RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 HACD2Q6Y1H2 254 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 KDM1BQ8NB78 822 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 AKR7LQ8NHP1 331 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 FCRL3Q96P31 734 aaPredicted RBP9.48□□□□□ -0.89
COL4A6-208ENST00000538570 ZNF436Q9C0F3 470 aaPredicted RBP9.48□□□□□ -0.89
COL4A6-208ENST00000538570 LHPPQ9H008 270 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 C11orf49Q9H6J7 331 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 IRS2Q9Y4H2 1338 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 A6NLC8 198 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 EFCAB7A8K855 629 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 TSPAN6O43657 245 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 INCA1Q0VD86 236 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 GBX1Q14549 363 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 UNC50Q53HI1 259 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 SMYD5Q6GMV2 418 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 GRASPQ7Z6J2 395 aaPredicted RBP9.47□□□□□ -0.89
COL4A6-208ENST00000538570 DCP2Q8IU60 420 aaKnown RBP9.47□□□□□ -0.89
COL4A6-208ENST00000538570 DEFB119Q8N690 84 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 OR5T1Q8NG75 326 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 OR5H2Q8NGV7 314 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 MINDY3Q9H8M7 445 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 AP1M2Q9Y6Q5 423 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 MTMR11A4FU01 709 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 JMJD7P0C870 316 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 TLE3Q04726 772 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 UNQ6126/PRO20091Q6UXV3 157 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 CDC6Q99741 560 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 HDHD5Q9BXW7 423 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 GPRC5BQ9NZH0 403 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 KCNIP1Q9NZI2 227 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 B4GALT7Q9UBV7 327 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 Q9Y3F1 56 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 NME7Q9Y5B8 376 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 SLIT2O94813 1529 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 SLC1A7O00341 560 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 HCRTO43612 131 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 EIF2DP41214 584 aaKnown RBP9.47□□□□□ -0.89
COL4A6-208ENST00000538570 RPS21P63220 83 aaKnown RBP9.47□□□□□ -0.89
COL4A6-208ENST00000538570 RCAN2Q14206 197 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 RSU1Q15404 277 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 SLC18B1Q6NT16 456 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 C3P1Q6ZMU1 363 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 Q6ZVL8 140 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 C6orf120Q7Z4R8 191 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 BEST4Q8NFU0 473 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 OR56B2PQ8NGI1 322 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 STRADBQ9C0K7 418 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 TLR9Q9NR96 1032 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 KLHL9Q9P2J3 617 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 ADAM18Q9Y3Q7 739 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 NFAT5O94916 1531 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 A0A1B0GV50 99 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 SCAMP2O15127 329 aaKnown RBP9.47□□□□□ -0.89
COL4A6-208ENST00000538570 ATE1O95260 518 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 RHOP08100 348 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 RAC2P15153 192 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 DLSTP36957 453 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 GPR4P46093 362 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 POU3F4P49335 361 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 RNF4P78317 190 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 FOXK1P85037 733 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 APOFQ13790 326 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 ELOAQ14241 798 aaKnown RBP9.47□□□□□ -0.89
COL4A6-208ENST00000538570 CCL14Q16627 93 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 SFRP4Q6FHJ7 346 aaPredicted RBP9.47□□□□□ -0.89
COL4A6-208ENST00000538570 ERN2Q76MJ5 926 aaKnown RBP9.47□□□□□ -0.89
COL4A6-208ENST00000538570 MS4A15Q8N5U1 240 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 CHDHQ8NE62 594 aaPredicted RBP9.47□□□□□ -0.89
COL4A6-208ENST00000538570 OR52E2Q8NGJ4 325 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 NDNFQ8TB73 568 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 NANPQ8TBE9 248 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 DAZLQ92904 295 aaKnown RBP9.47□□□□□ -0.89
COL4A6-208ENST00000538570 GLYATL1Q969I3 302 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 ELMOD3Q96FG2 381 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 LRRC46Q96FV0 321 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 RANBP9Q96S59 729 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 PITX2Q99697 317 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 SYT3Q9BQG1 590 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 CACNG6Q9BXT2 260 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 LRFN1Q9P244 771 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 OR7A17O14581 309 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 LEFTY1O75610 366 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 IRF2P14316 349 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 DRD2P14416 443 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 MYF6P23409 242 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 RFC2P35250 354 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 SNU13P55769 128 aaKnown RBP9.47□□□□□ -0.89
COL4A6-208ENST00000538570 RPS15AP62244 130 aaKnown RBP9.47□□□□□ -0.89
COL4A6-208ENST00000538570 ARHGAP11BQ3KRB8 267 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 TTLL10Q6ZVT0 673 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 WDR53Q7Z5U6 358 aaPredicted RBP9.47□□□□□ -0.89
COL4A6-208ENST00000538570 TMEM173Q86WV6 379 aaPredicted RBP9.47□□□□□ -0.89
COL4A6-208ENST00000538570 C7orf43Q8WVR3 580 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 ZFP57Q9NU63 452 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 FAM86C1Q9NVL1 165 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 SMOXQ9NWM0 555 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 RBPJLQ9UBG7 517 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 PLEKHM1Q9Y4G2 1056 aa9.47□□□□□ -0.89
COL4A6-208ENST00000538570 AMY2AP04746 511 aa9.46□□□□□ -0.89
COL4A6-208ENST00000538570 PITPNBP48739 271 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms