RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	ENPP5	Q9UJA9	477 aa		10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006		A0A087WV62	115 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006		A0A1W2PRQ8	180 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	SH3PXD2B	A1X283	911 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	SNTN	A6NMZ2	147 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	METTL12	A8MUP2	240 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	SLC22A1	O15245	554 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	PCDHGA12	O60330	932 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	GALR3	O60755	368 aa	Predicted RBP	10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	SOX30	O94993	753 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	GPR75	O95800	540 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	LGI1	O95970	557 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	CSF2	P04141	144 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	SMIM10L1	P0DMW3	83 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	ST6GAL1	P15907	406 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	MAP2K4	P45985	399 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	LIMS1	P48059	325 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	ST3GAL3	Q11203	375 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	STX4	Q12846	297 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	SLC13A2	Q13183	592 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	DGCR6	Q14129	220 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	PUM1	Q14671	1186 aa	Known RBP eCLIP	10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	NR1D2	Q14995	579 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	TBCE	Q15813	527 aa	Predicted RBP	10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	C6orf132	Q5T0Z8	1188 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	MLIP	Q5VWP3	458 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	XAF1	Q6GPH4	301 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	ZCCHC12	Q6PEW1	402 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	DHRS4L2	Q6PKH6	230 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	FAM111B	Q6SJ93	734 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	TSEN54	Q7Z6J9	526 aa	Known RBP	10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	ADCK1	Q86TW2	530 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	MCAT	Q8IVS2	390 aa	Known RBP	10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	OR4N5	Q8IXE1	308 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	CA13	Q8N1Q1	262 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	OR2L13	Q8N349	312 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	DNAJC22	Q8N4W6	341 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	CDRT4	Q8N9R6	151 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	CADM4	Q8NFZ8	388 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	OR6C4	Q8NGE1	309 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	GNPDA2	Q8TDQ7	276 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	GPR151	Q8TDV0	419 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	KLHL6	Q8WZ60	621 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	TCTN2	Q96GX1	697 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	SMIM10	Q96HG1	83 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	PLEKHA8	Q96JA3	519 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	DHRS1	Q96LJ7	313 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	HSPA12B	Q96MM6	686 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	SLC38A2	Q96QD8	506 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	DOK1	Q99704	481 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	ARHGDIG	Q99819	225 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	FUNDC2	Q9BWH2	189 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	FOXQ1	Q9C009	403 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	DUSP21	Q9H596	190 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	UCK1	Q9HA47	277 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	PLCXD1	Q9NUJ7	323 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	EVA1B	Q9NVM1	165 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	EPHA6	Q9UF33	1036 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	ZNF443	Q9Y2A4	671 aa	Predicted RBP	10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	PCDHGB1	Q9Y5G3	927 aa		10.08	□□□□□ -0.8
SPIDR-222	ENST00000524006	ACACB	O00763	2458 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006		A0A1W2PPW3	197 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	IRGM	A1A4Y4	181 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	HYKK	A2RU49	373 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	TLCD2	A6NGC4	264 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	PRAMEF25	A6NGN4	478 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	SLC9B1P1	A6NJY1	282 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	CPSF4L	A6NMK7	179 aa	Known RBP	10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	ZAR1L	A6NP61	321 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	WASHC1	A8K0Z3	465 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	CLCA1	A8K7I4	914 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	FAM227A	F5H4B4	570 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	SGK494	L7N484	410 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	CLDN4	O14493	209 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	AQP9	O43315	295 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	TPST2	O60704	377 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	LDB3	O75112	727 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	STX11	O75558	287 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	INMT	O95050	263 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	SOX14	O95416	240 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	GAST	P01350	101 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	ATP1B1	P05026	303 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	DBI	P07108	87 aa	Known RBP	10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	HTR1A	P08908	422 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	IFI6	P09912	130 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	SP9	P0CG40	484 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	CHM	P24386	653 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	PCSK6	P29122	969 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	EPHA2	P29317	976 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	CNR2	P34972	360 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	FASLG	P48023	281 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	CLK1	P49759	484 aa	Known RBP	10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	NUDT6	P53370	316 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	POU6F2	P78424	691 aa	Predicted RBP	10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	EMX1	Q04741	257 aa	Predicted RBP	10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	CHRNE	Q04844	493 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	FUT5	Q11128	374 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	COX10	Q12887	443 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	NFATC3	Q12968	1075 aa		10.07	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms