RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 RPS13P62277 151 aaKnown RBP7.43□□□□□ -1.22
VPS13D-211ENST00000543710 GALK2Q01415 458 aa7.43□□□□□ -1.22
VPS13D-211ENST00000543710 RIN1Q13671 783 aa7.43□□□□□ -1.22
VPS13D-211ENST00000543710 ARSIQ5FYB1 569 aa7.43□□□□□ -1.22
VPS13D-211ENST00000543710 RAB11FIP2Q7L804 512 aa7.43□□□□□ -1.22
VPS13D-211ENST00000543710 RNF130Q86XS8 419 aa7.43□□□□□ -1.22
VPS13D-211ENST00000543710 MISPQ8IVT2 679 aa7.43□□□□□ -1.22
VPS13D-211ENST00000543710 SIMC1Q8NDZ2 872 aa7.43□□□□□ -1.22
VPS13D-211ENST00000543710 OR13J1Q8NGT2 312 aa7.43□□□□□ -1.22
VPS13D-211ENST00000543710 ZNF417Q8TAU3 575 aa7.43□□□□□ -1.22
VPS13D-211ENST00000543710 OR4K3Q96R72 315 aa7.43□□□□□ -1.22
VPS13D-211ENST00000543710 PHOX2BQ99453 314 aa7.43□□□□□ -1.22
VPS13D-211ENST00000543710 PNO1Q9NRX1 252 aaKnown RBP7.43□□□□□ -1.22
VPS13D-211ENST00000543710 AJAP1Q9UKB5 411 aaPredicted RBP7.43□□□□□ -1.22
VPS13D-211ENST00000543710 ABCA3Q99758 1704 aa7.43□□□□□ -1.22
VPS13D-211ENST00000543710 DLEC1Q9Y238 1755 aa7.43□□□□□ -1.22
VPS13D-211ENST00000543710 IGKV6-21A0A0C4DH24 114 aa7.43□□□□□ -1.22
VPS13D-211ENST00000543710 FAM149AA5PLN7 773 aa7.43□□□□□ -1.22
VPS13D-211ENST00000543710 TNFSF14O43557 240 aa7.43□□□□□ -1.22
VPS13D-211ENST00000543710 AP1G1O43747 822 aa7.43□□□□□ -1.22
VPS13D-211ENST00000543710 SRPX2O60687 465 aaPredicted RBP7.43□□□□□ -1.22
VPS13D-211ENST00000543710 RBMXL2O75526 392 aaKnown RBP7.43□□□□□ -1.22
VPS13D-211ENST00000543710 FARS2O95363 451 aaKnown RBP7.43□□□□□ -1.22
VPS13D-211ENST00000543710 OLFM2O95897 454 aa7.43□□□□□ -1.22
VPS13D-211ENST00000543710 CPT2P23786 658 aa7.43□□□□□ -1.22
VPS13D-211ENST00000543710 CHATP28329 748 aa7.43□□□□□ -1.22
VPS13D-211ENST00000543710 MTNR1AP48039 350 aa7.43□□□□□ -1.22
VPS13D-211ENST00000543710 CCL11P51671 97 aa7.43□□□□□ -1.22
VPS13D-211ENST00000543710 HNRNPA0Q13151 305 aaKnown RBP7.43□□□□□ -1.22
VPS13D-211ENST00000543710 SERTAD2Q14140 314 aa7.43□□□□□ -1.22
VPS13D-211ENST00000543710 EXOC3L2Q2M3D2 409 aa7.43□□□□□ -1.22
VPS13D-211ENST00000543710 IQCHQ86VS3 1027 aa7.43□□□□□ -1.22
VPS13D-211ENST00000543710 PDZD9Q8IXQ8 264 aa7.43□□□□□ -1.22
VPS13D-211ENST00000543710 OR13C3Q8NGS6 347 aa7.43□□□□□ -1.22
VPS13D-211ENST00000543710 OR52J3Q8NH60 311 aa7.43□□□□□ -1.22
VPS13D-211ENST00000543710 SPPL3Q8TCT6 385 aa7.43□□□□□ -1.22
VPS13D-211ENST00000543710 MUCL1Q96DR8 90 aa7.43□□□□□ -1.22
VPS13D-211ENST00000543710 TMED9Q9BVK6 235 aa7.43□□□□□ -1.22
VPS13D-211ENST00000543710 PMF1-BGLAPU3KQ54 211 aa7.43□□□□□ -1.22
VPS13D-211ENST00000543710 A0A1B0GUL6 1792 aa7.43□□□□□ -1.22
VPS13D-211ENST00000543710 TCRBV7S3A2A0A539 114 aa7.43□□□□□ -1.22
VPS13D-211ENST00000543710 DRGXA6NNA5 263 aa7.43□□□□□ -1.22
VPS13D-211ENST00000543710 E7EQ34 232 aa7.43□□□□□ -1.22
VPS13D-211ENST00000543710 BUD23O43709 281 aaKnown RBP7.43□□□□□ -1.22
VPS13D-211ENST00000543710 MT-CYBP00156 380 aaPredicted RBP7.43□□□□□ -1.22
VPS13D-211ENST00000543710 CD27P26842 260 aa7.43□□□□□ -1.22
VPS13D-211ENST00000543710 LASP1Q14847 261 aaKnown RBP7.43□□□□□ -1.22
VPS13D-211ENST00000543710 C6orf136Q5SQH8 315 aa7.43□□□□□ -1.22
VPS13D-211ENST00000543710 DPPA4Q7L190 304 aa7.43□□□□□ -1.22
VPS13D-211ENST00000543710 PHTF2Q8N3S3 785 aa7.43□□□□□ -1.22
VPS13D-211ENST00000543710 TRMT61AQ96FX7 289 aaKnown RBP7.43□□□□□ -1.22
VPS13D-211ENST00000543710 OR5B12Q96R08 314 aa7.43□□□□□ -1.22
VPS13D-211ENST00000543710 NTMT1Q9BV86 223 aa7.43□□□□□ -1.22
VPS13D-211ENST00000543710 NMUR1Q9HB89 426 aa7.43□□□□□ -1.22
VPS13D-211ENST00000543710 TREM1Q9NP99 234 aa7.43□□□□□ -1.22
VPS13D-211ENST00000543710 KLRF1Q9NZS2 232 aa7.43□□□□□ -1.22
VPS13D-211ENST00000543710 PADI1Q9ULC6 663 aa7.43□□□□□ -1.22
VPS13D-211ENST00000543710 NME7Q9Y5B8 376 aa7.43□□□□□ -1.22
VPS13D-211ENST00000543710 A0A1W2PQU0 124 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 RNF212BA8MTL3 300 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 SLC1A7O00341 560 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 PRICKLE3O43900 615 aaPredicted RBP7.42□□□□□ -1.22
VPS13D-211ENST00000543710 RFPL2O75678 378 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 DIRAS3O95661 229 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 LMO2P25791 158 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 CD82P27701 267 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 CHRNA4P43681 627 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 GABREP78334 506 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 NPRL3Q12980 569 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 SELPLGQ14242 412 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 C3orf33Q6P1S2 294 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 TRMT10BQ6PF06 316 aaKnown RBP7.42□□□□□ -1.22
VPS13D-211ENST00000543710 Q6ZSR6 202 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 KIAA0907Q7Z7F0 614 aaPredicted RBP7.42□□□□□ -1.22
VPS13D-211ENST00000543710 ZDHHC1Q8WTX9 485 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 SLAMF9Q96A28 289 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 GON7Q9BXV9 100 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 NOP16Q9Y3C1 178 aaKnown RBP7.42□□□□□ -1.22
VPS13D-211ENST00000543710 MYH8P13535 1937 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 MYBPHLA2RUH7 354 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 ZNF878C9JN71 531 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 TSFMP43897 325 aaKnown RBP7.42□□□□□ -1.22
VPS13D-211ENST00000543710 GANABQ14697 944 aaKnown RBP7.42□□□□□ -1.22
VPS13D-211ENST00000543710 CNN3Q15417 329 aaKnown RBP7.42□□□□□ -1.22
VPS13D-211ENST00000543710 BCL2L15Q5TBC7 163 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 OR13C4Q8NGS5 318 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 ZFAND1Q8TCF1 268 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 ZNF597Q96LX8 424 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 POLDIP3Q9BY77 421 aaKnown RBP7.42□□□□□ -1.22
VPS13D-211ENST00000543710 ATG10Q9H0Y0 220 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 TCRBV3S1A0A5B6 114 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 A6NHS1 94 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 J3QLW9 94 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 SC5DO75845 299 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 OR7A10O76100 309 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 CLIC3O95833 236 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 IL1AP01583 271 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 CD3GP09693 182 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 ZNF19P17023 458 aa7.42□□□□□ -1.22
VPS13D-211ENST00000543710 CD97P48960 835 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms