RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 CCSMST1Q4G0I0 132 aa4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 SYTL3Q4VX76 610 aa4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 DNAJC21Q5F1R6 531 aaKnown RBP4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 PPP6R3Q5H9R7 873 aaPredicted RBP4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 SPDYAQ5MJ70 313 aa4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 ZNF449Q6P9G9 518 aa4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 SCIMPQ6UWF3 145 aa4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 TMCO3Q6UWJ1 677 aa4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 SYT10Q6XYQ8 523 aa4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 HSDL2Q6YN16 418 aa4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 Q6ZSR9 355 aa4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 LDB1Q86U70 411 aaPredicted RBP4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 YRDCQ86U90 279 aaKnown RBP4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 PSTKQ8IV42 348 aaKnown RBP4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 PALM2Q8IXS6 379 aa4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 PIANPQ8IYJ0 282 aa4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 ZNF321PQ8N8H1 164 aa4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 FAM83FQ8NEG4 500 aaPredicted RBP4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 OR10G3Q8NGC4 313 aa4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 OR56A1Q8NGH5 318 aa4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 OR4F5Q8NH21 305 aa4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 OR8K3Q8NH51 312 aa4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 IL17DQ8TAD2 202 aa4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 SLC30A5Q8TAD4 765 aa4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 NANPQ8TBE9 248 aa4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 LRTOMTQ8WZ04 291 aa4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 FIG4Q92562 907 aa4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 JSRP1Q96MG2 331 aaPredicted RBP4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 MOGAT1Q96PD6 335 aa4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 VPS16Q9H269 839 aa4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 C1RLQ9NZP8 487 aa4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 TESQ9UGI8 421 aaKnown RBP4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 PROCRQ9UNN8 238 aa4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 MYRFQ9Y2G1 1151 aa4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 MED16Q9Y2X0 877 aa4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 DNAH6Q9C0G6 4158 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 KRT87PA6NCN2 255 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 ZNF860A6NHJ4 632 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 PRSS29PA6NIE9 313 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 PRKRAO75569 313 aaKnown RBP4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 GCM2O75603 506 aaPredicted RBP4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 GPANK1O95872 356 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 CYP1A2P05177 515 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 PKMP14618 531 aaKnown RBP4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 ZNF708P17019 499 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 SLC6A2P23975 617 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 CCNCP24863 283 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 PCGF2P35227 344 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 RAG2P55895 527 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 KRTAP10-11P60412 298 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 LMO4P61968 165 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 FOXE3Q13461 319 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 CCNIQ14094 377 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 FGFBP1Q14512 234 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 CARTPTQ16568 116 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 RBMS3Q6XE24 437 aaKnown RBP4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 MICALCLQ6ZW33 695 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 PLD3Q8IV08 490 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 VRK3Q8IV63 474 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 FBXL14Q8N1E6 418 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 KRT78Q8N1N4 520 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 FAM156AQ8NDB6 213 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 STEAP2Q8NFT2 490 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 MAGEC3Q8TD91 643 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 MCOLN3Q8TDD5 553 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 SLC25A43Q8WUT9 341 aaPredicted RBP4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 HEXDCQ8WVB3 486 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 ATL1Q8WXF7 558 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 RERGQ96A58 199 aaPredicted RBP4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 MTBPQ96DY7 904 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 SPACA9Q96E40 222 aaPredicted RBP4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 DCUN1D1Q96GG9 259 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 APIPQ96GX9 242 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 RADILQ96JH8 1075 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 FAM81BQ96LP2 452 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 COPS8Q99627 209 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 CCDC77Q9BR77 488 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 CRACR2AQ9BSW2 395 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 DOHHQ9BU89 302 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 C1orf43Q9BWL3 253 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 FSD1LQ9BXM9 530 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 LPAR2Q9HBW0 351 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 SIX2Q9NPC8 291 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 NGBQ9NPG2 151 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 AKIP1Q9NQ31 210 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 NPAP1Q9NZP6 1156 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 MYO1AQ9UBC5 1043 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 KCNE5Q9UJ90 142 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 PTBP2Q9UKA9 531 aaKnown RBP4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 NAALAD2Q9Y3Q0 740 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 TTLL3Q9Y4R7 772 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 NOX1Q9Y5S8 564 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 SLC22A7Q9Y694 548 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 PRSS21Q9Y6M0 314 aa4.54□□□□□ -1.68
SBDSP1-204ENST00000453858 ARHGAP32A7KAX9 2087 aa4.53□□□□□ -1.68
SBDSP1-204ENST00000453858 TRBV5-4A0A0C4DH59 114 aa4.53□□□□□ -1.68
SBDSP1-204ENST00000453858 SLC22A20A6NK97 555 aa4.53□□□□□ -1.68
SBDSP1-204ENST00000453858 ABCD4O14678 606 aa4.53□□□□□ -1.68
SBDSP1-204ENST00000453858 HAT1O14929 419 aa4.53□□□□□ -1.68
SBDSP1-204ENST00000453858 REM1O75628 298 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms