RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 CYB561P49447 251 aa13□□□□□ -0.33
VPS25-201ENST00000253794 PNLIPRP2P54317 469 aa13□□□□□ -0.33
VPS25-201ENST00000253794 RPS26P62854 115 aaKnown RBP13□□□□□ -0.33
VPS25-201ENST00000253794 MRPS22P82650 360 aaKnown RBP13□□□□□ -0.33
VPS25-201ENST00000253794 PLCXD2Q0VAA5 305 aa13□□□□□ -0.33
VPS25-201ENST00000253794 DECR1Q16698 335 aa13□□□□□ -0.33
VPS25-201ENST00000253794 ZNF468Q5VIY5 522 aaPredicted RBP13□□□□□ -0.33
VPS25-201ENST00000253794 NANOGP8Q6NSW7 305 aa13□□□□□ -0.33
VPS25-201ENST00000253794 C6orf89Q6UWU4 347 aa13□□□□□ -0.33
VPS25-201ENST00000253794 LINC00696Q6ZRV3 163 aa13□□□□□ -0.33
VPS25-201ENST00000253794 WDR53Q7Z5U6 358 aaPredicted RBP13□□□□□ -0.33
VPS25-201ENST00000253794 ARPINQ7Z6K5 226 aa13□□□□□ -0.33
VPS25-201ENST00000253794 HORMAD2Q8N7B1 307 aa13□□□□□ -0.33
VPS25-201ENST00000253794 BCORP1Q8N888 145 aa13□□□□□ -0.33
VPS25-201ENST00000253794 COX18Q8N8Q8 333 aa13□□□□□ -0.33
VPS25-201ENST00000253794 GOLM1Q8NBJ4 401 aa13□□□□□ -0.33
VPS25-201ENST00000253794 C9orf43Q8TAL5 461 aaPredicted RBP13□□□□□ -0.33
VPS25-201ENST00000253794 GPR151Q8TDV0 419 aa13□□□□□ -0.33
VPS25-201ENST00000253794 ASB15Q8WXK1 588 aa13□□□□□ -0.33
VPS25-201ENST00000253794 DIO2Q92813 273 aa13□□□□□ -0.33
VPS25-201ENST00000253794 NTNG2Q96CW9 530 aa13□□□□□ -0.33
VPS25-201ENST00000253794 OMA1Q96E52 524 aa13□□□□□ -0.33
VPS25-201ENST00000253794 SH3GL1Q99961 368 aa13□□□□□ -0.33
VPS25-201ENST00000253794 HOPXQ9BPY8 73 aaPredicted RBP13□□□□□ -0.33
VPS25-201ENST00000253794 UTP23Q9BRU9 249 aaKnown RBP13□□□□□ -0.33
VPS25-201ENST00000253794 KAT8Q9H7Z6 458 aaKnown RBP13□□□□□ -0.33
VPS25-201ENST00000253794 NANOGQ9H9S0 305 aa13□□□□□ -0.33
VPS25-201ENST00000253794 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13□□□□□ -0.33
VPS25-201ENST00000253794 MRTO4Q9UKD2 239 aaKnown RBP13□□□□□ -0.33
VPS25-201ENST00000253794 TLN1Q9Y490 2541 aaKnown RBP13□□□□□ -0.33
VPS25-201ENST00000253794 GXYLT2A0PJZ3 443 aa12.99□□□□□ -0.33
VPS25-201ENST00000253794 CCT8L1PA6NM43 557 aa12.99□□□□□ -0.33
VPS25-201ENST00000253794 A8MVJ9 347 aa12.99□□□□□ -0.33
VPS25-201ENST00000253794 AIM2O14862 343 aa12.99□□□□□ -0.33
VPS25-201ENST00000253794 NEURL1O76050 574 aa12.99□□□□□ -0.33
VPS25-201ENST00000253794 KCNK2O95069 426 aa12.99□□□□□ -0.33
VPS25-201ENST00000253794 FAM87AP0C7U9 286 aa12.99□□□□□ -0.33
VPS25-201ENST00000253794 CALB2P22676 271 aa12.99□□□□□ -0.33
VPS25-201ENST00000253794 SLC6A2P23975 617 aa12.99□□□□□ -0.33
VPS25-201ENST00000253794 CD96P40200 585 aa12.99□□□□□ -0.33
VPS25-201ENST00000253794 CASRP41180 1078 aa12.99□□□□□ -0.33
VPS25-201ENST00000253794 TNFSF10P50591 281 aa12.99□□□□□ -0.33
VPS25-201ENST00000253794 PSMD4P55036 377 aaKnown RBP12.99□□□□□ -0.33
VPS25-201ENST00000253794 POU6F2P78424 691 aaPredicted RBP12.99□□□□□ -0.33
VPS25-201ENST00000253794 FUT5Q11128 374 aa12.99□□□□□ -0.33
VPS25-201ENST00000253794 NNATQ16517 81 aa12.99□□□□□ -0.33
VPS25-201ENST00000253794 ARHGAP11BQ3KRB8 267 aa12.99□□□□□ -0.33
VPS25-201ENST00000253794 COX20Q5RI15 118 aa12.99□□□□□ -0.33
VPS25-201ENST00000253794 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.99□□□□□ -0.33
VPS25-201ENST00000253794 TNFAIP8L2Q6P589 184 aaPredicted RBP12.99□□□□□ -0.33
VPS25-201ENST00000253794 PCSK4Q6UW60 755 aa12.99□□□□□ -0.33
VPS25-201ENST00000253794 NUP54Q7Z3B4 507 aa12.99□□□□□ -0.33
VPS25-201ENST00000253794 NET1Q7Z628 596 aaPredicted RBP12.99□□□□□ -0.33
VPS25-201ENST00000253794 TMEM156Q8N614 296 aa12.99□□□□□ -0.33
VPS25-201ENST00000253794 EXD3Q8N9H8 876 aa12.99□□□□□ -0.33
VPS25-201ENST00000253794 MDS2Q8NDY4 140 aa12.99□□□□□ -0.33
VPS25-201ENST00000253794 OR4N2Q8NGD1 307 aa12.99□□□□□ -0.33
VPS25-201ENST00000253794 OR5D16Q8NGK9 328 aa12.99□□□□□ -0.33
VPS25-201ENST00000253794 FBXO30Q8TB52 745 aa12.99□□□□□ -0.33
VPS25-201ENST00000253794 PAQR8Q8TEZ7 354 aa12.99□□□□□ -0.33
VPS25-201ENST00000253794 OIT3Q8WWZ8 545 aa12.99□□□□□ -0.33
VPS25-201ENST00000253794 PIK3R3Q92569 461 aa12.99□□□□□ -0.33
VPS25-201ENST00000253794 JADE3Q92613 823 aa12.99□□□□□ -0.33
VPS25-201ENST00000253794 PMM1Q92871 262 aa12.99□□□□□ -0.33
VPS25-201ENST00000253794 CDS1Q92903 461 aa12.99□□□□□ -0.33
VPS25-201ENST00000253794 HGDQ93099 445 aa12.99□□□□□ -0.33
VPS25-201ENST00000253794 TMBIM1Q969X1 311 aa12.99□□□□□ -0.33
VPS25-201ENST00000253794 NSL1Q96IY1 281 aa12.99□□□□□ -0.33
VPS25-201ENST00000253794 ARHGAP9Q9BRR9 750 aa12.99□□□□□ -0.33
VPS25-201ENST00000253794 YIPF4Q9BSR8 244 aa12.99□□□□□ -0.33
VPS25-201ENST00000253794 G6PC3Q9BUM1 346 aa12.99□□□□□ -0.33
VPS25-201ENST00000253794 SAP130Q9H0E3 1048 aa12.99□□□□□ -0.33
VPS25-201ENST00000253794 TMEM38AQ9H6F2 299 aa12.99□□□□□ -0.33
VPS25-201ENST00000253794 POLE3Q9NRF9 147 aa12.99□□□□□ -0.33
VPS25-201ENST00000253794 EXD2Q9NVH0 621 aa12.99□□□□□ -0.33
VPS25-201ENST00000253794 LIPT1Q9Y234 373 aa12.99□□□□□ -0.33
VPS25-201ENST00000253794 AP3M1Q9Y2T2 418 aa12.99□□□□□ -0.33
VPS25-201ENST00000253794 OR10H1Q9Y4A9 318 aa12.99□□□□□ -0.33
VPS25-201ENST00000253794 KCNE3Q9Y6H6 103 aa12.99□□□□□ -0.33
VPS25-201ENST00000253794 PIEZO2Q9H5I5 2752 aa12.99□□□□□ -0.33
VPS25-201ENST00000253794 PRAMEF27A3QJZ7 478 aa12.98□□□□□ -0.33
VPS25-201ENST00000253794 ANKRD33BA6NCL7 494 aa12.98□□□□□ -0.33
VPS25-201ENST00000253794 K7EM74 188 aa12.98□□□□□ -0.33
VPS25-201ENST00000253794 DPM1O60762 260 aa12.98□□□□□ -0.33
VPS25-201ENST00000253794 CBX6O95503 412 aa12.98□□□□□ -0.33
VPS25-201ENST00000253794 IGKV1D-16P01601 117 aa12.98□□□□□ -0.33
VPS25-201ENST00000253794 NGFRP08138 427 aa12.98□□□□□ -0.33
VPS25-201ENST00000253794 OR12D1P0DN82 309 aa12.98□□□□□ -0.33
VPS25-201ENST00000253794 ESRRAP11474 423 aaPredicted RBP12.98□□□□□ -0.33
VPS25-201ENST00000253794 ETFAP13804 333 aa12.98□□□□□ -0.33
VPS25-201ENST00000253794 NUDT2P50583 147 aa12.98□□□□□ -0.33
VPS25-201ENST00000253794 GZMMP51124 257 aa12.98□□□□□ -0.33
VPS25-201ENST00000253794 DSTNP60981 165 aa12.98□□□□□ -0.33
VPS25-201ENST00000253794 EFR3AQ14156 821 aa12.98□□□□□ -0.33
VPS25-201ENST00000253794 SELPLGQ14242 412 aa12.98□□□□□ -0.33
VPS25-201ENST00000253794 CAPRIN1Q14444 709 aaKnown RBP12.98□□□□□ -0.33
VPS25-201ENST00000253794 MAPK11Q15759 364 aa12.98□□□□□ -0.33
VPS25-201ENST00000253794 LACTB2Q53H82 288 aaPredicted RBP12.98□□□□□ -0.33
VPS25-201ENST00000253794 DCST2Q5T1A1 773 aa12.98□□□□□ -0.33
VPS25-201ENST00000253794 ATAD3BQ5T9A4 648 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms