RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 B4GALT3O60512 393 aa15.79■□□□□ 0.12
PHRF1-201ENST00000264555 CD8BP10966 210 aa15.79■□□□□ 0.12
PHRF1-201ENST00000264555 SLC6A9P48067 706 aa15.79■□□□□ 0.12
PHRF1-201ENST00000264555 SGCBQ16585 318 aa15.79■□□□□ 0.12
PHRF1-201ENST00000264555 VWA5B2Q8N398 1253 aa15.79■□□□□ 0.12
PHRF1-201ENST00000264555 OR52E2Q8NGJ4 325 aa15.79■□□□□ 0.12
PHRF1-201ENST00000264555 HDHD5Q9BXW7 423 aa15.79■□□□□ 0.12
PHRF1-201ENST00000264555 OBP2AQ9NY56 170 aa15.79■□□□□ 0.12
PHRF1-201ENST00000264555 F3P13726 295 aa15.78■□□□□ 0.12
PHRF1-201ENST00000264555 Q8N402 240 aa15.78■□□□□ 0.12
PHRF1-201ENST00000264555 CREB3L4Q8TEY5 395 aa15.78■□□□□ 0.12
PHRF1-201ENST00000264555 PNPLA2Q96AD5 504 aa15.78■□□□□ 0.12
PHRF1-201ENST00000264555 CYB5AP00167 134 aa15.78■□□□□ 0.12
PHRF1-201ENST00000264555 CSF2P04141 144 aa15.78■□□□□ 0.12
PHRF1-201ENST00000264555 C4orf46Q504U0 113 aa15.78■□□□□ 0.12
PHRF1-201ENST00000264555 ZFP41Q8N8Y5 198 aa15.78■□□□□ 0.12
PHRF1-201ENST00000264555 MFSD9Q8NBP5 474 aa15.78■□□□□ 0.12
PHRF1-201ENST00000264555 CHTF18Q8WVB6 975 aa15.78■□□□□ 0.12
PHRF1-201ENST00000264555 RXFP3Q9NSD7 469 aa15.78■□□□□ 0.12
PHRF1-201ENST00000264555 TAS2R10Q9NYW0 307 aa15.78■□□□□ 0.12
PHRF1-201ENST00000264555 ACPPP15309 386 aa15.78■□□□□ 0.12
PHRF1-201ENST00000264555 MAGEA8P43361 318 aa15.78■□□□□ 0.12
PHRF1-201ENST00000264555 OR3A3P47888 321 aa15.78■□□□□ 0.12
PHRF1-201ENST00000264555 OR3A2P47893 321 aa15.78■□□□□ 0.12
PHRF1-201ENST00000264555 DLEU7Q6UYE1 221 aa15.78■□□□□ 0.12
PHRF1-201ENST00000264555 USP53Q70EK8 1073 aa15.78■□□□□ 0.12
PHRF1-201ENST00000264555 GALNTL5Q7Z4T8 443 aa15.78■□□□□ 0.12
PHRF1-201ENST00000264555 CCDC36Q8IYA8 594 aa15.78■□□□□ 0.12
PHRF1-201ENST00000264555 DNAJA4Q8WW22 397 aaPredicted RBP15.78■□□□□ 0.12
PHRF1-201ENST00000264555 OLAHQ9NV23 265 aa15.78■□□□□ 0.12
PHRF1-201ENST00000264555 PCDH17O14917 1159 aa15.78■□□□□ 0.12
PHRF1-201ENST00000264555 ATP6V1G1O75348 118 aa15.78■□□□□ 0.12
PHRF1-201ENST00000264555 PEX11BO96011 259 aa15.78■□□□□ 0.12
PHRF1-201ENST00000264555 NPPBP16860 134 aa15.78■□□□□ 0.12
PHRF1-201ENST00000264555 MRPS21P82921 87 aaKnown RBP15.78■□□□□ 0.12
PHRF1-201ENST00000264555 SNTA1Q13424 505 aa15.78■□□□□ 0.12
PHRF1-201ENST00000264555 VN1R2Q8NFZ6 395 aa15.78■□□□□ 0.12
PHRF1-201ENST00000264555 OR6N1Q8NGY5 312 aa15.78■□□□□ 0.12
PHRF1-201ENST00000264555 C19orf43Q9BQ61 176 aa15.78■□□□□ 0.12
PHRF1-201ENST00000264555 PLCL2Q9UPR0 1127 aa15.78■□□□□ 0.12
PHRF1-201ENST00000264555 TRBV2A0A0J9YWF9 115 aa15.78■□□□□ 0.12
PHRF1-201ENST00000264555 TP53I11O14683 189 aa15.78■□□□□ 0.12
PHRF1-201ENST00000264555 FRS3O43559 492 aa15.78■□□□□ 0.12
PHRF1-201ENST00000264555 SPARCP09486 303 aa15.78■□□□□ 0.12
PHRF1-201ENST00000264555 STOMP27105 288 aa15.78■□□□□ 0.12
PHRF1-201ENST00000264555 CD40LGP29965 261 aa15.78■□□□□ 0.12
PHRF1-201ENST00000264555 ACVR1BP36896 505 aa15.78■□□□□ 0.12
PHRF1-201ENST00000264555 CBX5P45973 191 aa15.78■□□□□ 0.12
PHRF1-201ENST00000264555 DUSP3P51452 185 aaPredicted RBP15.78■□□□□ 0.12
PHRF1-201ENST00000264555 MAP4K2Q12851 820 aa15.78■□□□□ 0.12
PHRF1-201ENST00000264555 SYPL1Q16563 259 aa15.78■□□□□ 0.12
PHRF1-201ENST00000264555 BHLHA9Q7RTU4 235 aa15.78■□□□□ 0.12
PHRF1-201ENST00000264555 OR7D2Q96RA2 312 aa15.78■□□□□ 0.12
PHRF1-201ENST00000264555 DPH1Q9BZG8 443 aa15.78■□□□□ 0.12
PHRF1-201ENST00000264555 TTYH1Q9H313 450 aaPredicted RBP15.78■□□□□ 0.12
PHRF1-201ENST00000264555 SRA1Q9HD15 236 aaKnown RBP15.78■□□□□ 0.12
PHRF1-201ENST00000264555 IL20RAQ9UHF4 553 aa15.78■□□□□ 0.12
PHRF1-201ENST00000264555 PCDHGB2Q9Y5G2 931 aa15.78■□□□□ 0.12
PHRF1-201ENST00000264555 GFYI3L273 518 aa15.77■□□□□ 0.12
PHRF1-201ENST00000264555 ADORA3P0DMS8 318 aa15.77■□□□□ 0.12
PHRF1-201ENST00000264555 HMBOX1Q6NT76 420 aa15.77■□□□□ 0.12
PHRF1-201ENST00000264555 Q6ZNB5 142 aa15.77■□□□□ 0.12
PHRF1-201ENST00000264555 ZNF101Q8IZC7 436 aa15.77■□□□□ 0.12
PHRF1-201ENST00000264555 CDS1Q92903 461 aa15.77■□□□□ 0.12
PHRF1-201ENST00000264555 HIST1H2AAQ96QV6 131 aa15.77■□□□□ 0.12
PHRF1-201ENST00000264555 MROQ9BYG7 248 aa15.77■□□□□ 0.12
PHRF1-201ENST00000264555 SUSD2Q9UGT4 822 aa15.77■□□□□ 0.12
PHRF1-201ENST00000264555 PRKCAP17252 672 aa15.77■□□□□ 0.12
PHRF1-201ENST00000264555 GPX2P18283 190 aa15.77■□□□□ 0.12
PHRF1-201ENST00000264555 OPRL1P41146 370 aa15.77■□□□□ 0.12
PHRF1-201ENST00000264555 NSDHLQ15738 373 aa15.77■□□□□ 0.12
PHRF1-201ENST00000264555 ANKRD12Q6UB98 2062 aa15.77■□□□□ 0.12
PHRF1-201ENST00000264555 LILRA3Q8N6C8 439 aaPredicted RBP15.77■□□□□ 0.12
PHRF1-201ENST00000264555 CEP76Q8TAP6 659 aa15.77■□□□□ 0.12
PHRF1-201ENST00000264555 CHFRQ96EP1 664 aa15.77■□□□□ 0.12
PHRF1-201ENST00000264555 CPNE7Q9UBL6 633 aa15.77■□□□□ 0.12
PHRF1-201ENST00000264555 TBX21Q9UL17 535 aa15.77■□□□□ 0.12
PHRF1-201ENST00000264555 RDH16O75452 317 aa15.77■□□□□ 0.11
PHRF1-201ENST00000264555 S1PR1P21453 382 aa15.77■□□□□ 0.11
PHRF1-201ENST00000264555 EIF1AXP47813 144 aaKnown RBP15.77■□□□□ 0.11
PHRF1-201ENST00000264555 SOX2P48431 317 aa15.77■□□□□ 0.11
PHRF1-201ENST00000264555 REEP5Q00765 189 aa15.77■□□□□ 0.11
PHRF1-201ENST00000264555 PODNL1Q6PEZ8 512 aa15.77■□□□□ 0.11
PHRF1-201ENST00000264555 TMEM239Q8WW34 195 aa15.77■□□□□ 0.11
PHRF1-201ENST00000264555 ACOT11Q8WXI4 607 aaPredicted RBP15.77■□□□□ 0.11
PHRF1-201ENST00000264555 TREX2Q9BQ50 279 aaPredicted RBP15.77■□□□□ 0.11
PHRF1-201ENST00000264555 FUZQ9BT04 418 aa15.77■□□□□ 0.11
PHRF1-201ENST00000264555 MS4A8Q9BY19 250 aa15.77■□□□□ 0.11
PHRF1-201ENST00000264555 TMA7Q9Y2S6 64 aaKnown RBP15.77■□□□□ 0.11
PHRF1-201ENST00000264555 SLC5A10A0PJK1 596 aa15.77■□□□□ 0.11
PHRF1-201ENST00000264555 INMT-MINDY4F8WBC2 141 aa15.77■□□□□ 0.11
PHRF1-201ENST00000264555 GFRA2O00451 464 aa15.77■□□□□ 0.11
PHRF1-201ENST00000264555 DAPP51397 102 aa15.77■□□□□ 0.11
PHRF1-201ENST00000264555 ZNF791Q3KP31 576 aaPredicted RBP15.77■□□□□ 0.11
PHRF1-201ENST00000264555 SHFQ7M4L6 423 aa15.77■□□□□ 0.11
PHRF1-201ENST00000264555 CPOQ8IVL8 374 aa15.77■□□□□ 0.11
PHRF1-201ENST00000264555 ZBTB8BQ8NAP8 495 aaPredicted RBP15.77■□□□□ 0.11
PHRF1-201ENST00000264555 OR4K13Q8NH42 304 aa15.77■□□□□ 0.11
PHRF1-201ENST00000264555 NAALAD2Q9Y3Q0 740 aa15.77■□□□□ 0.11
PHRF1-201ENST00000264555 SGK494L7N484 410 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms