RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 EMDP50402 254 aa16.44■□□□□ 0.22
SHKBP1-224ENST00000600718 PDX1P52945 283 aa16.44■□□□□ 0.22
SHKBP1-224ENST00000600718 OCA2Q04671 838 aa16.44■□□□□ 0.22
SHKBP1-224ENST00000600718 CHRNEQ04844 493 aa16.44■□□□□ 0.22
SHKBP1-224ENST00000600718 TCF15Q12870 199 aa16.44■□□□□ 0.22
SHKBP1-224ENST00000600718 ZNF155Q12901 538 aaPredicted RBP16.44■□□□□ 0.22
SHKBP1-224ENST00000600718 ZNHIT3Q15649 155 aaPredicted RBP16.44■□□□□ 0.22
SHKBP1-224ENST00000600718 MLIPQ5VWP3 458 aa16.44■□□□□ 0.22
SHKBP1-224ENST00000600718 HIPK1Q86Z02 1210 aa16.44■□□□□ 0.22
SHKBP1-224ENST00000600718 TMEM151BQ8IW70 566 aa16.44■□□□□ 0.22
SHKBP1-224ENST00000600718 GPR32P1Q8NGA4 272 aa16.44■□□□□ 0.22
SHKBP1-224ENST00000600718 GPR151Q8TDV0 419 aa16.44■□□□□ 0.22
SHKBP1-224ENST00000600718 ZNF354BQ96LW1 612 aa16.44■□□□□ 0.22
SHKBP1-224ENST00000600718 SDF2Q99470 211 aa16.44■□□□□ 0.22
SHKBP1-224ENST00000600718 CNPPD1Q9BV87 410 aa16.44■□□□□ 0.22
SHKBP1-224ENST00000600718 TRIM45Q9H8W5 580 aaPredicted RBP16.44■□□□□ 0.22
SHKBP1-224ENST00000600718 FOLH1BQ9HBA9 442 aa16.44■□□□□ 0.22
SHKBP1-224ENST00000600718 PNO1Q9NRX1 252 aaKnown RBP16.44■□□□□ 0.22
SHKBP1-224ENST00000600718 RAB26Q9ULW5 256 aa16.44■□□□□ 0.22
SHKBP1-224ENST00000600718 PCDHGA8Q9Y5G5 932 aa16.44■□□□□ 0.22
SHKBP1-224ENST00000600718 HEMK1Q9Y5R4 338 aaPredicted RBP16.44■□□□□ 0.22
SHKBP1-224ENST00000600718 TCRBV16S1A1N1A0A5B0 115 aa16.43■□□□□ 0.22
SHKBP1-224ENST00000600718 TTC36A6NLP5 189 aa16.43■□□□□ 0.22
SHKBP1-224ENST00000600718 C17orf105B2RV13 164 aa16.43■□□□□ 0.22
SHKBP1-224ENST00000600718 E2F6O75461 281 aa16.43■□□□□ 0.22
SHKBP1-224ENST00000600718 RECKO95980 971 aa16.43■□□□□ 0.22
SHKBP1-224ENST00000600718 TNFRSF1BP20333 461 aa16.43■□□□□ 0.22
SHKBP1-224ENST00000600718 SSTR4P31391 388 aa16.43■□□□□ 0.22
SHKBP1-224ENST00000600718 GABRA3P34903 492 aa16.43■□□□□ 0.22
SHKBP1-224ENST00000600718 DCTP40126 519 aa16.43■□□□□ 0.22
SHKBP1-224ENST00000600718 PGDP52209 483 aa16.43■□□□□ 0.22
SHKBP1-224ENST00000600718 ZNF385CQ66K41 422 aaPredicted RBP16.43■□□□□ 0.22
SHKBP1-224ENST00000600718 OLIG3Q7RTU3 272 aa16.43■□□□□ 0.22
SHKBP1-224ENST00000600718 TSEN54Q7Z6J9 526 aaKnown RBP16.43■□□□□ 0.22
SHKBP1-224ENST00000600718 STK32CQ86UX6 486 aa16.43■□□□□ 0.22
SHKBP1-224ENST00000600718 COX18Q8N8Q8 333 aa16.43■□□□□ 0.22
SHKBP1-224ENST00000600718 PTPMT1Q8WUK0 201 aaPredicted RBP16.43■□□□□ 0.22
SHKBP1-224ENST00000600718 TSLPQ969D9 159 aa16.43■□□□□ 0.22
SHKBP1-224ENST00000600718 ZNF300Q96RE9 604 aaPredicted RBP16.43■□□□□ 0.22
SHKBP1-224ENST00000600718 VN1R1Q9GZP7 353 aa16.43■□□□□ 0.22
SHKBP1-224ENST00000600718 Q9H521 79 aa16.43■□□□□ 0.22
SHKBP1-224ENST00000600718 C14orf105Q9NVL8 296 aa16.43■□□□□ 0.22
SHKBP1-224ENST00000600718 MKL2Q9ULH7 1088 aa16.43■□□□□ 0.22
SHKBP1-224ENST00000600718 ERVK-19Q9WJR5 959 aa16.43■□□□□ 0.22
SHKBP1-224ENST00000600718 C7orf72A4D263 438 aa16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 PRAMEF25A6NGN4 478 aa16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 HRKO00198 91 aa16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 EI24O14681 340 aa16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 DIRAS1O95057 198 aa16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 IFNW1P05000 195 aa16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 ALPPP05187 535 aa16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 ARHGDIAP52565 204 aa16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 IST1P53990 364 aa16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 ELAVL1Q15717 326 aaKnown RBP16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 NSDHLQ15738 373 aa16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 CYP27C1Q4G0S4 372 aa16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 TBPL2Q6SJ96 375 aa16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 OVCH1Q7RTY7 1134 aa16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 STT3BQ8TCJ2 826 aa16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 APOBEC4Q8WW27 367 aaKnown RBP16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 PMM1Q92871 262 aa16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 DTNBP1Q96EV8 351 aa16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 SENP5Q96HI0 755 aaPredicted RBP16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 CTRCQ99895 268 aa16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 PINK1Q9BXM7 581 aa16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 RSPO3Q9BXY4 272 aaPredicted RBP16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 AMBRA1Q9C0C7 1298 aa16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 OR10A5Q9H207 317 aa16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 REEP1Q9H902 201 aa16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 CTSFQ9UBX1 484 aa16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 PRODH2Q9UF12 536 aa16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 FAM32AQ9Y421 112 aaKnown RBP16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 WDR45Q9Y484 360 aa16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 ENPP4Q9Y6X5 453 aa16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 TTC28Q96AY4 2481 aa16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 C4orf47A7E2U8 309 aa16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 B4E171 279 aa16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 TMX2-CTNND1H3BSU7 103 aa16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 FCMRO60667 390 aa16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 CPNE3O75131 537 aaKnown RBP16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 STX11O75558 287 aa16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 ZGLP1P0C6A0 271 aa16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 DNAJA1P31689 397 aaKnown RBP16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 TSPAN7P41732 249 aa16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 POU6F2P78424 691 aaPredicted RBP16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 PUM1Q14671 1186 aaKnown RBP eCLIP16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 DCST2Q5T1A1 773 aa16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 OTUD3Q5T2D3 398 aaPredicted RBP16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 SHQ1Q6PI26 577 aaKnown RBP16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 FRRS1Q6ZNA5 592 aa16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 LAPTM4BQ86VI4 370 aa16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 ZNF615Q8N8J6 731 aa16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 PRSS33Q8NF86 280 aa16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 NRBF2Q96F24 287 aa16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 VSTM2LQ96N03 204 aa16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 CMKLR1Q99788 373 aa16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 OSBPL11Q9BXB4 747 aa16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 SAP130Q9H0E3 1048 aa16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 POLE3Q9NRF9 147 aa16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 IFT80Q9P2H3 777 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms