RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 ACSL6Q9UKU0 697 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 HS3ST4Q9Y661 456 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 PTCH2Q9Y6C5 1203 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 SRCAPQ6ZRS2 3230 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 C2orf92A0A1B0GVN3 265 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 IQCF5A8MTL0 148 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 GPR182O15218 404 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 YY2O15391 372 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 RECQL4O94761 1208 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 IFNW1P05000 195 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 ALPIP09923 528 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 LIMS3P0CW19 117 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 LIMS4P0CW20 117 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 IFNGR1P15260 489 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 AKAP5P24588 427 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 MC4RP32245 332 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 THBS2P35442 1172 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 BACE1P56817 501 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 TNFRSF17Q02223 184 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 SNTB1Q13884 538 aaKnown RBP13.05□□□□□ -0.32
HDAC1-206ENST00000476391 FAM69AQ5T7M9 428 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 ALG1LQ6GMV1 187 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 STX12Q86Y82 276 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 CPXM2Q8N436 756 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 DUSP26Q9BV47 211 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 FAIM2Q9BWQ8 316 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 APOL5Q9BWW9 433 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 NANSQ9NR45 359 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 SLC22A11Q9NSA0 550 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 TRBV4-1A0A0J9YWV2 114 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 SMIM28A0A1B0GU29 152 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 FAM227AF5H4B4 570 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 ARPC5O15511 151 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 PRODHO43272 600 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 STK16O75716 305 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 ARIH2O95376 493 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 URODP06132 367 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 CELP19835 753 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 DRD5P21918 477 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 PTAFRP25105 342 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 MST1P26927 711 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 VIPR1P32241 457 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 CRATP43155 626 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 BCL2L1Q07817 233 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 KLF9Q13886 244 aaPredicted RBP13.04□□□□□ -0.32
HDAC1-206ENST00000476391 GCNT6Q5T4J0 391 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 WSCD1Q658N2 575 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 KIAA1211LQ6NV74 962 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 B3GLCTQ6Y288 498 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 NR2C2APQ86WQ0 139 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 PUSL1Q8N0Z8 303 aaKnown RBP13.04□□□□□ -0.32
HDAC1-206ENST00000476391 SLC44A3Q8N4M1 653 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 OR10K1Q8NGX5 313 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 OR6K3Q8NGY3 331 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 OR14A16Q8NHC5 309 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 FGF11Q92914 225 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 RNFT2Q96EX2 444 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 SMARCD1Q96GM5 515 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 SPATA33Q96N06 139 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 P2RY12Q9H244 342 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 TMEM38AQ9H6F2 299 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 NTMQ9P121 344 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 RHCGQ9UBD6 479 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 PCDHB1Q9Y5F3 818 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 SERTM1A2A2V5 107 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 GREM1O60565 184 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 MT-ND4P03905 459 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 FBP1P09467 338 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 LAMP1P11279 417 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 INSRRP14616 1297 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 RHOQP17081 205 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 PSMA6P60900 246 aaKnown RBP13.04□□□□□ -0.32
HDAC1-206ENST00000476391 ZXDBP98169 803 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 EFNB1P98172 346 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 GAB1Q13480 694 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 OR5M10Q6IEU7 315 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 LRRN1Q6UXK5 716 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 SKA3Q8IX90 412 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 OR6V1Q8N148 313 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 ARMC10Q8N2F6 343 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 L3MBTL4Q8NA19 623 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 FAM98AQ8NCA5 519 aaKnown RBP13.04□□□□□ -0.32
HDAC1-206ENST00000476391 C2CD4CQ8TF44 421 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 EDARADDQ8WWZ3 215 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 BARX1Q9HBU1 254 aaPredicted RBP13.04□□□□□ -0.32
HDAC1-206ENST00000476391 TRPM7Q96QT4 1865 aa13.04□□□□□ -0.32
HDAC1-206ENST00000476391 LRRC72A6NJI9 287 aa13.03□□□□□ -0.32
HDAC1-206ENST00000476391 CD8B2A6NJW9 211 aa13.03□□□□□ -0.32
HDAC1-206ENST00000476391 FAAHO00519 579 aa13.03□□□□□ -0.32
HDAC1-206ENST00000476391 OR10H3O60404 316 aa13.03□□□□□ -0.32
HDAC1-206ENST00000476391 GJB3O75712 270 aa13.03□□□□□ -0.32
HDAC1-206ENST00000476391 CDC123O75794 336 aaPredicted RBP13.03□□□□□ -0.32
HDAC1-206ENST00000476391 RECKO95980 971 aa13.03□□□□□ -0.32
HDAC1-206ENST00000476391 CRYBA1P05813 215 aa13.03□□□□□ -0.32
HDAC1-206ENST00000476391 ANKRD34CP0C6C1 535 aa13.03□□□□□ -0.32
HDAC1-206ENST00000476391 CD8BP10966 210 aa13.03□□□□□ -0.32
HDAC1-206ENST00000476391 HSD3B1P14060 373 aa13.03□□□□□ -0.32
HDAC1-206ENST00000476391 SOX18P35713 384 aa13.03□□□□□ -0.32
HDAC1-206ENST00000476391 DGKGP49619 791 aa13.03□□□□□ -0.32
HDAC1-206ENST00000476391 LRRC74AQ0VAA2 488 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms