RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 FIGNL2A6NMB9 653 aa20.68■□□□□ 0.9
CCDC9-204ENST00000599398 PDPK1O15530 556 aa20.68■□□□□ 0.9
CCDC9-204ENST00000599398 SKAP2O75563 359 aaPredicted RBP20.68■□□□□ 0.9
CCDC9-204ENST00000599398 IL12BP29460 328 aa20.68■□□□□ 0.9
CCDC9-204ENST00000599398 ARRB2P32121 409 aa20.68■□□□□ 0.9
CCDC9-204ENST00000599398 CDSNQ15517 529 aa20.68■□□□□ 0.9
CCDC9-204ENST00000599398 ZNF630Q2M218 657 aaPredicted RBP20.68■□□□□ 0.9
CCDC9-204ENST00000599398 ANGPTL8Q6UXH0 198 aa20.68■□□□□ 0.9
CCDC9-204ENST00000599398 NPSR1Q6W5P4 371 aa20.68■□□□□ 0.9
CCDC9-204ENST00000599398 RPRMLQ8N4K4 120 aa20.68■□□□□ 0.9
CCDC9-204ENST00000599398 MARVELD2Q8N4S9 558 aa20.68■□□□□ 0.9
CCDC9-204ENST00000599398 TMCO6Q96DC7 493 aa20.68■□□□□ 0.9
CCDC9-204ENST00000599398 TMEM41AQ96HV5 264 aa20.68■□□□□ 0.9
CCDC9-204ENST00000599398 PPP3R2Q96LZ3 170 aa20.68■□□□□ 0.9
CCDC9-204ENST00000599398 ADOQ96SZ5 270 aa20.68■□□□□ 0.9
CCDC9-204ENST00000599398 REEP4Q9H6H4 257 aa20.68■□□□□ 0.9
CCDC9-204ENST00000599398 SSU72Q9NP77 194 aaKnown RBP20.68■□□□□ 0.9
CCDC9-204ENST00000599398 KCNK9Q9NPC2 374 aa20.68■□□□□ 0.9
CCDC9-204ENST00000599398 CHST11Q9NPF2 352 aa20.68■□□□□ 0.9
CCDC9-204ENST00000599398 SH3BP4Q9P0V3 963 aa20.68■□□□□ 0.9
CCDC9-204ENST00000599398 GIMAP2Q9UG22 337 aa20.68■□□□□ 0.9
CCDC9-204ENST00000599398 C15orf41Q9Y2V0 281 aa20.68■□□□□ 0.9
CCDC9-204ENST00000599398 C2orf72A6NCS6 295 aa20.67■□□□□ 0.9
CCDC9-204ENST00000599398 PRAMEF25A6NGN4 478 aa20.67■□□□□ 0.9
CCDC9-204ENST00000599398 OR6C70A6NIJ9 312 aa20.67■□□□□ 0.9
CCDC9-204ENST00000599398 PEX11AO75192 247 aa20.67■□□□□ 0.9
CCDC9-204ENST00000599398 HSPA4LO95757 839 aa20.67■□□□□ 0.9
CCDC9-204ENST00000599398 MYZAPP0CAP1 466 aa20.67■□□□□ 0.9
CCDC9-204ENST00000599398 ENDOUP21128 410 aaKnown RBP20.67■□□□□ 0.9
CCDC9-204ENST00000599398 ACVR2AP27037 513 aa20.67■□□□□ 0.9
CCDC9-204ENST00000599398 GPC1P35052 558 aa20.67■□□□□ 0.9
CCDC9-204ENST00000599398 ASMTP46597 345 aa20.67■□□□□ 0.9
CCDC9-204ENST00000599398 HSPB3Q12988 150 aa20.67■□□□□ 0.9
CCDC9-204ENST00000599398 FNDC7Q5VTL7 733 aa20.67■□□□□ 0.9
CCDC9-204ENST00000599398 SLC30A6Q6NXT4 461 aa20.67■□□□□ 0.9
CCDC9-204ENST00000599398 ZNF551Q7Z340 670 aaPredicted RBP20.67■□□□□ 0.9
CCDC9-204ENST00000599398 CROCCP2Q86T23 111 aa20.67■□□□□ 0.9
CCDC9-204ENST00000599398 OR1J4Q8NGS1 313 aa20.67■□□□□ 0.9
CCDC9-204ENST00000599398 NEIL3Q8TAT5 605 aa20.67■□□□□ 0.9
CCDC9-204ENST00000599398 CA5BP1Q8WTZ4 195 aa20.67■□□□□ 0.9
CCDC9-204ENST00000599398 CIDECQ96AQ7 238 aaPredicted RBP20.67■□□□□ 0.9
CCDC9-204ENST00000599398 GALNT9Q9HCQ5 603 aa20.67■□□□□ 0.9
CCDC9-204ENST00000599398 C19orf53Q9UNZ5 99 aaPredicted RBP20.67■□□□□ 0.9
CCDC9-204ENST00000599398 PKDREJQ9NTG1 2253 aa20.66■□□□□ 0.9
CCDC9-204ENST00000599398 ITPR2Q14571 2701 aa20.66■□□□□ 0.9
CCDC9-204ENST00000599398 C15orf38-AP3S2A0A0A6YYH1 394 aa20.66■□□□□ 0.9
CCDC9-204ENST00000599398 TMEM114B3SHH9 223 aa20.66■□□□□ 0.9
CCDC9-204ENST00000599398 UPK1AO00322 258 aa20.66■□□□□ 0.9
CCDC9-204ENST00000599398 PLOD2O00469 737 aa20.66■□□□□ 0.9
CCDC9-204ENST00000599398 TM9SF1O15321 606 aa20.66■□□□□ 0.9
CCDC9-204ENST00000599398 HNRNPRO43390 633 aaKnown RBP20.66■□□□□ 0.9
CCDC9-204ENST00000599398 ABCB7O75027 752 aa20.66■□□□□ 0.9
CCDC9-204ENST00000599398 ICOSLGO75144 302 aa20.66■□□□□ 0.9
CCDC9-204ENST00000599398 LYPLA1O75608 230 aaPredicted RBP20.66■□□□□ 0.9
CCDC9-204ENST00000599398 BCKDHAP12694 445 aa20.66■□□□□ 0.9
CCDC9-204ENST00000599398 ELAVL4P26378 380 aaKnown RBP20.66■□□□□ 0.9
CCDC9-204ENST00000599398 MAPK1P28482 360 aa20.66■□□□□ 0.9
CCDC9-204ENST00000599398 PSPHP78330 225 aa20.66■□□□□ 0.9
CCDC9-204ENST00000599398 PMPCAQ10713 525 aa20.66■□□□□ 0.9
CCDC9-204ENST00000599398 CHI3L2Q15782 390 aa20.66■□□□□ 0.9
CCDC9-204ENST00000599398 ATP6AP1LQ52LC2 224 aa20.66■□□□□ 0.9
CCDC9-204ENST00000599398 ZNF385BQ569K4 471 aa20.66■□□□□ 0.9
CCDC9-204ENST00000599398 XKR7Q5GH72 579 aa20.66■□□□□ 0.9
CCDC9-204ENST00000599398 TIGD3Q6B0B8 471 aa20.66■□□□□ 0.9
CCDC9-204ENST00000599398 TMEM81Q6P7N7 255 aa20.66■□□□□ 0.9
CCDC9-204ENST00000599398 LARP4Q71RC2 724 aaKnown RBP eCLIP20.66■□□□□ 0.9
CCDC9-204ENST00000599398 OR4N2Q8NGD1 307 aa20.66■□□□□ 0.9
CCDC9-204ENST00000599398 OR6Y1Q8NGX8 325 aa20.66■□□□□ 0.9
CCDC9-204ENST00000599398 ZFP28Q8NHY6 868 aa20.66■□□□□ 0.9
CCDC9-204ENST00000599398 RND1Q92730 232 aa20.66■□□□□ 0.9
CCDC9-204ENST00000599398 MARVELD3Q96A59 401 aa20.66■□□□□ 0.9
CCDC9-204ENST00000599398 ELP4Q96EB1 424 aa20.66■□□□□ 0.9
CCDC9-204ENST00000599398 SERPINE1P05121 402 aa20.65■□□□□ 0.9
CCDC9-204ENST00000599398 CDK9P50750 372 aaKnown RBP20.65■□□□□ 0.9
CCDC9-204ENST00000599398 NUP107P57740 925 aa20.65■□□□□ 0.9
CCDC9-204ENST00000599398 SNTA1Q13424 505 aa20.65■□□□□ 0.9
CCDC9-204ENST00000599398 EFR3AQ14156 821 aa20.65■□□□□ 0.9
CCDC9-204ENST00000599398 B3GNT6Q6ZMB0 384 aa20.65■□□□□ 0.9
CCDC9-204ENST00000599398 ACAD11Q709F0 780 aa20.65■□□□□ 0.9
CCDC9-204ENST00000599398 OR2L13Q8N349 312 aa20.65■□□□□ 0.9
CCDC9-204ENST00000599398 EFHD2Q96C19 240 aaPredicted RBP20.65■□□□□ 0.9
CCDC9-204ENST00000599398 SLC35A4Q96G79 324 aa20.65■□□□□ 0.9
CCDC9-204ENST00000599398 ZNF764Q96H86 408 aaPredicted RBP20.65■□□□□ 0.9
CCDC9-204ENST00000599398 C3orf30Q96M34 536 aa20.65■□□□□ 0.9
CCDC9-204ENST00000599398 C1orf50Q9BV19 199 aa20.65■□□□□ 0.9
CCDC9-204ENST00000599398 UBQLN3Q9H347 655 aa20.65■□□□□ 0.9
CCDC9-204ENST00000599398 MAPRE3Q9UPY8 281 aa20.65■□□□□ 0.9
CCDC9-204ENST00000599398 SNPHO15079 494 aa20.64■□□□□ 0.89
CCDC9-204ENST00000599398 BIRC5O15392 142 aa20.64■□□□□ 0.89
CCDC9-204ENST00000599398 ITM2AO43736 263 aa20.64■□□□□ 0.89
CCDC9-204ENST00000599398 TSPAN2O60636 221 aa20.64■□□□□ 0.89
CCDC9-204ENST00000599398 TBX19O60806 448 aa20.64■□□□□ 0.89
CCDC9-204ENST00000599398 WDR1O75083 606 aa20.64■□□□□ 0.89
CCDC9-204ENST00000599398 ERLIN1O75477 346 aa20.64■□□□□ 0.89
CCDC9-204ENST00000599398 HPNP05981 417 aa20.64■□□□□ 0.89
CCDC9-204ENST00000599398 PTPN6P29350 595 aa20.64■□□□□ 0.89
CCDC9-204ENST00000599398 HPCAL1P37235 193 aa20.64■□□□□ 0.89
CCDC9-204ENST00000599398 PTGDSP41222 190 aa20.64■□□□□ 0.89
CCDC9-204ENST00000599398 MANFP55145 182 aaKnown RBP20.64■□□□□ 0.89
CCDC9-204ENST00000599398 PSG6Q00889 435 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms