RNA–Protein interactions for RNA: ENST00000357179.9

TOP3B-201, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 2,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-201ENST00000357179 PUM1Q14671 1186 aaKnown RBP eCLIP13.81□□□□□ -0.23e-6■□□□□ 9.7
TOP3B-201ENST00000357179 TCTE1Q5JU00 501 aa13.81□□□□□ -0.2
TOP3B-201ENST00000357179 TMEM173Q86WV6 379 aaPredicted RBP13.81□□□□□ -0.2
TOP3B-201ENST00000357179 OXR1Q8N573 874 aa13.81□□□□□ -0.2
TOP3B-201ENST00000357179 VOPP1Q96AW1 172 aa13.81□□□□□ -0.2
TOP3B-201ENST00000357179 DDOQ99489 341 aa13.81□□□□□ -0.2
TOP3B-201ENST00000357179 TMED9Q9BVK6 235 aa13.81□□□□□ -0.2
TOP3B-201ENST00000357179 TTYH1Q9H313 450 aaPredicted RBP13.81□□□□□ -0.2
TOP3B-201ENST00000357179 SGK2Q9HBY8 427 aa13.81□□□□□ -0.2
TOP3B-201ENST00000357179 IRGMA1A4Y4 181 aa13.81□□□□□ -0.2
TOP3B-201ENST00000357179 EIF4EP06730 217 aaKnown RBP13.81□□□□□ -0.2
TOP3B-201ENST00000357179 CXCL2P19875 107 aa13.81□□□□□ -0.2
TOP3B-201ENST00000357179 RECQLP46063 649 aaPredicted RBP13.81□□□□□ -0.2
TOP3B-201ENST00000357179 SNRPD1P62314 119 aaKnown RBP13.81□□□□□ -0.2
TOP3B-201ENST00000357179 TAP2Q03519 686 aa13.81□□□□□ -0.2
TOP3B-201ENST00000357179 INSL4Q14641 139 aa13.81□□□□□ -0.2
TOP3B-201ENST00000357179 TAF12Q16514 161 aa13.81□□□□□ -0.2
TOP3B-201ENST00000357179 ZNF630Q2M218 657 aaPredicted RBP13.81□□□□□ -0.2
TOP3B-201ENST00000357179 B3GLCTQ6Y288 498 aa13.81□□□□□ -0.2
TOP3B-201ENST00000357179 BCL7CQ8WUZ0 217 aaPredicted RBP13.81□□□□□ -0.2
TOP3B-201ENST00000357179 ASZ1Q8WWH4 475 aa13.81□□□□□ -0.2
TOP3B-201ENST00000357179 TBC1D17Q9HA65 648 aa13.81□□□□□ -0.2
TOP3B-201ENST00000357179 HCSTQ9UBK5 93 aa13.81□□□□□ -0.2
TOP3B-201ENST00000357179 MBD1Q9UIS9 605 aaPredicted RBP13.81□□□□□ -0.2
TOP3B-201ENST00000357179 FBXL2Q9UKC9 423 aa13.81□□□□□ -0.2
TOP3B-201ENST00000357179 TMEM5Q9Y2B1 443 aa13.81□□□□□ -0.2
TOP3B-201ENST00000357179 EXOSC1Q9Y3B2 195 aaKnown RBP13.81□□□□□ -0.2
TOP3B-201ENST00000357179 PLSCR5A0PG75 271 aa13.8□□□□□ -0.2
TOP3B-201ENST00000357179 OR6C65A6NJZ3 312 aa13.8□□□□□ -0.2
TOP3B-201ENST00000357179 MPTX1A8MV57 137 aa13.8□□□□□ -0.2
TOP3B-201ENST00000357179 SLCO2B1O94956 709 aa13.8□□□□□ -0.2
TOP3B-201ENST00000357179 ETHE1O95571 254 aa13.8□□□□□ -0.2
TOP3B-201ENST00000357179 POU3F2P20265 443 aaPredicted RBP13.8□□□□□ -0.2
TOP3B-201ENST00000357179 CALCRP30988 508 aa13.8□□□□□ -0.2
TOP3B-201ENST00000357179 RAB8AP61006 207 aa13.8□□□□□ -0.2
TOP3B-201ENST00000357179 EFNB1P98172 346 aa13.8□□□□□ -0.2
TOP3B-201ENST00000357179 SF1Q15637 639 aaKnown RBP13.8□□□□□ -0.2
TOP3B-201ENST00000357179 PABPC1L2AQ5JQF8 200 aa13.8□□□□□ -0.2
TOP3B-201ENST00000357179 DCST1Q5T197 706 aa13.8□□□□□ -0.2
TOP3B-201ENST00000357179 IDNKQ5T6J7 187 aa13.8□□□□□ -0.2
TOP3B-201ENST00000357179 PGBD2Q6P3X8 592 aa13.8□□□□□ -0.2
TOP3B-201ENST00000357179 TRIM40Q6P9F5 258 aa13.8□□□□□ -0.2
TOP3B-201ENST00000357179 BTN2A1Q7KYR7 527 aa13.8□□□□□ -0.2
TOP3B-201ENST00000357179 NR2C2APQ86WQ0 139 aa13.8□□□□□ -0.2
TOP3B-201ENST00000357179 SLC30A8Q8IWU4 369 aa13.8□□□□□ -0.2
TOP3B-201ENST00000357179 APOBEC4Q8WW27 367 aaKnown RBP13.8□□□□□ -0.2
TOP3B-201ENST00000357179 ABHD1Q96SE0 405 aa13.8□□□□□ -0.2
TOP3B-201ENST00000357179 REEP4Q9H6H4 257 aa13.8□□□□□ -0.2
TOP3B-201ENST00000357179 BRD9Q9H8M2 597 aa13.8□□□□□ -0.2
TOP3B-201ENST00000357179 COA4Q9NYJ1 87 aa13.8□□□□□ -0.2
TOP3B-201ENST00000357179 C2orf92A0A1B0GVN3 265 aa13.8□□□□□ -0.2
TOP3B-201ENST00000357179 FAM25EA8MYX2 175 aa13.8□□□□□ -0.2
TOP3B-201ENST00000357179 FAAHO00519 579 aa13.8□□□□□ -0.2
TOP3B-201ENST00000357179 OR12D1P0DN82 309 aa13.8□□□□□ -0.2
TOP3B-201ENST00000357179 RPL3P39023 403 aaKnown RBP13.8□□□□□ -0.2
TOP3B-201ENST00000357179 OPRD1P41143 372 aa13.8□□□□□ -0.2
TOP3B-201ENST00000357179 SPINT3P49223 89 aa13.8□□□□□ -0.2
TOP3B-201ENST00000357179 AKR1D1P51857 326 aa13.8□□□□□ -0.2
TOP3B-201ENST00000357179 GRIN2CQ14957 1233 aa13.8□□□□□ -0.2
TOP3B-201ENST00000357179 RNFT2Q96EX2 444 aa13.8□□□□□ -0.2
TOP3B-201ENST00000357179 C12orf66Q96MD2 445 aa13.8□□□□□ -0.2
TOP3B-201ENST00000357179 SLC35A5Q9BS91 424 aa13.8□□□□□ -0.2
TOP3B-201ENST00000357179 KIAA1671Q9BY89 1806 aa13.8□□□□□ -0.2
TOP3B-201ENST00000357179 SUV39H2Q9H5I1 410 aa13.8□□□□□ -0.2
TOP3B-201ENST00000357179 SLAMF7Q9NQ25 335 aa13.8□□□□□ -0.2
TOP3B-201ENST00000357179 EMC3Q9P0I2 261 aa13.8□□□□□ -0.2
TOP3B-201ENST00000357179 CLCA2Q9UQC9 943 aa13.8□□□□□ -0.2
TOP3B-201ENST00000357179 ZNF593O00488 134 aaPredicted RBP13.79□□□□□ -0.2
TOP3B-201ENST00000357179 HOXA2O43364 376 aa13.79□□□□□ -0.2
TOP3B-201ENST00000357179 SIGLEC6O43699 453 aa13.79□□□□□ -0.2
TOP3B-201ENST00000357179 SLC28A2O43868 658 aa13.79□□□□□ -0.2
TOP3B-201ENST00000357179 EFEMP2O95967 443 aa13.79□□□□□ -0.2
TOP3B-201ENST00000357179 HPXP02790 462 aa13.79□□□□□ -0.2
TOP3B-201ENST00000357179 ACSL1P33121 698 aa13.79□□□□□ -0.2
TOP3B-201ENST00000357179 KIAA1024LP59773 190 aa13.79□□□□□ -0.2
TOP3B-201ENST00000357179 HBA1P69905 142 aa13.79□□□□□ -0.2
TOP3B-201ENST00000357179 ZNF385BQ569K4 471 aa13.79□□□□□ -0.2
TOP3B-201ENST00000357179 AGTRAPQ6RW13 159 aa13.79□□□□□ -0.2
TOP3B-201ENST00000357179 ELMOD3Q96FG2 381 aa13.79□□□□□ -0.2
TOP3B-201ENST00000357179 SEC22CQ9BRL7 303 aa13.79□□□□□ -0.2
TOP3B-201ENST00000357179 KCNK7Q9Y2U2 307 aa13.79□□□□□ -0.2
TOP3B-201ENST00000357179 SOX30O94993 753 aa13.79□□□□□ -0.2
TOP3B-201ENST00000357179 CBX7O95931 251 aa13.79□□□□□ -0.2
TOP3B-201ENST00000357179 RPL17P18621 184 aaKnown RBP13.79□□□□□ -0.2
TOP3B-201ENST00000357179 NPR2P20594 1047 aa13.79□□□□□ -0.2
TOP3B-201ENST00000357179 CCND3P30281 292 aaPredicted RBP13.79□□□□□ -0.2
TOP3B-201ENST00000357179 CCR6P51684 374 aa13.79□□□□□ -0.2
TOP3B-201ENST00000357179 RPS7P62081 194 aaKnown RBP13.79□□□□□ -0.2
TOP3B-201ENST00000357179 C6orf132Q5T0Z8 1188 aa13.79□□□□□ -0.2
TOP3B-201ENST00000357179 MPP7Q5T2T1 576 aa13.79□□□□□ -0.2
TOP3B-201ENST00000357179 HBMQ6B0K9 141 aa13.79□□□□□ -0.2
TOP3B-201ENST00000357179 PYHIN1Q6K0P9 492 aa13.79□□□□□ -0.2
TOP3B-201ENST00000357179 SERPINA13PQ6UXR4 307 aa13.79□□□□□ -0.2
TOP3B-201ENST00000357179 RFLNAQ6ZTI6 216 aa13.79□□□□□ -0.2
TOP3B-201ENST00000357179 NPAS4Q8IUM7 802 aa13.79□□□□□ -0.2
TOP3B-201ENST00000357179 CMIPQ8IY22 773 aa13.79□□□□□ -0.2
TOP3B-201ENST00000357179 TOMM5Q8N4H5 51 aa13.79□□□□□ -0.2
TOP3B-201ENST00000357179 ZNF527Q8NB42 609 aa13.79□□□□□ -0.2
TOP3B-201ENST00000357179 OR56B4Q8NH76 319 aa13.79□□□□□ -0.2
TOP3B-201ENST00000357179 COQ8AQ8NI60 647 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms