RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 GPRIN3Q6ZVF9 776 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 SATL1Q86VE3 508 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 CYP4Z1Q86W10 505 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 PLCZ1Q86YW0 608 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 CPSF7Q8N684 471 aaKnown RBP4.47□□□□□ -1.69
GABPB1-204ENST00000396464 KLHDC1Q8N7A1 406 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 ZNF781Q8N8C0 355 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 TEX45Q8NA69 505 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 STXBP6Q8NFX7 210 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 OR7G2Q8NG99 324 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 OR4D6Q8NGJ1 314 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 OR9G4Q8NGQ1 327 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 OR5R1Q8NH85 324 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 SPATA22Q8NHS9 363 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 KIFAP3Q92845 792 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 ZNF333Q96JL9 665 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 FAM84BQ96KN1 310 aaPredicted RBP4.47□□□□□ -1.69
GABPB1-204ENST00000396464 MAP3K3Q99759 626 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 SHCBP1LQ9BZQ2 653 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 ARRDC1-AS1Q9H2J1 176 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 RANBP3Q9H6Z4 567 aaPredicted RBP4.47□□□□□ -1.69
GABPB1-204ENST00000396464 ZNF665Q9H7R5 613 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 RNF121Q9H920 327 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 CCNB1IP1Q9NPC3 277 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 MYOZ2Q9NPC6 264 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 SPAG4Q9NPE6 437 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 SEMA4GQ9NTN9 838 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 CLEC5AQ9NY25 188 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 TECRQ9NZ01 308 aaKnown RBP4.47□□□□□ -1.69
GABPB1-204ENST00000396464 ADA2Q9NZK5 511 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 PHF11Q9UIL8 331 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 SIX4Q9UIU6 781 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 ZNF229Q9UJW7 825 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 POFUT2Q9Y2G5 429 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 ZNF175Q9Y473 711 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 PCDHGB1Q9Y5G3 927 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 MROH7-TTC4A0A0A0MT08 1334 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 C1orf232A0A0U1RR37 186 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 A0A1W2PRB8 838 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 RAB19A4D1S5 217 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 FRG2CA6NGY1 282 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 YJEFN3A6XGL0 299 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 TULP2O00295 520 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 GAPDHSO14556 408 aaPredicted RBP4.46□□□□□ -1.69
GABPB1-204ENST00000396464 MPPED1O15442 326 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 SCN2BO60939 215 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 OR2J3O76001 311 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 PDE5AO76074 875 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 STK17BO94768 372 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 MT-ND2P03891 347 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 GAPDHP04406 335 aaKnown RBP4.46□□□□□ -1.69
GABPB1-204ENST00000396464 SERPINE2P07093 398 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 ELFN1P0C7U0 828 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 UQCRBP14927 111 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 MAT2AP31153 395 aaKnown RBP4.46□□□□□ -1.69
GABPB1-204ENST00000396464 SFTPDP35247 375 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 UGT1A5P35504 534 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 MAP2K2P36507 400 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 AVPR1AP37288 418 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 KCNJ3P48549 501 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 FHITP49789 147 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 SLC7A2P52569 658 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 ACLYP53396 1101 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 CLDN17P56750 224 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 KRTAP10-11P60412 298 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 DSTNP60981 165 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 CSNK1G2P78368 415 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 CX3CL1P78423 397 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 EWSR1Q01844 656 aaKnown RBP eCLIP4.46□□□□□ -1.69
GABPB1-204ENST00000396464 ART3Q13508 389 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 GPR50Q13585 617 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 ZNF169Q14929 603 aaPredicted RBP4.46□□□□□ -1.69
GABPB1-204ENST00000396464 FASTKD3Q14CZ7 662 aaKnown RBP4.46□□□□□ -1.69
GABPB1-204ENST00000396464 OR1C1Q15619 314 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 PHKG1Q16816 387 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 KNOP1Q1ED39 458 aaKnown RBP4.46□□□□□ -1.69
GABPB1-204ENST00000396464 ZNF699Q32M78 642 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 LGSNQ5TDP6 509 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 FAM69BQ5VUD6 431 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 ZNF776Q68DI1 518 aaPredicted RBP4.46□□□□□ -1.69
GABPB1-204ENST00000396464 OR52W1Q6IF63 320 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 CWC27Q6UX04 472 aaKnown RBP4.46□□□□□ -1.69
GABPB1-204ENST00000396464 C17orf107Q6ZR85 190 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 ACOT1Q86TX2 421 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 KCNMB4Q86W47 210 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 GPBP1Q86WP2 473 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 ZC3H3Q8IXZ2 948 aaKnown RBP4.46□□□□□ -1.69
GABPB1-204ENST00000396464 LRRC34Q8IZ02 419 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 CLEC4FQ8N1N0 589 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 PARP8Q8N3A8 854 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 PRSS35Q8N3Z0 413 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 LRTM2Q8N967 370 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 POC1AQ8NBT0 407 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 CCDC197Q8NCU1 140 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 OR1L6Q8NGR2 347 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 OR1F12Q8NHA8 337 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 THAP6Q8TBB0 222 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 ZNF274Q96GC6 653 aaPredicted RBP4.46□□□□□ -1.69
GABPB1-204ENST00000396464 SLC38A2Q96QD8 506 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 IL4I1Q96RQ9 567 aa4.46□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms