RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 DHRS4L1P0CG22 281 aa11.77□□□□□ -0.53
HDAC1-209ENST00000484305 GLI4P10075 376 aa11.77□□□□□ -0.53
HDAC1-209ENST00000484305 PRF1P14222 555 aa11.77□□□□□ -0.53
HDAC1-209ENST00000484305 ELAVL4P26378 380 aaKnown RBP11.77□□□□□ -0.53
HDAC1-209ENST00000484305 IL12BP29460 328 aa11.77□□□□□ -0.53
HDAC1-209ENST00000484305 KRT20P35900 424 aa11.77□□□□□ -0.53
HDAC1-209ENST00000484305 FRKP42685 505 aaPredicted RBP11.77□□□□□ -0.53
HDAC1-209ENST00000484305 KIR3DL1P43629 444 aa11.77□□□□□ -0.53
HDAC1-209ENST00000484305 ASMTP46597 345 aa11.77□□□□□ -0.53
HDAC1-209ENST00000484305 PNLIPRP2P54317 469 aa11.77□□□□□ -0.53
HDAC1-209ENST00000484305 CRYZQ08257 329 aaKnown RBP11.77□□□□□ -0.53
HDAC1-209ENST00000484305 GAB1Q13480 694 aa11.77□□□□□ -0.53
HDAC1-209ENST00000484305 TOMM20Q15388 145 aa11.77□□□□□ -0.53
HDAC1-209ENST00000484305 CHI3L2Q15782 390 aa11.77□□□□□ -0.53
HDAC1-209ENST00000484305 ATP6AP1LQ52LC2 224 aa11.77□□□□□ -0.53
HDAC1-209ENST00000484305 EIPR1Q53HC9 387 aa11.77□□□□□ -0.53
HDAC1-209ENST00000484305 WIPI1Q5MNZ9 446 aaPredicted RBP11.77□□□□□ -0.53
HDAC1-209ENST00000484305 C6orf136Q5SQH8 315 aa11.77□□□□□ -0.53
HDAC1-209ENST00000484305 B3GNT6Q6ZMB0 384 aa11.77□□□□□ -0.53
HDAC1-209ENST00000484305 ACAD11Q709F0 780 aa11.77□□□□□ -0.53
HDAC1-209ENST00000484305 CCDC71Q8IV32 467 aaPredicted RBP11.77□□□□□ -0.53
HDAC1-209ENST00000484305 PGM2Q96G03 612 aa11.77□□□□□ -0.53
HDAC1-209ENST00000484305 TIMP4Q99727 224 aa11.77□□□□□ -0.53
HDAC1-209ENST00000484305 C1orf50Q9BV19 199 aa11.77□□□□□ -0.53
HDAC1-209ENST00000484305 C20orf27Q9GZN8 174 aa11.77□□□□□ -0.53
HDAC1-209ENST00000484305 KCNK9Q9NPC2 374 aa11.77□□□□□ -0.53
HDAC1-209ENST00000484305 MAPRE3Q9UPY8 281 aa11.77□□□□□ -0.53
HDAC1-209ENST00000484305 SLC6A5Q9Y345 797 aa11.77□□□□□ -0.53
HDAC1-209ENST00000484305 KIAA1549Q9HCM3 1950 aa11.76□□□□□ -0.53
HDAC1-209ENST00000484305 TMEM114B3SHH9 223 aa11.76□□□□□ -0.53
HDAC1-209ENST00000484305 SERPINE1P05121 402 aa11.76□□□□□ -0.53
HDAC1-209ENST00000484305 CYP4B1P13584 511 aa11.76□□□□□ -0.53
HDAC1-209ENST00000484305 EFNA1P20827 205 aaPredicted RBP11.76□□□□□ -0.53
HDAC1-209ENST00000484305 MAPK1P28482 360 aa11.76□□□□□ -0.53
HDAC1-209ENST00000484305 MANFP55145 182 aaKnown RBP11.76□□□□□ -0.53
HDAC1-209ENST00000484305 ABCE1P61221 599 aaKnown RBP11.76□□□□□ -0.53
HDAC1-209ENST00000484305 PSPHP78330 225 aa11.76□□□□□ -0.53
HDAC1-209ENST00000484305 EFR3AQ14156 821 aa11.76□□□□□ -0.53
HDAC1-209ENST00000484305 PTGR1Q14914 329 aa11.76□□□□□ -0.53
HDAC1-209ENST00000484305 CYP27C1Q4G0S4 372 aa11.76□□□□□ -0.53
HDAC1-209ENST00000484305 C1orf185Q5T7R7 199 aa11.76□□□□□ -0.53
HDAC1-209ENST00000484305 IL23RQ5VWK5 629 aa11.76□□□□□ -0.53
HDAC1-209ENST00000484305 VASNQ6EMK4 673 aa11.76□□□□□ -0.53
HDAC1-209ENST00000484305 LRIG3Q6UXM1 1119 aa11.76□□□□□ -0.53
HDAC1-209ENST00000484305 YRDCQ86U90 279 aaKnown RBP11.76□□□□□ -0.53
HDAC1-209ENST00000484305 ULK2Q8IYT8 1036 aa11.76□□□□□ -0.53
HDAC1-209ENST00000484305 ZNF781Q8N8C0 355 aa11.76□□□□□ -0.53
HDAC1-209ENST00000484305 FAM83FQ8NEG4 500 aaPredicted RBP11.76□□□□□ -0.53
HDAC1-209ENST00000484305 OR7A2PQ8NGA2 310 aa11.76□□□□□ -0.53
HDAC1-209ENST00000484305 OR10Q1Q8NGQ4 319 aa11.76□□□□□ -0.53
HDAC1-209ENST00000484305 NUDT8Q8WV74 236 aa11.76□□□□□ -0.53
HDAC1-209ENST00000484305 RNF138Q8WVD3 245 aa11.76□□□□□ -0.53
HDAC1-209ENST00000484305 ASB5Q8WWX0 329 aa11.76□□□□□ -0.53
HDAC1-209ENST00000484305 MTERF3Q96E29 417 aa11.76□□□□□ -0.53
HDAC1-209ENST00000484305 ZBED6CLQ96FA7 236 aaPredicted RBP11.76□□□□□ -0.53
HDAC1-209ENST00000484305 LMF2Q9BU23 707 aaKnown RBP11.76□□□□□ -0.53
HDAC1-209ENST00000484305 UCK2Q9BZX2 261 aa11.76□□□□□ -0.53
HDAC1-209ENST00000484305 EQTNQ9NQ60 294 aa11.76□□□□□ -0.53
HDAC1-209ENST00000484305 SERHLQ9NQF3 203 aa11.76□□□□□ -0.53
HDAC1-209ENST00000484305 FLRT3Q9NZU0 649 aa11.76□□□□□ -0.53
HDAC1-209ENST00000484305 CBLCQ9ULV8 474 aa11.76□□□□□ -0.53
HDAC1-209ENST00000484305 PCDHGB3Q9Y5G1 929 aa11.76□□□□□ -0.53
HDAC1-209ENST00000484305 ACTL7BQ9Y614 415 aa11.76□□□□□ -0.53
HDAC1-209ENST00000484305 INTS1Q8N201 2190 aaKnown RBP11.75□□□□□ -0.53
HDAC1-209ENST00000484305 NKX2-6A6NCS4 301 aa11.75□□□□□ -0.53
HDAC1-209ENST00000484305 C17orf51A8MQB3 221 aa11.75□□□□□ -0.53
HDAC1-209ENST00000484305 KDM4EB2RXH2 506 aaPredicted RBP11.75□□□□□ -0.53
HDAC1-209ENST00000484305 B4DXG7 233 aa11.75□□□□□ -0.53
HDAC1-209ENST00000484305 SCAMP2O15127 329 aaKnown RBP11.75□□□□□ -0.53
HDAC1-209ENST00000484305 CBR3O75828 277 aa11.75□□□□□ -0.53
HDAC1-209ENST00000484305 ZWINTO95229 277 aa11.75□□□□□ -0.53
HDAC1-209ENST00000484305 HOXD4P09016 255 aaPredicted RBP11.75□□□□□ -0.53
HDAC1-209ENST00000484305 IFI6P09912 130 aa11.75□□□□□ -0.53
HDAC1-209ENST00000484305 PRPS2P11908 318 aa11.75□□□□□ -0.53
HDAC1-209ENST00000484305 GABRA1P14867 456 aa11.75□□□□□ -0.53
HDAC1-209ENST00000484305 BMP7P18075 431 aa11.75□□□□□ -0.53
HDAC1-209ENST00000484305 BGNP21810 368 aa11.75□□□□□ -0.53
HDAC1-209ENST00000484305 CHRNB4P30926 498 aa11.75□□□□□ -0.53
HDAC1-209ENST00000484305 GPC1P35052 558 aa11.75□□□□□ -0.53
HDAC1-209ENST00000484305 ADH7P40394 386 aa11.75□□□□□ -0.53
HDAC1-209ENST00000484305 GAS1P54826 345 aa11.75□□□□□ -0.53
HDAC1-209ENST00000484305 ZNHIT3Q15649 155 aaPredicted RBP11.75□□□□□ -0.53
HDAC1-209ENST00000484305 DECR1Q16698 335 aa11.75□□□□□ -0.53
HDAC1-209ENST00000484305 DCST1Q5T197 706 aa11.75□□□□□ -0.53
HDAC1-209ENST00000484305 OR5M10Q6IEU7 315 aa11.75□□□□□ -0.53
HDAC1-209ENST00000484305 R3HCC1LQ7Z5L2 792 aaKnown RBP11.75□□□□□ -0.53
HDAC1-209ENST00000484305 CROCCP2Q86T23 111 aa11.75□□□□□ -0.53
HDAC1-209ENST00000484305 MCEMP1Q8IX19 187 aa11.75□□□□□ -0.53
HDAC1-209ENST00000484305 KRTCAP2Q8N6L1 136 aa11.75□□□□□ -0.53
HDAC1-209ENST00000484305 FNDC5Q8NAU1 212 aa11.75□□□□□ -0.53
HDAC1-209ENST00000484305 LILRB4Q8NHJ6 448 aa11.75□□□□□ -0.53
HDAC1-209ENST00000484305 ZFP28Q8NHY6 868 aa11.75□□□□□ -0.53
HDAC1-209ENST00000484305 TUBGCP3Q96CW5 907 aa11.75□□□□□ -0.53
HDAC1-209ENST00000484305 PPP1R36Q96LQ0 422 aa11.75□□□□□ -0.53
HDAC1-209ENST00000484305 SORT1Q99523 831 aa11.75□□□□□ -0.53
HDAC1-209ENST00000484305 Q9N2J8 555 aa11.75□□□□□ -0.53
HDAC1-209ENST00000484305 ACSS1Q9NUB1 689 aaPredicted RBP11.75□□□□□ -0.53
HDAC1-209ENST00000484305 ATP6V1HQ9UI12 483 aa11.75□□□□□ -0.53
HDAC1-209ENST00000484305 FBXL2Q9UKC9 423 aa11.75□□□□□ -0.53
HDAC1-209ENST00000484305 WIF1Q9Y5W5 379 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms