RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 TPOP07202 933 aa10.84□□□□□ -0.67
RAB5C-204ENST00000547517 RFPL3SP0C7P2 107 aa10.84□□□□□ -0.67
RAB5C-204ENST00000547517 KITP10721 976 aa10.84□□□□□ -0.67
RAB5C-204ENST00000547517 LAMP1P11279 417 aa10.84□□□□□ -0.67
RAB5C-204ENST00000547517 NAGAP17050 411 aa10.84□□□□□ -0.67
RAB5C-204ENST00000547517 GDF1P27539 372 aa10.84□□□□□ -0.67
RAB5C-204ENST00000547517 PTGS2P35354 604 aa10.84□□□□□ -0.67
RAB5C-204ENST00000547517 CASP3P42574 277 aa10.84□□□□□ -0.67
RAB5C-204ENST00000547517 FRKP42685 505 aaPredicted RBP10.84□□□□□ -0.67
RAB5C-204ENST00000547517 PSG6Q00889 435 aa10.84□□□□□ -0.67
RAB5C-204ENST00000547517 EMX2Q04743 252 aa10.84□□□□□ -0.67
RAB5C-204ENST00000547517 ZNHIT3Q15649 155 aaPredicted RBP10.84□□□□□ -0.67
RAB5C-204ENST00000547517 HYAL4Q2M3T9 481 aa10.84□□□□□ -0.67
RAB5C-204ENST00000547517 ATG16L1Q676U5 607 aa10.84□□□□□ -0.67
RAB5C-204ENST00000547517 ARHGAP11AQ6P4F7 1023 aa10.84□□□□□ -0.67
RAB5C-204ENST00000547517 C3P1Q6ZMU1 363 aa10.84□□□□□ -0.67
RAB5C-204ENST00000547517 Q6ZPB1 254 aaPredicted RBP10.84□□□□□ -0.67
RAB5C-204ENST00000547517 HDXQ7Z353 690 aa10.84□□□□□ -0.67
RAB5C-204ENST00000547517 CD163Q86VB7 1156 aa10.84□□□□□ -0.67
RAB5C-204ENST00000547517 TRIM42Q8IWZ5 723 aa10.84□□□□□ -0.67
RAB5C-204ENST00000547517 GOLGA6L1Q8N7Z2 621 aa10.84□□□□□ -0.67
RAB5C-204ENST00000547517 OR4N2Q8NGD1 307 aa10.84□□□□□ -0.67
RAB5C-204ENST00000547517 FBXO30Q8TB52 745 aa10.84□□□□□ -0.67
RAB5C-204ENST00000547517 RAB3IL1Q8TBN0 382 aa10.84□□□□□ -0.67
RAB5C-204ENST00000547517 NUDT8Q8WV74 236 aa10.84□□□□□ -0.67
RAB5C-204ENST00000547517 RELTQ969Z4 430 aa10.84□□□□□ -0.67
RAB5C-204ENST00000547517 EFHD2Q96C19 240 aaPredicted RBP10.84□□□□□ -0.67
RAB5C-204ENST00000547517 COL21A1Q96P44 957 aa10.84□□□□□ -0.67
RAB5C-204ENST00000547517 PSMG3-AS1Q96PY0 264 aa10.84□□□□□ -0.67
RAB5C-204ENST00000547517 ADOQ96SZ5 270 aa10.84□□□□□ -0.67
RAB5C-204ENST00000547517 ANGPTL4Q9BY76 406 aa10.84□□□□□ -0.67
RAB5C-204ENST00000547517 LDAHQ9H6V9 325 aa10.84□□□□□ -0.67
RAB5C-204ENST00000547517 MANSC1Q9H8J5 431 aa10.84□□□□□ -0.67
RAB5C-204ENST00000547517 GALNT9Q9HCQ5 603 aa10.84□□□□□ -0.67
RAB5C-204ENST00000547517 PLSCR2Q9NRY7 297 aa10.84□□□□□ -0.67
RAB5C-204ENST00000547517 ACSS1Q9NUB1 689 aaPredicted RBP10.84□□□□□ -0.67
RAB5C-204ENST00000547517 THAP1Q9NVV9 213 aa10.84□□□□□ -0.67
RAB5C-204ENST00000547517 ASIC5Q9NY37 505 aa10.84□□□□□ -0.67
RAB5C-204ENST00000547517 PTPN13Q12923 2485 aa10.83□□□□□ -0.68
RAB5C-204ENST00000547517 A0A1W2PRB8 838 aa10.83□□□□□ -0.68
RAB5C-204ENST00000547517 ANKRD33BA6NCL7 494 aa10.83□□□□□ -0.68
RAB5C-204ENST00000547517 WIPF3A6NGB9 483 aa10.83□□□□□ -0.68
RAB5C-204ENST00000547517 OR6C70A6NIJ9 312 aa10.83□□□□□ -0.68
RAB5C-204ENST00000547517 GNB5O14775 395 aa10.83□□□□□ -0.68
RAB5C-204ENST00000547517 TSPAN2O60636 221 aa10.83□□□□□ -0.68
RAB5C-204ENST00000547517 SNX4O95219 450 aa10.83□□□□□ -0.68
RAB5C-204ENST00000547517 IFI6P09912 130 aa10.83□□□□□ -0.68
RAB5C-204ENST00000547517 ESRRAP11474 423 aaPredicted RBP10.83□□□□□ -0.68
RAB5C-204ENST00000547517 PRPS1L1P21108 318 aa10.83□□□□□ -0.68
RAB5C-204ENST00000547517 RFX3P48380 749 aa10.83□□□□□ -0.68
RAB5C-204ENST00000547517 PRKAG1P54619 331 aa10.83□□□□□ -0.68
RAB5C-204ENST00000547517 DIO3P55073 304 aa10.83□□□□□ -0.68
RAB5C-204ENST00000547517 PSPHP78330 225 aa10.83□□□□□ -0.68
RAB5C-204ENST00000547517 SMU1Q2TAY7 513 aa10.83□□□□□ -0.68
RAB5C-204ENST00000547517 CPTPQ5TA50 214 aa10.83□□□□□ -0.68
RAB5C-204ENST00000547517 TMEM198Q66K66 360 aa10.83□□□□□ -0.68
RAB5C-204ENST00000547517 PAOXQ6QHF9 649 aa10.83□□□□□ -0.68
RAB5C-204ENST00000547517 ANGPTL8Q6UXH0 198 aa10.83□□□□□ -0.68
RAB5C-204ENST00000547517 NCCRP1Q6ZVX7 275 aaPredicted RBP10.83□□□□□ -0.68
RAB5C-204ENST00000547517 LARP4Q71RC2 724 aaKnown RBP eCLIP10.83□□□□□ -0.682e-8■■■□□ 17
RAB5C-204ENST00000547517 TRILQ7L0X0 811 aa10.83□□□□□ -0.68
RAB5C-204ENST00000547517 NUP54Q7Z3B4 507 aa10.83□□□□□ -0.68
RAB5C-204ENST00000547517 PACS2Q86VP3 889 aa10.83□□□□□ -0.68
RAB5C-204ENST00000547517 FAM57AQ8TBR7 257 aa10.83□□□□□ -0.68
RAB5C-204ENST00000547517 TMCO6Q96DC7 493 aa10.83□□□□□ -0.68
RAB5C-204ENST00000547517 SLC35A4Q96G79 324 aa10.83□□□□□ -0.68
RAB5C-204ENST00000547517 CCDC120Q96HB5 630 aa10.83□□□□□ -0.68
RAB5C-204ENST00000547517 MS4A4EQ96PG1 132 aa10.83□□□□□ -0.68
RAB5C-204ENST00000547517 LMF2Q9BU23 707 aaKnown RBP10.83□□□□□ -0.68
RAB5C-204ENST00000547517 SLC6A15Q9H2J7 730 aa10.83□□□□□ -0.68
RAB5C-204ENST00000547517 EXO5Q9H790 373 aa10.83□□□□□ -0.68
RAB5C-204ENST00000547517 MEAF6Q9HAF1 191 aa10.83□□□□□ -0.68
RAB5C-204ENST00000547517 Q9N2J8 555 aa10.83□□□□□ -0.68
RAB5C-204ENST00000547517 ATAD3AQ9NVI7 634 aa10.83□□□□□ -0.68
RAB5C-204ENST00000547517 TNFRSF10DQ9UBN6 386 aa10.83□□□□□ -0.68
RAB5C-204ENST00000547517 C15orf41Q9Y2V0 281 aa10.83□□□□□ -0.68
RAB5C-204ENST00000547517 SNX8Q9Y5X2 465 aa10.83□□□□□ -0.68
RAB5C-204ENST00000547517 HECTD1Q9ULT8 2610 aa10.83□□□□□ -0.68
RAB5C-204ENST00000547517 TRGV5A0A0B4J1U4 118 aa10.82□□□□□ -0.68
RAB5C-204ENST00000547517 C2orf72A6NCS6 295 aa10.82□□□□□ -0.68
RAB5C-204ENST00000547517 NPIPA2E9PIF3 369 aa10.82□□□□□ -0.68
RAB5C-204ENST00000547517 NPIPA3F8WFD2 350 aa10.82□□□□□ -0.68
RAB5C-204ENST00000547517 SDHDO14521 159 aa10.82□□□□□ -0.68
RAB5C-204ENST00000547517 HDAC3O15379 428 aa10.82□□□□□ -0.68
RAB5C-204ENST00000547517 RRP9O43818 475 aaKnown RBP10.82□□□□□ -0.68
RAB5C-204ENST00000547517 ABCB7O75027 752 aa10.82□□□□□ -0.68
RAB5C-204ENST00000547517 ICOSLGO75144 302 aa10.82□□□□□ -0.68
RAB5C-204ENST00000547517 C6orf47O95873 294 aa10.82□□□□□ -0.68
RAB5C-204ENST00000547517 IGHG3P01860 377 aa10.82□□□□□ -0.68
RAB5C-204ENST00000547517 LBPP18428 481 aa10.82□□□□□ -0.68
RAB5C-204ENST00000547517 PTGDSP41222 190 aa10.82□□□□□ -0.68
RAB5C-204ENST00000547517 TRPC1P48995 793 aa10.82□□□□□ -0.68
RAB5C-204ENST00000547517 MAN2A2P49641 1150 aa10.82□□□□□ -0.68
RAB5C-204ENST00000547517 CLDN8P56748 225 aa10.82□□□□□ -0.68
RAB5C-204ENST00000547517 OCRLQ01968 901 aa10.82□□□□□ -0.68
RAB5C-204ENST00000547517 EFR3AQ14156 821 aa10.82□□□□□ -0.68
RAB5C-204ENST00000547517 SLC10A1Q14973 349 aa10.82□□□□□ -0.68
RAB5C-204ENST00000547517 TOMM20Q15388 145 aa10.82□□□□□ -0.68
RAB5C-204ENST00000547517 PGS1Q32NB8 556 aa10.82□□□□□ -0.68
RAB5C-204ENST00000547517 FNDC7Q5VTL7 733 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms