RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 ARNTLO00327 626 aa16.3■□□□□ 0.2
CDCP1-201ENST00000296129 APOC1P02654 83 aa16.3■□□□□ 0.2
CDCP1-201ENST00000296129 F11P03951 625 aa16.3■□□□□ 0.2
CDCP1-201ENST00000296129 GABRB3P28472 473 aa16.3■□□□□ 0.2
CDCP1-201ENST00000296129 GALK2Q01415 458 aa16.3■□□□□ 0.2
CDCP1-201ENST00000296129 CASTOR1Q8WTX7 329 aa16.3■□□□□ 0.2
CDCP1-201ENST00000296129 CDS1Q92903 461 aa16.3■□□□□ 0.2
CDCP1-201ENST00000296129 PGAM5Q96HS1 289 aa16.3■□□□□ 0.2
CDCP1-201ENST00000296129 PCDHB16Q9NRJ7 776 aa16.3■□□□□ 0.2
CDCP1-201ENST00000296129 SEC14L5O43304 696 aa16.29■□□□□ 0.2
CDCP1-201ENST00000296129 GTF2F2P13984 249 aa16.29■□□□□ 0.2
CDCP1-201ENST00000296129 MAN2A2P49641 1150 aa16.29■□□□□ 0.2
CDCP1-201ENST00000296129 AKR1D1P51857 326 aa16.29■□□□□ 0.2
CDCP1-201ENST00000296129 CBFBQ13951 182 aa16.29■□□□□ 0.2
CDCP1-201ENST00000296129 MFSD6LQ8IWD5 586 aa16.29■□□□□ 0.2
CDCP1-201ENST00000296129 ADGRG5Q8IZF4 528 aa16.29■□□□□ 0.2
CDCP1-201ENST00000296129 PITHD1Q9GZP4 211 aaPredicted RBP16.29■□□□□ 0.2
CDCP1-201ENST00000296129 RIMS3Q9UJD0 308 aa16.29■□□□□ 0.2
CDCP1-201ENST00000296129 CLCA1A8K7I4 914 aa16.29■□□□□ 0.2
CDCP1-201ENST00000296129 E2F3O00716 465 aa16.29■□□□□ 0.2
CDCP1-201ENST00000296129 PABPC4LP0CB38 370 aaKnown RBP16.29■□□□□ 0.2
CDCP1-201ENST00000296129 NLGN4XQ8N0W4 816 aa16.29■□□□□ 0.2
CDCP1-201ENST00000296129 LINC01465Q8N7H1 131 aa16.29■□□□□ 0.2
CDCP1-201ENST00000296129 LMNTD1Q8N9Z9 388 aa16.29■□□□□ 0.2
CDCP1-201ENST00000296129 ELP5Q8TE02 316 aa16.29■□□□□ 0.2
CDCP1-201ENST00000296129 COL18A1P39060 1754 aa16.29■□□□□ 0.2
CDCP1-201ENST00000296129 IFNA7P01567 189 aa16.29■□□□□ 0.2
CDCP1-201ENST00000296129 S100A6P06703 90 aa16.29■□□□□ 0.2
CDCP1-201ENST00000296129 CTXN1P60606 82 aa16.29■□□□□ 0.2
CDCP1-201ENST00000296129 Q8N402 240 aa16.29■□□□□ 0.2
CDCP1-201ENST00000296129 MAGEA8P43361 318 aa16.29■□□□□ 0.2
CDCP1-201ENST00000296129 NCS1P62166 190 aa16.29■□□□□ 0.2
CDCP1-201ENST00000296129 RPS15P62841 145 aaKnown RBP16.29■□□□□ 0.2
CDCP1-201ENST00000296129 TMEM173Q86WV6 379 aaPredicted RBP16.29■□□□□ 0.2
CDCP1-201ENST00000296129 FAM217AQ8IXS0 508 aa16.29■□□□□ 0.2
CDCP1-201ENST00000296129 ZNF300Q96RE9 604 aaPredicted RBP16.29■□□□□ 0.2
CDCP1-201ENST00000296129 LPAR4Q99677 370 aa16.29■□□□□ 0.2
CDCP1-201ENST00000296129 TIMM29Q9BSF4 260 aa16.29■□□□□ 0.2
CDCP1-201ENST00000296129 ANTXRLA6NF34 631 aa16.29■□□□□ 0.2
CDCP1-201ENST00000296129 POLR1CO15160 346 aaPredicted RBP16.29■□□□□ 0.2
CDCP1-201ENST00000296129 HBQ1P09105 142 aa16.29■□□□□ 0.2
CDCP1-201ENST00000296129 GKN3PP0CG01 181 aa16.29■□□□□ 0.2
CDCP1-201ENST00000296129 FRKP42685 505 aaPredicted RBP16.29■□□□□ 0.2
CDCP1-201ENST00000296129 HERV-K104P61576 105 aa16.29■□□□□ 0.2
CDCP1-201ENST00000296129 CTBSQ01459 385 aa16.29■□□□□ 0.2
CDCP1-201ENST00000296129 SERTAD2Q14140 314 aa16.29■□□□□ 0.2
CDCP1-201ENST00000296129 LPAL2Q16609 132 aa16.29■□□□□ 0.2
CDCP1-201ENST00000296129 ZBP1Q9H171 429 aa16.29■□□□□ 0.2
CDCP1-201ENST00000296129 SLC9B1P1A6NJY1 282 aa16.28■□□□□ 0.2
CDCP1-201ENST00000296129 MAS1P04201 325 aa16.28■□□□□ 0.2
CDCP1-201ENST00000296129 HMGN2P05204 90 aaKnown RBP16.28■□□□□ 0.2
CDCP1-201ENST00000296129 DLX2Q07687 328 aaPredicted RBP16.28■□□□□ 0.2
CDCP1-201ENST00000296129 RFLNAQ6ZTI6 216 aa16.28■□□□□ 0.2
CDCP1-201ENST00000296129 GAREM2Q75VX8 874 aa16.28■□□□□ 0.2
CDCP1-201ENST00000296129 WDR53Q7Z5U6 358 aaPredicted RBP16.28■□□□□ 0.2
CDCP1-201ENST00000296129 TMEM151AQ8N4L1 468 aa16.28■□□□□ 0.2
CDCP1-201ENST00000296129 NT5C3BQ969T7 300 aa16.28■□□□□ 0.2
CDCP1-201ENST00000296129 GLI3P10071 1580 aa16.28■□□□□ 0.2
CDCP1-201ENST00000296129 INMT-MINDY4F8WBC2 141 aa16.28■□□□□ 0.2
CDCP1-201ENST00000296129 VWA5B2Q8N398 1253 aa16.28■□□□□ 0.2
CDCP1-201ENST00000296129 ASB15Q8WXK1 588 aa16.28■□□□□ 0.2
CDCP1-201ENST00000296129 BMFQ96LC9 184 aa16.28■□□□□ 0.2
CDCP1-201ENST00000296129 SAGE1Q9NXZ1 904 aa16.28■□□□□ 0.2
CDCP1-201ENST00000296129 HS3ST2Q9Y278 367 aa16.28■□□□□ 0.2
CDCP1-201ENST00000296129 ZNF16P17020 682 aaPredicted RBP16.28■□□□□ 0.2
CDCP1-201ENST00000296129 MAGEA3P43357 314 aa16.28■□□□□ 0.2
CDCP1-201ENST00000296129 MEX3DQ86XN8 651 aaKnown RBP16.28■□□□□ 0.2
CDCP1-201ENST00000296129 KIR2DS5A0A0G2JLQ3 304 aa16.28■□□□□ 0.2
CDCP1-201ENST00000296129 A0A0G2JNG1 304 aa16.28■□□□□ 0.2
CDCP1-201ENST00000296129 KIR2DS3K7RE56 304 aa16.28■□□□□ 0.2
CDCP1-201ENST00000296129 HSPA12AO43301 675 aa16.28■□□□□ 0.2
CDCP1-201ENST00000296129 P04436 131 aa16.28■□□□□ 0.2
CDCP1-201ENST00000296129 MAOBP27338 520 aa16.28■□□□□ 0.2
CDCP1-201ENST00000296129 ELOAQ14241 798 aaKnown RBP16.28■□□□□ 0.2
CDCP1-201ENST00000296129 KIR2DS5Q14953 304 aa16.28■□□□□ 0.2
CDCP1-201ENST00000296129 CHRDL2Q6WN34 429 aa16.28■□□□□ 0.2
CDCP1-201ENST00000296129 RBM12BQ8IXT5 1001 aaKnown RBP16.28■□□□□ 0.2
CDCP1-201ENST00000296129 ANKK1Q8NFD2 765 aa16.28■□□□□ 0.2
CDCP1-201ENST00000296129 FKBP10Q96AY3 582 aa16.28■□□□□ 0.2
CDCP1-201ENST00000296129 UHRF1Q96T88 793 aaPredicted RBP16.28■□□□□ 0.2
CDCP1-201ENST00000296129 AGPAT4Q9NRZ5 378 aa16.28■□□□□ 0.2
CDCP1-201ENST00000296129 DKK3Q9UBP4 350 aa16.28■□□□□ 0.2
CDCP1-201ENST00000296129 TNRC6CQ9HCJ0 1690 aaKnown RBP16.28■□□□□ 0.2
CDCP1-201ENST00000296129 VSTM5A8MXK1 200 aa16.28■□□□□ 0.2
CDCP1-201ENST00000296129 PCDH17O14917 1159 aa16.28■□□□□ 0.2
CDCP1-201ENST00000296129 PVRP15151 417 aa16.28■□□□□ 0.2
CDCP1-201ENST00000296129 CDK5R2Q13319 367 aa16.28■□□□□ 0.2
CDCP1-201ENST00000296129 DCST2Q5T1A1 773 aa16.28■□□□□ 0.2
CDCP1-201ENST00000296129 LRRN1Q6UXK5 716 aa16.28■□□□□ 0.2
CDCP1-201ENST00000296129 ZSCAN4Q8NAM6 433 aaPredicted RBP16.28■□□□□ 0.2
CDCP1-201ENST00000296129 TANKQ92844 425 aa16.28■□□□□ 0.2
CDCP1-201ENST00000296129 EGLN2Q96KS0 407 aa16.28■□□□□ 0.2
CDCP1-201ENST00000296129 FBXL3Q9UKT7 428 aa16.28■□□□□ 0.2
CDCP1-201ENST00000296129 TEX13CA0A0J9YWL9 993 aa16.27■□□□□ 0.2
CDCP1-201ENST00000296129 KLKB1P03952 638 aa16.27■□□□□ 0.2
CDCP1-201ENST00000296129 OR2T4Q8NH00 348 aa16.27■□□□□ 0.2
CDCP1-201ENST00000296129 ZFAND2BQ8WV99 257 aa16.27■□□□□ 0.2
CDCP1-201ENST00000296129 BIRC8Q96P09 236 aa16.27■□□□□ 0.2
CDCP1-201ENST00000296129 COL22A1Q8NFW1 1626 aaPredicted RBP16.27■□□□□ 0.2
CDCP1-201ENST00000296129 KEAP1Q14145 624 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms