RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 TMEM41AQ96HV5 264 aa11.8□□□□□ -0.52
HDAC1-209ENST00000484305 C3orf30Q96M34 536 aa11.8□□□□□ -0.52
HDAC1-209ENST00000484305 ZIM3Q96PE6 472 aa11.8□□□□□ -0.52
HDAC1-209ENST00000484305 TSSK3Q96PN8 268 aa11.8□□□□□ -0.52
HDAC1-209ENST00000484305 STMN4Q9H169 189 aaPredicted RBP11.8□□□□□ -0.52
HDAC1-209ENST00000484305 UBQLN3Q9H347 655 aa11.8□□□□□ -0.52
HDAC1-209ENST00000484305 CENPHQ9H3R5 247 aa11.8□□□□□ -0.52
HDAC1-209ENST00000484305 GALNT9Q9HCQ5 603 aa11.8□□□□□ -0.52
HDAC1-209ENST00000484305 TAS2R9Q9NYW1 312 aa11.8□□□□□ -0.52
HDAC1-209ENST00000484305 C19orf53Q9UNZ5 99 aaPredicted RBP11.8□□□□□ -0.52
HDAC1-209ENST00000484305 C15orf41Q9Y2V0 281 aa11.8□□□□□ -0.52
HDAC1-209ENST00000484305 PKDREJQ9NTG1 2253 aa11.8□□□□□ -0.52
HDAC1-209ENST00000484305 MED12Q93074 2177 aa11.79□□□□□ -0.52
HDAC1-209ENST00000484305 WDR91A4D1P6 747 aa11.79□□□□□ -0.52
HDAC1-209ENST00000484305 OR6C70A6NIJ9 312 aa11.79□□□□□ -0.52
HDAC1-209ENST00000484305 C19orf84I3L1E1 186 aa11.79□□□□□ -0.52
HDAC1-209ENST00000484305 PLOD2O00469 737 aa11.79□□□□□ -0.52
HDAC1-209ENST00000484305 GNB5O14775 395 aa11.79□□□□□ -0.52
HDAC1-209ENST00000484305 ITM2AO43736 263 aa11.79□□□□□ -0.52
HDAC1-209ENST00000484305 TSPAN2O60636 221 aa11.79□□□□□ -0.52
HDAC1-209ENST00000484305 PEX11AO75192 247 aa11.79□□□□□ -0.52
HDAC1-209ENST00000484305 LYPLA1O75608 230 aaPredicted RBP11.79□□□□□ -0.52
HDAC1-209ENST00000484305 TRAPPC6AO75865 159 aa11.79□□□□□ -0.52
HDAC1-209ENST00000484305 PSMG1O95456 288 aa11.79□□□□□ -0.52
HDAC1-209ENST00000484305 TUBBP07437 444 aa11.79□□□□□ -0.52
HDAC1-209ENST00000484305 BCKDHAP12694 445 aa11.79□□□□□ -0.52
HDAC1-209ENST00000484305 ACVR2AP27037 513 aa11.79□□□□□ -0.52
HDAC1-209ENST00000484305 SERPINB4P48594 390 aa11.79□□□□□ -0.52
HDAC1-209ENST00000484305 PSG6Q00889 435 aa11.79□□□□□ -0.52
HDAC1-209ENST00000484305 ZNF155Q12901 538 aaPredicted RBP11.79□□□□□ -0.52
HDAC1-209ENST00000484305 MPP2Q14168 576 aa11.79□□□□□ -0.52
HDAC1-209ENST00000484305 ZNF385BQ569K4 471 aa11.79□□□□□ -0.52
HDAC1-209ENST00000484305 XKR7Q5GH72 579 aa11.79□□□□□ -0.52
HDAC1-209ENST00000484305 TIGD3Q6B0B8 471 aa11.79□□□□□ -0.52
HDAC1-209ENST00000484305 RTL6Q6ICC9 239 aa11.79□□□□□ -0.52
HDAC1-209ENST00000484305 SLC30A6Q6NXT4 461 aa11.79□□□□□ -0.52
HDAC1-209ENST00000484305 ANGPTL8Q6UXH0 198 aa11.79□□□□□ -0.52
HDAC1-209ENST00000484305 ZNF551Q7Z340 670 aaPredicted RBP11.79□□□□□ -0.52
HDAC1-209ENST00000484305 WDR53Q7Z5U6 358 aaPredicted RBP11.79□□□□□ -0.52
HDAC1-209ENST00000484305 OR2L13Q8N349 312 aa11.79□□□□□ -0.52
HDAC1-209ENST00000484305 OR1J4Q8NGS1 313 aa11.79□□□□□ -0.52
HDAC1-209ENST00000484305 MARVELD3Q96A59 401 aa11.79□□□□□ -0.52
HDAC1-209ENST00000484305 ELP4Q96EB1 424 aa11.79□□□□□ -0.52
HDAC1-209ENST00000484305 ZNF764Q96H86 408 aaPredicted RBP11.79□□□□□ -0.52
HDAC1-209ENST00000484305 COL21A1Q96P44 957 aa11.79□□□□□ -0.52
HDAC1-209ENST00000484305 ADOQ96SZ5 270 aa11.79□□□□□ -0.52
HDAC1-209ENST00000484305 OSBPL11Q9BXB4 747 aa11.79□□□□□ -0.52
HDAC1-209ENST00000484305 REEP4Q9H6H4 257 aa11.79□□□□□ -0.52
HDAC1-209ENST00000484305 ZNF395Q9H8N7 513 aaPredicted RBP11.79□□□□□ -0.52
HDAC1-209ENST00000484305 SSU72Q9NP77 194 aaKnown RBP11.79□□□□□ -0.52
HDAC1-209ENST00000484305 ALKBH4Q9NXW9 302 aa11.79□□□□□ -0.52
HDAC1-209ENST00000484305 KLRF1Q9NZS2 232 aa11.79□□□□□ -0.52
HDAC1-209ENST00000484305 TMED5Q9Y3A6 229 aa11.79□□□□□ -0.52
HDAC1-209ENST00000484305 FAM215AQ9Y5M1 114 aa11.79□□□□□ -0.52
HDAC1-209ENST00000484305 HCFC1P51610 2035 aa11.79□□□□□ -0.52
HDAC1-209ENST00000484305 PCNX3Q9H6A9 2034 aa11.78□□□□□ -0.52
HDAC1-209ENST00000484305 PRAMEF25A6NGN4 478 aa11.78□□□□□ -0.52
HDAC1-209ENST00000484305 FIGNL2A6NMB9 653 aa11.78□□□□□ -0.52
HDAC1-209ENST00000484305 PDPK1O15530 556 aa11.78□□□□□ -0.52
HDAC1-209ENST00000484305 HNRNPRO43390 633 aaKnown RBP11.78□□□□□ -0.52
HDAC1-209ENST00000484305 TBX19O60806 448 aa11.78□□□□□ -0.52
HDAC1-209ENST00000484305 COQ9O75208 318 aa11.78□□□□□ -0.52
HDAC1-209ENST00000484305 SKAP2O75563 359 aaPredicted RBP11.78□□□□□ -0.52
HDAC1-209ENST00000484305 SLITRK5O94991 958 aa11.78□□□□□ -0.52
HDAC1-209ENST00000484305 HPNP05981 417 aa11.78□□□□□ -0.52
HDAC1-209ENST00000484305 PTPN6P29350 595 aa11.78□□□□□ -0.52
HDAC1-209ENST00000484305 CDK9P50750 372 aaKnown RBP11.78□□□□□ -0.52
HDAC1-209ENST00000484305 NUP107P57740 925 aa11.78□□□□□ -0.52
HDAC1-209ENST00000484305 HSPB3Q12988 150 aa11.78□□□□□ -0.52
HDAC1-209ENST00000484305 SNTA1Q13424 505 aa11.78□□□□□ -0.52
HDAC1-209ENST00000484305 PDE7AQ13946 482 aa11.78□□□□□ -0.52
HDAC1-209ENST00000484305 WLSQ5T9L3 541 aa11.78□□□□□ -0.52
HDAC1-209ENST00000484305 LARP4Q71RC2 724 aaKnown RBP eCLIP11.78□□□□□ -0.52
HDAC1-209ENST00000484305 HOMEZQ8IX15 550 aa11.78□□□□□ -0.52
HDAC1-209ENST00000484305 LIX1Q8N485 282 aa11.78□□□□□ -0.52
HDAC1-209ENST00000484305 WDSUB1Q8N9V3 476 aa11.78□□□□□ -0.52
HDAC1-209ENST00000484305 PPP1R14CQ8TAE6 165 aa11.78□□□□□ -0.52
HDAC1-209ENST00000484305 CA5BP1Q8WTZ4 195 aa11.78□□□□□ -0.52
HDAC1-209ENST00000484305 RND1Q92730 232 aa11.78□□□□□ -0.52
HDAC1-209ENST00000484305 EFHD2Q96C19 240 aaPredicted RBP11.78□□□□□ -0.52
HDAC1-209ENST00000484305 PPCDCQ96CD2 204 aa11.78□□□□□ -0.52
HDAC1-209ENST00000484305 TMCO6Q96DC7 493 aa11.78□□□□□ -0.52
HDAC1-209ENST00000484305 SLC35A4Q96G79 324 aa11.78□□□□□ -0.52
HDAC1-209ENST00000484305 PPP3R2Q96LZ3 170 aa11.78□□□□□ -0.52
HDAC1-209ENST00000484305 TTYH2Q9BSA4 534 aa11.78□□□□□ -0.52
HDAC1-209ENST00000484305 CHST11Q9NPF2 352 aa11.78□□□□□ -0.52
HDAC1-209ENST00000484305 DDX18Q9NVP1 670 aaKnown RBP11.78□□□□□ -0.52
HDAC1-209ENST00000484305 COQ3Q9NZJ6 369 aa11.78□□□□□ -0.52
HDAC1-209ENST00000484305 SH3BP4Q9P0V3 963 aa11.78□□□□□ -0.52
HDAC1-209ENST00000484305 RNF6Q9Y252 685 aa11.78□□□□□ -0.52
HDAC1-209ENST00000484305 OR10H1Q9Y4A9 318 aa11.78□□□□□ -0.52
HDAC1-209ENST00000484305 NUP214P35658 2090 aaPredicted RBP11.78□□□□□ -0.52
HDAC1-209ENST00000484305 TEX15Q9BXT5 2789 aa11.78□□□□□ -0.52
HDAC1-209ENST00000484305 C15orf38-AP3S2A0A0A6YYH1 394 aa11.77□□□□□ -0.53
HDAC1-209ENST00000484305 SNPHO15079 494 aa11.77□□□□□ -0.53
HDAC1-209ENST00000484305 TM9SF1O15321 606 aa11.77□□□□□ -0.53
HDAC1-209ENST00000484305 BIRC5O15392 142 aa11.77□□□□□ -0.53
HDAC1-209ENST00000484305 WDR1O75083 606 aa11.77□□□□□ -0.53
HDAC1-209ENST00000484305 HSPA4LO95757 839 aa11.77□□□□□ -0.53
HDAC1-209ENST00000484305 SNRPB2P08579 225 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms