RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 TMEM255AQ5JRV8 349 aa13.03□□□□□ -0.32
HDAC1-206ENST00000476391 FAM74A1Q5RGS3 127 aa13.03□□□□□ -0.32
HDAC1-206ENST00000476391 DCST1Q5T197 706 aa13.03□□□□□ -0.32
HDAC1-206ENST00000476391 ARMC12Q5T9G4 340 aa13.03□□□□□ -0.32
HDAC1-206ENST00000476391 ANXA8L1Q5VT79 327 aa13.03□□□□□ -0.32
HDAC1-206ENST00000476391 NPAS3Q8IXF0 933 aa13.03□□□□□ -0.32
HDAC1-206ENST00000476391 OXR1Q8N573 874 aa13.03□□□□□ -0.32
HDAC1-206ENST00000476391 TTC16Q8NEE8 873 aa13.03□□□□□ -0.32
HDAC1-206ENST00000476391 OR11G2Q8NGC1 345 aa13.03□□□□□ -0.32
HDAC1-206ENST00000476391 SP7Q8TDD2 431 aaPredicted RBP13.03□□□□□ -0.32
HDAC1-206ENST00000476391 TRMT2BQ96GJ1 504 aaKnown RBP13.03□□□□□ -0.32
HDAC1-206ENST00000476391 TEFMQ96QE5 360 aaKnown RBP13.03□□□□□ -0.32
HDAC1-206ENST00000476391 EBPLQ9BY08 206 aa13.03□□□□□ -0.32
HDAC1-206ENST00000476391 SEBOXQ9HB31 216 aaPredicted RBP13.03□□□□□ -0.32
HDAC1-206ENST00000476391 CSNK1G1Q9HCP0 422 aa13.03□□□□□ -0.32
HDAC1-206ENST00000476391 CA10Q9NS85 328 aa13.03□□□□□ -0.32
HDAC1-206ENST00000476391 TMEM248Q9NWD8 314 aa13.03□□□□□ -0.32
HDAC1-206ENST00000476391 TRBC2A0A5B9 178 aa13.03□□□□□ -0.32
HDAC1-206ENST00000476391 LRRN3E7EW58 273 aa13.03□□□□□ -0.32
HDAC1-206ENST00000476391 GPR31O00270 319 aa13.03□□□□□ -0.32
HDAC1-206ENST00000476391 CBSLP0DN79 551 aa13.03□□□□□ -0.32
HDAC1-206ENST00000476391 LPOP22079 712 aaPredicted RBP13.03□□□□□ -0.32
HDAC1-206ENST00000476391 HOXA11P31270 313 aaPredicted RBP13.03□□□□□ -0.32
HDAC1-206ENST00000476391 CBSP35520 551 aa13.03□□□□□ -0.32
HDAC1-206ENST00000476391 MTNR1AP48039 350 aa13.03□□□□□ -0.32
HDAC1-206ENST00000476391 MVDP53602 400 aa13.03□□□□□ -0.32
HDAC1-206ENST00000476391 MLLT1Q03111 559 aaPredicted RBP13.03□□□□□ -0.32
HDAC1-206ENST00000476391 ZNF155Q12901 538 aaPredicted RBP13.03□□□□□ -0.32
HDAC1-206ENST00000476391 MINDY4Q4G0A6 757 aa13.03□□□□□ -0.32
HDAC1-206ENST00000476391 EOGTQ5NDL2 527 aa13.03□□□□□ -0.32
HDAC1-206ENST00000476391 PRAMEF13Q5VWM6 474 aa13.03□□□□□ -0.32
HDAC1-206ENST00000476391 IL20RBQ6UXL0 311 aa13.03□□□□□ -0.32
HDAC1-206ENST00000476391 MEIOBQ8N635 442 aa13.03□□□□□ -0.32
HDAC1-206ENST00000476391 HJURPQ8NCD3 748 aaPredicted RBP13.03□□□□□ -0.32
HDAC1-206ENST00000476391 NFKBIDQ8NI38 313 aa13.03□□□□□ -0.32
HDAC1-206ENST00000476391 RAD51AP1Q96B01 352 aa13.03□□□□□ -0.32
HDAC1-206ENST00000476391 TOX2Q96NM4 488 aa13.03□□□□□ -0.32
HDAC1-206ENST00000476391 CPEB1Q9BZB8 566 aaKnown RBP13.03□□□□□ -0.32
HDAC1-206ENST00000476391 BTBD1Q9H0C5 482 aa13.03□□□□□ -0.32
HDAC1-206ENST00000476391 ENKD1Q9H0I2 346 aa13.03□□□□□ -0.32
HDAC1-206ENST00000476391 LRRN3Q9H3W5 708 aa13.03□□□□□ -0.32
HDAC1-206ENST00000476391 RDH14Q9HBH5 336 aa13.03□□□□□ -0.32
HDAC1-206ENST00000476391 NKIRAS2Q9NYR9 191 aa13.03□□□□□ -0.32
HDAC1-206ENST00000476391 KCNE1BA0A087WTH5 132 aa13.02□□□□□ -0.32
HDAC1-206ENST00000476391 A0A1B0GVC2 190 aa13.02□□□□□ -0.32
HDAC1-206ENST00000476391 A0A1W2PRB8 838 aa13.02□□□□□ -0.32
HDAC1-206ENST00000476391 MYBPHLA2RUH7 354 aa13.02□□□□□ -0.32
HDAC1-206ENST00000476391 A6NIN4 97 aa13.02□□□□□ -0.32
HDAC1-206ENST00000476391 ZNF729A6NN14 1252 aaPredicted RBP13.02□□□□□ -0.32
HDAC1-206ENST00000476391 FFAR1O14842 300 aa13.02□□□□□ -0.32
HDAC1-206ENST00000476391 GSTZ1O43708 216 aaPredicted RBP13.02□□□□□ -0.32
HDAC1-206ENST00000476391 WNT1P04628 370 aa13.02□□□□□ -0.32
HDAC1-206ENST00000476391 ETFAP13804 333 aa13.02□□□□□ -0.32
HDAC1-206ENST00000476391 PSMB1P20618 241 aaKnown RBP13.02□□□□□ -0.32
HDAC1-206ENST00000476391 SLC1A3P43003 542 aa13.02□□□□□ -0.32
HDAC1-206ENST00000476391 PTGFRP43088 359 aa13.02□□□□□ -0.32
HDAC1-206ENST00000476391 DGCR2P98153 550 aa13.02□□□□□ -0.32
HDAC1-206ENST00000476391 ECH1Q13011 328 aa13.02□□□□□ -0.32
HDAC1-206ENST00000476391 IRF5Q13568 498 aa13.02□□□□□ -0.32
HDAC1-206ENST00000476391 INSL4Q14641 139 aa13.02□□□□□ -0.32
HDAC1-206ENST00000476391 TTLL4Q14679 1199 aa13.02□□□□□ -0.32
HDAC1-206ENST00000476391 TRAM2Q15035 370 aa13.02□□□□□ -0.32
HDAC1-206ENST00000476391 ZNF425Q6IV72 752 aa13.02□□□□□ -0.32
HDAC1-206ENST00000476391 KIAA1161Q6NSJ0 714 aa13.02□□□□□ -0.32
HDAC1-206ENST00000476391 GLDNQ6ZMI3 551 aaPredicted RBP13.02□□□□□ -0.32
HDAC1-206ENST00000476391 SLC30A8Q8IWU4 369 aa13.02□□□□□ -0.32
HDAC1-206ENST00000476391 GAL3ST1Q99999 423 aa13.02□□□□□ -0.32
HDAC1-206ENST00000476391 ZYG11BQ9C0D3 744 aa13.02□□□□□ -0.32
HDAC1-206ENST00000476391 PIGMQ9H3S5 423 aa13.02□□□□□ -0.32
HDAC1-206ENST00000476391 SLC32A1Q9H598 525 aa13.02□□□□□ -0.32
HDAC1-206ENST00000476391 ELAC1Q9H777 363 aaKnown RBP13.02□□□□□ -0.32
HDAC1-206ENST00000476391 GOLGA2P5Q9HBQ8 144 aa13.02□□□□□ -0.32
HDAC1-206ENST00000476391 PRDM5Q9NQX1 630 aaPredicted RBP13.02□□□□□ -0.32
HDAC1-206ENST00000476391 ZFP57Q9NU63 452 aa13.02□□□□□ -0.32
HDAC1-206ENST00000476391 GPATCH2Q9NW75 528 aa13.02□□□□□ -0.32
HDAC1-206ENST00000476391 RASL12Q9NYN1 266 aa13.02□□□□□ -0.32
HDAC1-206ENST00000476391 FKBPLQ9UIM3 349 aa13.02□□□□□ -0.32
HDAC1-206ENST00000476391 RASD1Q9Y272 281 aa13.02□□□□□ -0.32
HDAC1-206ENST00000476391 TDRD15B5MCY1 1934 aaKnown RBP13.02□□□□□ -0.33
HDAC1-206ENST00000476391 CCDC88CQ9P219 2028 aa13.02□□□□□ -0.33
HDAC1-206ENST00000476391 MTMR11A4FU01 709 aa13.02□□□□□ -0.33
HDAC1-206ENST00000476391 OR6C68A6NDL8 312 aa13.02□□□□□ -0.33
HDAC1-206ENST00000476391 UBE2CO00762 179 aa13.02□□□□□ -0.33
HDAC1-206ENST00000476391 SCAMP2O15127 329 aaKnown RBP13.02□□□□□ -0.33
HDAC1-206ENST00000476391 GATBO75879 557 aaKnown RBP13.02□□□□□ -0.33
HDAC1-206ENST00000476391 RGS9O75916 674 aaPredicted RBP13.02□□□□□ -0.33
HDAC1-206ENST00000476391 MOCS2O96007 188 aaPredicted RBP13.02□□□□□ -0.33
HDAC1-206ENST00000476391 HEXAP06865 529 aa13.02□□□□□ -0.33
HDAC1-206ENST00000476391 OR12D1P0DN82 309 aa13.02□□□□□ -0.33
HDAC1-206ENST00000476391 KCNE1P15382 129 aa13.02□□□□□ -0.33
HDAC1-206ENST00000476391 EPORP19235 508 aa13.02□□□□□ -0.33
HDAC1-206ENST00000476391 PAICSP22234 425 aaKnown RBP13.02□□□□□ -0.33
HDAC1-206ENST00000476391 DGKAP23743 735 aa13.02□□□□□ -0.33
HDAC1-206ENST00000476391 ELAVL4P26378 380 aaKnown RBP13.02□□□□□ -0.33
HDAC1-206ENST00000476391 ATP5C1P36542 298 aaKnown RBP13.02□□□□□ -0.33
HDAC1-206ENST00000476391 CDK6Q00534 326 aa13.02□□□□□ -0.33
HDAC1-206ENST00000476391 ZNF235Q14590 738 aa13.02□□□□□ -0.33
HDAC1-206ENST00000476391 MBTPS1Q14703 1052 aa13.02□□□□□ -0.33
HDAC1-206ENST00000476391 SF1Q15637 639 aaKnown RBP13.02□□□□□ -0.33
HDAC1-206ENST00000476391 SGCAQ16586 387 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms