000558868 PPP1R8Q12972 351 aaKnown RBP12.83□□□□□ -0.36
TPM1-215ENST00000558868 DUSP8Q13202 625 aa12.83□□□□□ -0.36
TPM1-215ENST00000558868 IL18R1Q13478 541 aa12.83□□□□□ -0.36
TPM1-215ENST00000558868 IL11RAQ14626 422 aa12.83□□□□□ -0.36
TPM1-215ENST00000558868 ZSWIM7Q19AV6 140 aa12.83□□□□□ -0.36
TPM1-215ENST00000558868 MICAQ29983 383 aa12.83□□□□□ -0.36
TPM1-215ENST00000558868 MINDY4Q4G0A6 757 aa12.83□□□□□ -0.36
TPM1-215ENST00000558868 LIN52Q52LA3 116 aa12.83□□□□□ -0.36
TPM1-215ENST00000558868 AP1ARQ63HQ0 302 aa12.83□□□□□ -0.36
TPM1-215ENST00000558868 KDM4DQ6B0I6 523 aa12.83□□□□□ -0.36
TPM1-215ENST00000558868 TYW3Q6IPR3 259 aaKnown RBP12.83□□□□□ -0.36
TPM1-215ENST00000558868 FAHD1Q6P587 224 aa12.83□□□□□ -0.36
TPM1-215ENST00000558868 TMEM154Q6P9G4 183 aa12.83□□□□□ -0.36
TPM1-215ENST00000558868 FRRS1Q6ZNA5 592 aa12.83□□□□□ -0.36
TPM1-215ENST00000558868 DGAT2L6Q6ZPD8 337 aa12.83□□□□□ -0.36
TPM1-215ENST00000558868 PPP1R3BQ86XI6 285 aa12.83□□□□□ -0.36
TPM1-215ENST00000558868 SLITRK4Q8IW52 837 aa12.83□□□□□ -0.36
TPM1-215ENST00000558868 HS3ST5Q8IZT8 346 aa12.83□□□□□ -0.36
TPM1-215ENST00000558868 SHISA5Q8N114 240 aa12.83□□□□□ -0.36
TPM1-215ENST00000558868 LINC00471Q8N535 108 aa12.83□□□□□ -0.36
TPM1-215ENST00000558868 AGBL5Q8NDL9 886 aa12.83□□□□□ -0.36
TPM1-215ENST00000558868 OR4C15Q8NGM1 316 aa12.83□□□□□ -0.36
TPM1-215ENST00000558868 VANGL1Q8TAA9 524 aaPredicted RBP12.83□□□□□ -0.36
TPM1-215ENST00000558868 RHBDD1Q8TEB9 315 aa12.83□□□□□ -0.36
TPM1-215ENST00000558868 ARHGDIGQ99819 225 aa12.83□□□□□ -0.36
TPM1-215ENST00000558868 CNPPD1Q9BV87 410 aa12.83□□□□□ -0.36
TPM1-215ENST00000558868 YTHDF1Q9BYJ9 559 aaKnown RBP12.83□□□□□ -0.36
TPM1-215ENST00000558868 TGIF2Q9GZN2 237 aa12.83□□□□□ -0.36
TPM1-215ENST00000558868 ZNF556Q9HAH1 456 aa12.83□□□□□ -0.36
TPM1-215ENST00000558868 Q9N2J8 555 aa12.83□□□□□ -0.36
TPM1-215ENST00000558868 KRT84Q9NSB2 600 aa12.83□□□□□ -0.36
TPM1-215ENST00000558868 ACER3Q9NUN7 267 aa12.83□□□□□ -0.36
TPM1-215ENST00000558868 C14orf105Q9NVL8 296 aa12.83□□□□□ -0.36
TPM1-215ENST00000558868 FAM118AQ9NWS6 357 aa12.83□□□□□ -0.36
TPM1-215ENST00000558868 SIDT1Q9NXL6 827 aaKnown RBP12.83□□□□□ -0.36
TPM1-215ENST00000558868 UBAP1Q9NZ09 502 aa12.83□□□□□ -0.36
TPM1-215ENST00000558868 FTSJ1Q9UET6 329 aa12.83□□□□□ -0.36
TPM1-215ENST00000558868 CLDN16Q9Y5I7 305 aa12.83□□□□□ -0.36
TPM1-215ENST00000558868 RP1P56715 2156 aa12.83□□□□□ -0.36
TPM1-215ENST00000558868 TPRP12270 2363 aaKnown RBP12.83□□□□□ -0.36
TPM1-215ENST00000558868 DMDP11532 3685 aa12.82□□□□□ -0.36
TPM1-215ENST00000558868 ADAMTS20P59510 1910 aa12.82□□□□□ -0.36
TPM1-215ENST00000558868 SETXQ7Z333 2677 aaKnown RBP12.82□□□□□ -0.36
TPM1-215ENST00000558868 IGKV3D-11A0A0A0MRZ8 115 aa12.82□□□□□ -0.36
TPM1-215ENST00000558868 C17orf105B2RV13 164 aa12.82□□□□□ -0.36
TPM1-215ENST00000558868 SLC16A6O15403 523 aa12.82□□□□□ -0.36
TPM1-215ENST00000558868 CCNB2O95067 398 aa12.82□□□□□ -0.36
TPM1-215ENST00000558868 OXSR1O95747 527 aaPredicted RBP12.82□□□□□ -0.36
TPM1-215ENST00000558868 ONECUT2O95948 504 aa12.82□□□□□ -0.36
TPM1-215ENST00000558868 RECKO95980 971 aa12.82□□□□□ -0.36
TPM1-215ENST00000558868 H1F0P07305 194 aaKnown RBP12.82□□□□□ -0.36
TPM1-215ENST00000558868 TRHRP34981 398 aaPredicted RBP12.82□□□□□ -0.36
TPM1-215ENST00000558868 ID4P47928 161 aa12.82□□□□□ -0.36
TPM1-215ENST00000558868 EMDP50402 254 aa12.82□□□□□ -0.36
TPM1-215ENST00000558868 DAPP51397 102 aa12.82□□□□□ -0.36
TPM1-215ENST00000558868 PGDP52209 483 aa12.82□□□□□ -0.36
TPM1-215ENST00000558868 TPD52P55327 224 aaPredicted RBP12.82□□□□□ -0.36
TPM1-215ENST00000558868 RHAGQ02094 409 aa12.82□□□□□ -0.36
TPM1-215ENST00000558868 OCA2Q04671 838 aa12.82□□□□□ -0.36
TPM1-215ENST00000558868 ELAVL1Q15717 326 aaKnown RBP12.82□□□□□ -0.36
TPM1-215ENST00000558868 ZIK1Q3SY52 487 aaPredicted RBP12.82□□□□□ -0.36
TPM1-215ENST00000558868 CYP27C1Q4G0S4 372 aa12.82□□□□□ -0.36
TPM1-215ENST00000558868 C1orf189Q5VU69 101 aa12.82□□□□□ -0.36
TPM1-215ENST00000558868 TCTN3Q6NUS6 607 aa12.82□□□□□ -0.36
TPM1-215ENST00000558868 DEF8Q6ZN54 512 aa12.82□□□□□ -0.36
TPM1-215ENST00000558868 PRR23CQ6ZRP0 262 aa12.82□□□□□ -0.36
TPM1-215ENST00000558868 USP51Q70EK9 711 aa12.82□□□□□ -0.36
TPM1-215ENST00000558868 WDR53Q7Z5U6 358 aaPredicted RBP12.82□□□□□ -0.36
TPM1-215ENST00000558868 TMEM151BQ8IW70 566 aa12.82□□□□□ -0.36
TPM1-215ENST00000558868 RCBTB1Q8NDN9 531 aa12.82□□□□□ -0.36
TPM1-215ENST00000558868 SIMC1Q8NDZ2 872 aa12.82□□□□□ -0.36
TPM1-215ENST00000558868 PLPP5Q8NEB5 264 aa12.82□□□□□ -0.36
TPM1-215ENST00000558868 OR10G2Q8NGC3 310 aa12.82□□□□□ -0.36
TPM1-215ENST00000558868 OR14A16Q8NHC5 309 aa12.82□□□□□ -0.36
TPM1-215ENST00000558868 DOK4Q8TEW6 326 aa12.82□□□□□ -0.36
TPM1-215ENST00000558868 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.82□□□□□ -0.36
TPM1-215ENST00000558868 DAZLQ92904 295 aaKnown RBP12.82□□□□□ -0.36
TPM1-215ENST00000558868 CLIP3Q96DZ5 547 aa12.82□□□□□ -0.36
TPM1-215ENST00000558868 DHRS1Q96LJ7 313 aa12.82□□□□□ -0.36
TPM1-215ENST00000558868 G6PC3Q9BUM1 346 aa12.82□□□□□ -0.36
TPM1-215ENST00000558868 POLR2J2Q9GZM3 115 aaKnown RBP12.82□□□□□ -0.36
TPM1-215ENST00000558868 POLR2J3Q9H1A7 115 aaKnown RBP12.82□□□□□ -0.36
TPM1-215ENST00000558868 OR10A5Q9H207 317 aa12.82□□□□□ -0.36
TPM1-215ENST00000558868 SMOC1Q9H4F8 434 aa12.82□□□□□ -0.36
TPM1-215ENST00000558868 ZNF696Q9H7X3 374 aa12.82□□□□□ -0.36
TPM1-215ENST00000558868 PNO1Q9NRX1 252 aaKnown RBP12.82□□□□□ -0.36
TPM1-215ENST00000558868 AKAP7Q9P0M2 348 aaPredicted RBP12.82□□□□□ -0.36
TPM1-215ENST00000558868 TMEFF2Q9UIK5 374 aaPredicted RBP12.82□□□□□ -0.36
TPM1-215ENST00000558868 ACAD8Q9UKU7 415 aa12.82□□□□□ -0.36
TPM1-215ENST00000558868 ERVK-19Q9WJR5 959 aa12.82□□□□□ -0.36
TPM1-215ENST00000558868 ZNF443Q9Y2A4 671 aaPredicted RBP12.82□□□□□ -0.36
TPM1-215ENST00000558868 MYRFQ9Y2G1 1151 aa12.82□□□□□ -0.36
TPM1-215ENST00000558868 CLCA3PQ9Y6N3 262 aa12.82□□□□□ -0.36
TPM1-215ENST00000558868 IGLV3-12A0A075B6K2 115 aa12.81□□□□□ -0.36
TPM1-215ENST00000558868 TCRBV16S1A1N1A0A5B0 115 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms