RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 TAS2R38P59533 333 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 TMEM69Q5SWH9 247 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 SLC35F2Q8IXU6 374 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 ZNF100Q8IYN0 542 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 OR2T4Q8NH00 348 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 GPBAR1Q8TDU6 330 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 DAZLQ92904 295 aaKnown RBP7.42□□□□□ -1.22
VPS13D-211ENST00000543710 TRMT2BQ96GJ1 504 aaKnown RBP7.42□□□□□ -1.22
VPS13D-211ENST00000543710 C16orf58Q96GQ5 468 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 OR2M2Q96R28 347 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 CITED4Q96RK1 184 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 GABARAPL1Q9H0R8 117 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 FZD3Q9NPG1 666 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 PRTFDC1Q9NRG1 225 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 RYDENQ9NUL5 291 aaKnown RBP7.42□□□□□ -1.22
VPS13D-211ENST00000543710 GPATCH2Q9NW75 528 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 EXTL2Q9UBQ6 330 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 ETV7Q9Y603 341 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 A0A1W2PP55 124 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 MTMR11A4FU01 709 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 TRIM64BA6NI03 449 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 ERI3O43414 337 aaKnown RBP7.42□□□□□ -1.22
VPS13D-211ENST00000543710 MAFKO60675 156 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 ADAMTS4O75173 837 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 GPR32O75388 356 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 RAB40ALP0C0E4 278 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 ACP5P13686 325 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 CASP9P55211 416 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 VSX2P58304 361 aaPredicted RBP7.42□□□□□ -1.22
VPS13D-211ENST00000543710 TAP2Q03519 686 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 CBFBQ13951 182 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 GRM7Q14831 915 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 SLC35F1Q5T1Q4 408 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 ZNF691Q5VV52 312 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 LIPNQ5VXI9 398 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 TMEM53Q6P2H8 277 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 ZNF613Q6PF04 617 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 MAMDC2Q7Z304 686 aaPredicted RBP7.42□□□□□ -1.22
VPS13D-211ENST00000543710 NUP43Q8NFH3 380 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 BEST4Q8NFU0 473 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 RAB40AQ8WXH6 277 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 COQ8BQ96D53 544 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 CNTNAP3BQ96NU0 1288 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 LPAR4Q99677 370 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 PRRT1Q99946 306 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 LMF2Q9BU23 707 aaKnown RBP7.42□□□□□ -1.22
VPS13D-211ENST00000543710 RGCCQ9H4X1 137 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 CWH43Q9H720 699 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 RNF11Q9Y3C5 154 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 LRP3O75074 770 aa7.41□□□□□ -1.22
VPS13D-211ENST00000543710 THBS3P49746 956 aa7.41□□□□□ -1.22
VPS13D-211ENST00000543710 RAB5CP51148 216 aa7.41□□□□□ -1.22
VPS13D-211ENST00000543710 TAS2R20P59543 309 aa7.41□□□□□ -1.22
VPS13D-211ENST00000543710 UBE2NP61088 152 aaKnown RBP7.41□□□□□ -1.22
VPS13D-211ENST00000543710 PCDH1Q08174 1060 aa7.41□□□□□ -1.22
VPS13D-211ENST00000543710 ARFRP1Q13795 201 aa7.41□□□□□ -1.22
VPS13D-211ENST00000543710 GPR176Q14439 515 aa7.41□□□□□ -1.22
VPS13D-211ENST00000543710 ZNF460Q14592 562 aa7.41□□□□□ -1.22
VPS13D-211ENST00000543710 SIX1Q15475 284 aaPredicted RBP7.41□□□□□ -1.22
VPS13D-211ENST00000543710 AKIRIN2Q53H80 203 aa7.41□□□□□ -1.22
VPS13D-211ENST00000543710 XKR5Q6UX68 686 aa7.41□□□□□ -1.22
VPS13D-211ENST00000543710 ADAMTS14Q8WXS8 1223 aa7.41□□□□□ -1.22
VPS13D-211ENST00000543710 ELP4Q96EB1 424 aa7.41□□□□□ -1.22
VPS13D-211ENST00000543710 ZNF285Q96NJ3 590 aa7.41□□□□□ -1.22
VPS13D-211ENST00000543710 SEMA4GQ9NTN9 838 aa7.41□□□□□ -1.22
VPS13D-211ENST00000543710 CD84Q9UIB8 345 aa7.41□□□□□ -1.22
VPS13D-211ENST00000543710 PCTPQ9UKL6 214 aa7.41□□□□□ -1.22
VPS13D-211ENST00000543710 NAALAD2Q9Y3Q0 740 aa7.41□□□□□ -1.22
VPS13D-211ENST00000543710 PCDHGA7Q9Y5G6 932 aa7.41□□□□□ -1.22
VPS13D-211ENST00000543710 TOR1AO14656 332 aa7.41□□□□□ -1.22
VPS13D-211ENST00000543710 HCKP08631 526 aa7.41□□□□□ -1.22
VPS13D-211ENST00000543710 H2BFMP0C1H6 154 aa7.41□□□□□ -1.22
VPS13D-211ENST00000543710 AKAIN1P0CW23 69 aa7.41□□□□□ -1.22
VPS13D-211ENST00000543710 CERS1P27544 350 aa7.41□□□□□ -1.22
VPS13D-211ENST00000543710 PKLRP30613 574 aa7.41□□□□□ -1.22
VPS13D-211ENST00000543710 GGT2P36268 569 aa7.41□□□□□ -1.22
VPS13D-211ENST00000543710 VIPR2P41587 438 aa7.41□□□□□ -1.22
VPS13D-211ENST00000543710 EPHA4P54764 986 aa7.41□□□□□ -1.22
VPS13D-211ENST00000543710 AIMP2Q13155 320 aaKnown RBP7.41□□□□□ -1.22
VPS13D-211ENST00000543710 MEP1AQ16819 746 aa7.41□□□□□ -1.22
VPS13D-211ENST00000543710 TBRG1Q3YBR2 411 aa7.41□□□□□ -1.22
VPS13D-211ENST00000543710 CES4AQ5XG92 561 aa7.41□□□□□ -1.22
VPS13D-211ENST00000543710 CD300LGQ6UXG3 332 aa7.41□□□□□ -1.22
VPS13D-211ENST00000543710 SLC22A15Q8IZD6 547 aa7.41□□□□□ -1.22
VPS13D-211ENST00000543710 L3MBTL4Q8NA19 623 aa7.41□□□□□ -1.22
VPS13D-211ENST00000543710 OR9A4Q8NGU2 314 aa7.41□□□□□ -1.22
VPS13D-211ENST00000543710 OR2L2Q8NH16 312 aa7.41□□□□□ -1.22
VPS13D-211ENST00000543710 TERB2Q8NHR7 220 aa7.41□□□□□ -1.22
VPS13D-211ENST00000543710 ARL11Q969Q4 196 aa7.41□□□□□ -1.22
VPS13D-211ENST00000543710 MCHR1Q99705 422 aa7.41□□□□□ -1.22
VPS13D-211ENST00000543710 B3GNT4Q9C0J1 378 aa7.41□□□□□ -1.22
VPS13D-211ENST00000543710 SLC5A7Q9GZV3 580 aa7.41□□□□□ -1.22
VPS13D-211ENST00000543710 OR51V1Q9H2C8 321 aa7.41□□□□□ -1.22
VPS13D-211ENST00000543710 MOKQ9UQ07 419 aa7.41□□□□□ -1.22
VPS13D-211ENST00000543710 A0A0D9SG52 128 aa7.41□□□□□ -1.22
VPS13D-211ENST00000543710 OR2B3O76000 313 aa7.41□□□□□ -1.22
VPS13D-211ENST00000543710 TNFSF15O95150 251 aa7.41□□□□□ -1.22
VPS13D-211ENST00000543710 PTHP01270 115 aa7.41□□□□□ -1.22
VPS13D-211ENST00000543710 MLLT11Q13015 90 aaPredicted RBP7.41□□□□□ -1.22
VPS13D-211ENST00000543710 RFPL4BQ6ZWI9 263 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms