RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 SLITRK5O94991 958 aa14.76□□□□□ -0.05
DDX55-212ENST00000544738 IL2RAP01589 272 aa14.76□□□□□ -0.05
DDX55-212ENST00000544738 DDCP20711 480 aa14.76□□□□□ -0.05
DDX55-212ENST00000544738 CEACAM8P31997 349 aaPredicted RBP14.76□□□□□ -0.05
DDX55-212ENST00000544738 TIMP3P35625 211 aa14.76□□□□□ -0.05
DDX55-212ENST00000544738 KRT20P35900 424 aa14.76□□□□□ -0.05
DDX55-212ENST00000544738 DNAJB13P59910 316 aa14.76□□□□□ -0.05
DDX55-212ENST00000544738 ACSF3Q4G176 576 aaPredicted RBP14.76□□□□□ -0.05
DDX55-212ENST00000544738 SCIMPQ6UWF3 145 aa14.76□□□□□ -0.05
DDX55-212ENST00000544738 FRMD7Q6ZUT3 714 aa14.76□□□□□ -0.05
DDX55-212ENST00000544738 SH2D5Q6ZV89 423 aa14.76□□□□□ -0.05
DDX55-212ENST00000544738 P3H2Q8IVL5 708 aa14.76□□□□□ -0.05
DDX55-212ENST00000544738 FAM76AQ8TAV0 307 aa14.76□□□□□ -0.05
DDX55-212ENST00000544738 KAT2AQ92830 837 aa14.76□□□□□ -0.05
DDX55-212ENST00000544738 COX4I2Q96KJ9 171 aa14.76□□□□□ -0.05
DDX55-212ENST00000544738 COL21A1Q96P44 957 aa14.76□□□□□ -0.05
DDX55-212ENST00000544738 BBS4Q96RK4 519 aa14.76□□□□□ -0.05
DDX55-212ENST00000544738 KCNA7Q96RP8 456 aa14.76□□□□□ -0.05
DDX55-212ENST00000544738 NODALQ96S42 347 aa14.76□□□□□ -0.05
DDX55-212ENST00000544738 RRAGDQ9NQL2 400 aaPredicted RBP14.76□□□□□ -0.05
DDX55-212ENST00000544738 BEX4Q9NWD9 120 aaPredicted RBP14.76□□□□□ -0.05
DDX55-212ENST00000544738 EXPH5Q8NEV8 1989 aa14.75□□□□□ -0.05
DDX55-212ENST00000544738 PRAMEF25A6NGN4 478 aa14.75□□□□□ -0.05
DDX55-212ENST00000544738 UBFD1O14562 309 aaKnown RBP14.75□□□□□ -0.05
DDX55-212ENST00000544738 SNPHO15079 494 aa14.75□□□□□ -0.05
DDX55-212ENST00000544738 PLIN3O60664 434 aa14.75□□□□□ -0.05
DDX55-212ENST00000544738 ERN1O75460 977 aaKnown RBP14.75□□□□□ -0.05
DDX55-212ENST00000544738 ACTL6AO96019 429 aa14.75□□□□□ -0.05
DDX55-212ENST00000544738 CPA3P15088 417 aa14.75□□□□□ -0.05
DDX55-212ENST00000544738 BMP7P18075 431 aa14.75□□□□□ -0.05
DDX55-212ENST00000544738 CD53P19397 219 aa14.75□□□□□ -0.05
DDX55-212ENST00000544738 TACR1P25103 407 aa14.75□□□□□ -0.05
DDX55-212ENST00000544738 CRHR1P34998 444 aa14.75□□□□□ -0.05
DDX55-212ENST00000544738 MRPS22P82650 360 aaKnown RBP14.75□□□□□ -0.05
DDX55-212ENST00000544738 C2orf80Q0P641 193 aa14.75□□□□□ -0.05
DDX55-212ENST00000544738 EFR3AQ14156 821 aa14.75□□□□□ -0.05
DDX55-212ENST00000544738 EIPR1Q53HC9 387 aa14.75□□□□□ -0.05
DDX55-212ENST00000544738 WIPI1Q5MNZ9 446 aaPredicted RBP14.75□□□□□ -0.05
DDX55-212ENST00000544738 NSUN5P2Q63ZY6 315 aa14.75□□□□□ -0.05
DDX55-212ENST00000544738 SEM1Q6ZVN7 128 aa14.75□□□□□ -0.05
DDX55-212ENST00000544738 TRIM46Q7Z4K8 759 aa14.75□□□□□ -0.05
DDX55-212ENST00000544738 HOMEZQ8IX15 550 aa14.75□□□□□ -0.05
DDX55-212ENST00000544738 GSPT2Q8IYD1 628 aaKnown RBP14.75□□□□□ -0.05
DDX55-212ENST00000544738 CCDC63Q8NA47 563 aa14.75□□□□□ -0.05
DDX55-212ENST00000544738 FAM83FQ8NEG4 500 aaPredicted RBP14.75□□□□□ -0.05
DDX55-212ENST00000544738 OR9A2Q8NGT5 310 aa14.75□□□□□ -0.05
DDX55-212ENST00000544738 ABTB1Q969K4 478 aaPredicted RBP14.75□□□□□ -0.05
DDX55-212ENST00000544738 TMBIM1Q969X1 311 aa14.75□□□□□ -0.05
DDX55-212ENST00000544738 SLC35A4Q96G79 324 aa14.75□□□□□ -0.05
DDX55-212ENST00000544738 METTL2AQ96IZ6 378 aaKnown RBP14.75□□□□□ -0.05
DDX55-212ENST00000544738 EBPLQ9BY08 206 aa14.75□□□□□ -0.05
DDX55-212ENST00000544738 UGT2B28Q9BY64 529 aa14.75□□□□□ -0.05
DDX55-212ENST00000544738 GALNT9Q9HCQ5 603 aa14.75□□□□□ -0.05
DDX55-212ENST00000544738 MIEF1Q9NQG6 463 aa14.75□□□□□ -0.05
DDX55-212ENST00000544738 OXSMQ9NWU1 459 aa14.75□□□□□ -0.05
DDX55-212ENST00000544738 TAS2R7Q9NYW3 318 aa14.75□□□□□ -0.05
DDX55-212ENST00000544738 ZNF629Q9UEG4 869 aaPredicted RBP14.75□□□□□ -0.05
DDX55-212ENST00000544738 MID2Q9UJV3 735 aa14.75□□□□□ -0.05
DDX55-212ENST00000544738 CAMK2AQ9UQM7 478 aa14.75□□□□□ -0.05
DDX55-212ENST00000544738 SLC6A5Q9Y345 797 aa14.75□□□□□ -0.05
DDX55-212ENST00000544738 FREM3P0C091 2139 aa14.75□□□□□ -0.05
DDX55-212ENST00000544738 ARID1AO14497 2285 aa14.75□□□□□ -0.05
DDX55-212ENST00000544738 TUBAL3A6NHL2 446 aa14.74□□□□□ -0.05
DDX55-212ENST00000544738 CD8B2A6NJW9 211 aa14.74□□□□□ -0.05
DDX55-212ENST00000544738 RNF212BA8MTL3 300 aa14.74□□□□□ -0.05
DDX55-212ENST00000544738 MYO1GB0I1T2 1018 aa14.74□□□□□ -0.05
DDX55-212ENST00000544738 COPEO14579 308 aa14.74□□□□□ -0.05
DDX55-212ENST00000544738 RSL1D1O76021 490 aaKnown RBP14.74□□□□□ -0.05
DDX55-212ENST00000544738 SHBGP04278 402 aa14.74□□□□□ -0.05
DDX55-212ENST00000544738 CT45A8P0DMV1 189 aa14.74□□□□□ -0.05
DDX55-212ENST00000544738 CT45A9P0DMV2 189 aa14.74□□□□□ -0.05
DDX55-212ENST00000544738 UROSP10746 265 aa14.74□□□□□ -0.05
DDX55-212ENST00000544738 EPXP11678 715 aa14.74□□□□□ -0.05
DDX55-212ENST00000544738 BMP5P22003 454 aa14.74□□□□□ -0.05
DDX55-212ENST00000544738 IL12BP29460 328 aa14.74□□□□□ -0.05
DDX55-212ENST00000544738 PTGDSP41222 190 aa14.74□□□□□ -0.05
DDX55-212ENST00000544738 SLCO1A2P46721 670 aa14.74□□□□□ -0.05
DDX55-212ENST00000544738 PNLIPRP2P54317 469 aa14.74□□□□□ -0.05
DDX55-212ENST00000544738 FOXA1P55317 472 aa14.74□□□□□ -0.05
DDX55-212ENST00000544738 CT45A2Q5DJT8 189 aa14.74□□□□□ -0.05
DDX55-212ENST00000544738 Q5PR19 223 aa14.74□□□□□ -0.05
DDX55-212ENST00000544738 DESI1Q6ICB0 168 aa14.74□□□□□ -0.05
DDX55-212ENST00000544738 RNASE6Q93091 150 aaKnown RBP14.74□□□□□ -0.05
DDX55-212ENST00000544738 VSTM2LQ96N03 204 aa14.74□□□□□ -0.05
DDX55-212ENST00000544738 ADOQ96SZ5 270 aa14.74□□□□□ -0.05
DDX55-212ENST00000544738 ANKRA2Q9H9E1 313 aa14.74□□□□□ -0.05
DDX55-212ENST00000544738 CALHM2Q9HA72 323 aa14.74□□□□□ -0.05
DDX55-212ENST00000544738 MYNNQ9NPC7 610 aa14.74□□□□□ -0.05
DDX55-212ENST00000544738 ARHGAP21Q5T5U3 1957 aa14.74□□□□□ -0.05
DDX55-212ENST00000544738 A0A087WV62 115 aa14.73□□□□□ -0.05
DDX55-212ENST00000544738 C2orf72A6NCS6 295 aa14.73□□□□□ -0.05
DDX55-212ENST00000544738 COQ9O75208 318 aa14.73□□□□□ -0.05
DDX55-212ENST00000544738 CPN1P15169 458 aa14.73□□□□□ -0.05
DDX55-212ENST00000544738 CORO7P57737 925 aa14.73□□□□□ -0.05
DDX55-212ENST00000544738 RCAN2Q14206 197 aa14.73□□□□□ -0.05
DDX55-212ENST00000544738 POU4F3Q15319 338 aa14.73□□□□□ -0.05
DDX55-212ENST00000544738 FAM71E1Q6IPT2 247 aa14.73□□□□□ -0.05
DDX55-212ENST00000544738 ENPP6Q6UWR7 440 aa14.73□□□□□ -0.05
DDX55-212ENST00000544738 IKBIPQ70UQ0 350 aa14.73□□□□□ -0.05
DDX55-212ENST00000544738 LARP4Q71RC2 724 aaKnown RBP eCLIP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms