RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 PLGLB1Q02325 96 aa11.77□□□□□ -0.53
VEGFA-224ENST00000523873 MRPL49Q13405 166 aaKnown RBP11.77□□□□□ -0.53
VEGFA-224ENST00000523873 GTDC1Q4AE62 458 aa11.77□□□□□ -0.53
VEGFA-224ENST00000523873 AGKQ53H12 422 aa11.77□□□□□ -0.53
VEGFA-224ENST00000523873 EXOSC6Q5RKV6 272 aaKnown RBP11.77□□□□□ -0.53
VEGFA-224ENST00000523873 CCNJQ5T5M9 372 aa11.77□□□□□ -0.53
VEGFA-224ENST00000523873 ZNF324BQ6AW86 544 aaPredicted RBP11.77□□□□□ -0.53
VEGFA-224ENST00000523873 FIGNL1Q6PIW4 674 aa11.77□□□□□ -0.53
VEGFA-224ENST00000523873 SLC2A7Q6PXP3 512 aa11.77□□□□□ -0.53
VEGFA-224ENST00000523873 GK5Q6ZS86 529 aa11.77□□□□□ -0.53
VEGFA-224ENST00000523873 C6orf120Q7Z4R8 191 aa11.77□□□□□ -0.53
VEGFA-224ENST00000523873 DND1Q8IYX4 353 aaKnown RBP11.77□□□□□ -0.53
VEGFA-224ENST00000523873 CDRT4Q8N9R6 151 aa11.77□□□□□ -0.53
VEGFA-224ENST00000523873 VPS37AQ8NEZ2 397 aa11.77□□□□□ -0.53
VEGFA-224ENST00000523873 OR56A1Q8NGH5 318 aa11.77□□□□□ -0.53
VEGFA-224ENST00000523873 OR5D16Q8NGK9 328 aa11.77□□□□□ -0.53
VEGFA-224ENST00000523873 STON2Q8WXE9 905 aa11.77□□□□□ -0.53
VEGFA-224ENST00000523873 CDS1Q92903 461 aa11.77□□□□□ -0.53
VEGFA-224ENST00000523873 SLC35A4Q96G79 324 aa11.77□□□□□ -0.53
VEGFA-224ENST00000523873 SLC35G5Q96KT7 338 aa11.77□□□□□ -0.53
VEGFA-224ENST00000523873 JSRP1Q96MG2 331 aaPredicted RBP11.77□□□□□ -0.53
VEGFA-224ENST00000523873 CCDC115Q96NT0 180 aa11.77□□□□□ -0.53
VEGFA-224ENST00000523873 COL21A1Q96P44 957 aa11.77□□□□□ -0.53
VEGFA-224ENST00000523873 PANX1Q96RD7 426 aa11.77□□□□□ -0.53
VEGFA-224ENST00000523873 SIKE1Q9BRV8 207 aa11.77□□□□□ -0.53
VEGFA-224ENST00000523873 SLC35A5Q9BS91 424 aa11.77□□□□□ -0.53
VEGFA-224ENST00000523873 ZNF385DQ9H6B1 395 aa11.77□□□□□ -0.53
VEGFA-224ENST00000523873 Q9N2J8 555 aa11.77□□□□□ -0.53
VEGFA-224ENST00000523873 SERHLQ9NQF3 203 aa11.77□□□□□ -0.53
VEGFA-224ENST00000523873 SLC6A13Q9NSD5 602 aa11.77□□□□□ -0.53
VEGFA-224ENST00000523873 OLAHQ9NV23 265 aa11.77□□□□□ -0.53
VEGFA-224ENST00000523873 GPATCH2Q9NW75 528 aa11.77□□□□□ -0.53
VEGFA-224ENST00000523873 FBXO34Q9NWN3 711 aa11.77□□□□□ -0.53
VEGFA-224ENST00000523873 BTNL2Q9UIR0 455 aa11.77□□□□□ -0.53
VEGFA-224ENST00000523873 HRH3Q9Y5N1 445 aa11.77□□□□□ -0.53
VEGFA-224ENST00000523873 NBASA2RRP1 2371 aa11.76□□□□□ -0.53
VEGFA-224ENST00000523873 HEATR5AQ86XA9 2040 aa11.76□□□□□ -0.53
VEGFA-224ENST00000523873 CCDC154A6NI56 674 aa11.76□□□□□ -0.53
VEGFA-224ENST00000523873 C17orf51A8MQB3 221 aa11.76□□□□□ -0.53
VEGFA-224ENST00000523873 NPIPA5E9PKD4 350 aa11.76□□□□□ -0.53
VEGFA-224ENST00000523873 HS6ST1O60243 411 aa11.76□□□□□ -0.53
VEGFA-224ENST00000523873 ICOSLGO75144 302 aa11.76□□□□□ -0.53
VEGFA-224ENST00000523873 CRYABP02511 175 aaKnown RBP11.76□□□□□ -0.53
VEGFA-224ENST00000523873 IL6P05231 212 aa11.76□□□□□ -0.53
VEGFA-224ENST00000523873 NAGAP17050 411 aa11.76□□□□□ -0.53
VEGFA-224ENST00000523873 CAPN3P20807 821 aa11.76□□□□□ -0.53
VEGFA-224ENST00000523873 MATN1P21941 496 aa11.76□□□□□ -0.53
VEGFA-224ENST00000523873 UQCRC2P22695 453 aa11.76□□□□□ -0.53
VEGFA-224ENST00000523873 GNLYP22749 145 aa11.76□□□□□ -0.53
VEGFA-224ENST00000523873 CASP3P42574 277 aa11.76□□□□□ -0.53
VEGFA-224ENST00000523873 ATP4BP51164 291 aa11.76□□□□□ -0.53
VEGFA-224ENST00000523873 TDGF1P3P51864 188 aa11.76□□□□□ -0.53
VEGFA-224ENST00000523873 GNGT1P63211 74 aa11.76□□□□□ -0.53
VEGFA-224ENST00000523873 KCNJ2P63252 427 aa11.76□□□□□ -0.53
VEGFA-224ENST00000523873 MRPS22P82650 360 aaKnown RBP11.76□□□□□ -0.53
VEGFA-224ENST00000523873 CDC73Q6P1J9 531 aa11.76□□□□□ -0.53
VEGFA-224ENST00000523873 ZNF621Q6ZSS3 439 aa11.76□□□□□ -0.53
VEGFA-224ENST00000523873 OLIG3Q7RTU3 272 aa11.76□□□□□ -0.53
VEGFA-224ENST00000523873 NUP54Q7Z3B4 507 aa11.76□□□□□ -0.53
VEGFA-224ENST00000523873 ZAR1Q86SH2 424 aa11.76□□□□□ -0.53
VEGFA-224ENST00000523873 COX18Q8N8Q8 333 aa11.76□□□□□ -0.53
VEGFA-224ENST00000523873 ZFP62Q8NB50 900 aaPredicted RBP11.76□□□□□ -0.53
VEGFA-224ENST00000523873 C10orf82Q8WW14 230 aa11.76□□□□□ -0.53
VEGFA-224ENST00000523873 NR4A3Q92570 626 aa11.76□□□□□ -0.53
VEGFA-224ENST00000523873 MOAP1Q96BY2 351 aa11.76□□□□□ -0.53
VEGFA-224ENST00000523873 OR7D2Q96RA2 312 aa11.76□□□□□ -0.53
VEGFA-224ENST00000523873 BARD1Q99728 777 aaKnown RBP11.76□□□□□ -0.53
VEGFA-224ENST00000523873 FAM173AQ9BQD7 235 aa11.76□□□□□ -0.53
VEGFA-224ENST00000523873 ACTRT3Q9BYD9 372 aa11.76□□□□□ -0.53
VEGFA-224ENST00000523873 TTTY12Q9BZ98 90 aa11.76□□□□□ -0.53
VEGFA-224ENST00000523873 FAM107BQ9H098 131 aa11.76□□□□□ -0.53
VEGFA-224ENST00000523873 RABEP2Q9H5N1 569 aa11.76□□□□□ -0.53
VEGFA-224ENST00000523873 METTL7AQ9H8H3 244 aa11.76□□□□□ -0.53
VEGFA-224ENST00000523873 AGPAT4Q9NRZ5 378 aa11.76□□□□□ -0.53
VEGFA-224ENST00000523873 CNIH4Q9P003 139 aa11.76□□□□□ -0.53
VEGFA-224ENST00000523873 KLHL14Q9P2G3 628 aa11.76□□□□□ -0.53
VEGFA-224ENST00000523873 NPIPA1Q9UND3 350 aa11.76□□□□□ -0.53
VEGFA-224ENST00000523873 FAF1Q9UNN5 650 aaPredicted RBP11.76□□□□□ -0.53
VEGFA-224ENST00000523873 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.76□□□□□ -0.53
VEGFA-224ENST00000523873 MED12Q93074 2177 aa11.76□□□□□ -0.53
VEGFA-224ENST00000523873 NPIPA5A0A0B4J1W7 369 aa11.75□□□□□ -0.53
VEGFA-224ENST00000523873 PRAMEF25A6NGN4 478 aa11.75□□□□□ -0.53
VEGFA-224ENST00000523873 OR6C70A6NIJ9 312 aa11.75□□□□□ -0.53
VEGFA-224ENST00000523873 LRRC3CA6NJW4 275 aa11.75□□□□□ -0.53
VEGFA-224ENST00000523873 NPIPA7E9PJI5 369 aa11.75□□□□□ -0.53
VEGFA-224ENST00000523873 GNB5O14775 395 aa11.75□□□□□ -0.53
VEGFA-224ENST00000523873 TFECO14948 347 aaPredicted RBP11.75□□□□□ -0.53
VEGFA-224ENST00000523873 SCO2O43819 266 aa11.75□□□□□ -0.53
VEGFA-224ENST00000523873 KCNK2O95069 426 aa11.75□□□□□ -0.53
VEGFA-224ENST00000523873 IL33O95760 270 aa11.75□□□□□ -0.53
VEGFA-224ENST00000523873 RFPL3SP0C7P2 107 aa11.75□□□□□ -0.53
VEGFA-224ENST00000523873 NPIPA8P0DM63 369 aa11.75□□□□□ -0.53
VEGFA-224ENST00000523873 ZNF24P17028 368 aa11.75□□□□□ -0.53
VEGFA-224ENST00000523873 LSP1P33241 339 aa11.75□□□□□ -0.53
VEGFA-224ENST00000523873 CHI3L1P36222 383 aaPredicted RBP11.75□□□□□ -0.53
VEGFA-224ENST00000523873 MAN2A2P49641 1150 aa11.75□□□□□ -0.53
VEGFA-224ENST00000523873 PNLIPRP2P54317 469 aa11.75□□□□□ -0.53
VEGFA-224ENST00000523873 KCNK10P57789 538 aa11.75□□□□□ -0.53
VEGFA-224ENST00000523873 HSF1Q00613 529 aa11.75□□□□□ -0.53
VEGFA-224ENST00000523873 FOXO1Q12778 655 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms