RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	NXF5	Q9H1B4	397 aa	Known RBP	11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	ATAD3A	Q9NVI7	634 aa		11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	TAS2R9	Q9NYW1	312 aa		11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	OR10H1	Q9Y4A9	318 aa		11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	SNX8	Q9Y5X2	465 aa		11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	CCDC168	Q8NDH2	2452 aa		11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	HCFC1	P51610	2035 aa		11.69	□□□□□ -0.54
FDPS-204	ENST00000461507		A0A0G2JMM0	328 aa		11.68	□□□□□ -0.54
FDPS-204	ENST00000461507		A0A1W2PPB8	328 aa		11.68	□□□□□ -0.54
FDPS-204	ENST00000461507		A0A1W2PRS3	328 aa		11.68	□□□□□ -0.54
FDPS-204	ENST00000461507	PINLYP	A6NC86	204 aa		11.68	□□□□□ -0.54
FDPS-204	ENST00000461507	FAM166B	A8MTA8	275 aa		11.68	□□□□□ -0.54
FDPS-204	ENST00000461507	KIR3DP1	A8MWS1	328 aa		11.68	□□□□□ -0.54
FDPS-204	ENST00000461507	ACOT7	O00154	380 aa		11.68	□□□□□ -0.54
FDPS-204	ENST00000461507	TP53I11	O14683	189 aa		11.68	□□□□□ -0.54
FDPS-204	ENST00000461507	HDAC3	O15379	428 aa		11.68	□□□□□ -0.54
FDPS-204	ENST00000461507	ZNF354A	O60765	605 aa	Predicted RBP	11.68	□□□□□ -0.54
FDPS-204	ENST00000461507	DIAPH2	O60879	1101 aa		11.68	□□□□□ -0.54
FDPS-204	ENST00000461507	SNN	O75324	88 aa	Predicted RBP	11.68	□□□□□ -0.54
FDPS-204	ENST00000461507	ERN1	O75460	977 aa	Known RBP	11.68	□□□□□ -0.54
FDPS-204	ENST00000461507	NADK	O95544	446 aa	Predicted RBP	11.68	□□□□□ -0.54
FDPS-204	ENST00000461507	IGHG3	P01860	377 aa		11.68	□□□□□ -0.54
FDPS-204	ENST00000461507	ABCB1	P08183	1280 aa	Predicted RBP	11.68	□□□□□ -0.54
FDPS-204	ENST00000461507	CCL3	P10147	92 aa		11.68	□□□□□ -0.54
FDPS-204	ENST00000461507	EPHA3	P29320	983 aa		11.68	□□□□□ -0.54
FDPS-204	ENST00000461507	IL12B	P29460	328 aa		11.68	□□□□□ -0.54
FDPS-204	ENST00000461507	DNASE1L1	P49184	302 aa		11.68	□□□□□ -0.54
FDPS-204	ENST00000461507	FBXW4	P57775	412 aa		11.68	□□□□□ -0.54
FDPS-204	ENST00000461507	EMX2	Q04743	252 aa		11.68	□□□□□ -0.54
FDPS-204	ENST00000461507	MGAT2	Q10469	447 aa		11.68	□□□□□ -0.54
FDPS-204	ENST00000461507	DUSP8	Q13202	625 aa		11.68	□□□□□ -0.54
FDPS-204	ENST00000461507	ZNHIT3	Q15649	155 aa	Predicted RBP	11.68	□□□□□ -0.54
FDPS-204	ENST00000461507	EMC4	Q5J8M3	183 aa		11.68	□□□□□ -0.54
FDPS-204	ENST00000461507	GK5	Q6ZS86	529 aa		11.68	□□□□□ -0.54
FDPS-204	ENST00000461507	ZNF295-AS1	Q8N0V1	137 aa		11.68	□□□□□ -0.54
FDPS-204	ENST00000461507	SLC15A4	Q8N697	577 aa		11.68	□□□□□ -0.54
FDPS-204	ENST00000461507	KRTCAP2	Q8N6L1	136 aa		11.68	□□□□□ -0.54
FDPS-204	ENST00000461507	OR52N2	Q8NGI0	321 aa		11.68	□□□□□ -0.54
FDPS-204	ENST00000461507	FBXO30	Q8TB52	745 aa		11.68	□□□□□ -0.54
FDPS-204	ENST00000461507	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	11.68	□□□□□ -0.54
FDPS-204	ENST00000461507	JADE3	Q92613	823 aa		11.68	□□□□□ -0.54
FDPS-204	ENST00000461507	DIO2	Q92813	273 aa		11.68	□□□□□ -0.54
FDPS-204	ENST00000461507	LCOR	Q96JN0	433 aa	Predicted RBP	11.68	□□□□□ -0.54
FDPS-204	ENST00000461507	TTTY12	Q9BZ98	90 aa		11.68	□□□□□ -0.54
FDPS-204	ENST00000461507	TP63	Q9H3D4	680 aa	Predicted RBP	11.68	□□□□□ -0.54
FDPS-204	ENST00000461507	WDR55	Q9H6Y2	383 aa	Predicted RBP	11.68	□□□□□ -0.54
FDPS-204	ENST00000461507	FOLH1B	Q9HBA9	442 aa		11.68	□□□□□ -0.54
FDPS-204	ENST00000461507	SH2D2A	Q9NP31	389 aa		11.68	□□□□□ -0.54
FDPS-204	ENST00000461507	EXO1	Q9UQ84	846 aa	Known RBP	11.68	□□□□□ -0.54
FDPS-204	ENST00000461507	HRH3	Q9Y5N1	445 aa		11.68	□□□□□ -0.54
FDPS-204	ENST00000461507	NPFFR2	Q9Y5X5	522 aa		11.68	□□□□□ -0.54
FDPS-204	ENST00000461507	EXPH5	Q8NEV8	1989 aa		11.68	□□□□□ -0.54
FDPS-204	ENST00000461507	TEP1	Q99973	2627 aa	Known RBP	11.67	□□□□□ -0.54
FDPS-204	ENST00000461507	SLCO1B7	G3V0H7	640 aa		11.67	□□□□□ -0.54
FDPS-204	ENST00000461507	REM1	O75628	298 aa		11.67	□□□□□ -0.54
FDPS-204	ENST00000461507	TPO	P07202	933 aa		11.67	□□□□□ -0.54
FDPS-204	ENST00000461507	FBXO45	P0C2W1	286 aa		11.67	□□□□□ -0.54
FDPS-204	ENST00000461507	IGFBP2	P18065	325 aa		11.67	□□□□□ -0.54
FDPS-204	ENST00000461507	PRPS1L1	P21108	318 aa		11.67	□□□□□ -0.54
FDPS-204	ENST00000461507	S1PR1	P21453	382 aa		11.67	□□□□□ -0.54
FDPS-204	ENST00000461507	PIGA	P37287	484 aa		11.67	□□□□□ -0.54
FDPS-204	ENST00000461507	KIR3DL1	P43629	444 aa		11.67	□□□□□ -0.54
FDPS-204	ENST00000461507	MASP1	P48740	699 aa		11.67	□□□□□ -0.54
FDPS-204	ENST00000461507	CDK9	P50750	372 aa	Known RBP	11.67	□□□□□ -0.54
FDPS-204	ENST00000461507	DIO3	P55073	304 aa		11.67	□□□□□ -0.54
FDPS-204	ENST00000461507	CORO7	P57737	925 aa		11.67	□□□□□ -0.54
FDPS-204	ENST00000461507	DCAF7	P61962	342 aa		11.67	□□□□□ -0.54
FDPS-204	ENST00000461507	RPP38	P78345	283 aa	Known RBP	11.67	□□□□□ -0.54
FDPS-204	ENST00000461507	OCRL	Q01968	901 aa		11.67	□□□□□ -0.54
FDPS-204	ENST00000461507	FOXO1	Q12778	655 aa		11.67	□□□□□ -0.54
FDPS-204	ENST00000461507	RPS6KA2	Q15349	733 aa		11.67	□□□□□ -0.54
FDPS-204	ENST00000461507	SLC22A10	Q63ZE4	541 aa		11.67	□□□□□ -0.54
FDPS-204	ENST00000461507	LYPD8	Q6UX82	237 aa		11.67	□□□□□ -0.54
FDPS-204	ENST00000461507	WDR53	Q7Z5U6	358 aa	Predicted RBP	11.67	□□□□□ -0.54
FDPS-204	ENST00000461507	WDR75	Q8IWA0	830 aa	Known RBP	11.67	□□□□□ -0.54
FDPS-204	ENST00000461507	SLC44A2	Q8IWA5	706 aa	Predicted RBP	11.67	□□□□□ -0.54
FDPS-204	ENST00000461507	DND1	Q8IYX4	353 aa	Known RBP	11.67	□□□□□ -0.54
FDPS-204	ENST00000461507	PIWIL2	Q8TC59	973 aa	Known RBP	11.67	□□□□□ -0.54
FDPS-204	ENST00000461507	NUDT8	Q8WV74	236 aa		11.67	□□□□□ -0.54
FDPS-204	ENST00000461507	TP53INP1	Q96A56	240 aa		11.67	□□□□□ -0.54
FDPS-204	ENST00000461507	MTERF3	Q96E29	417 aa		11.67	□□□□□ -0.54
FDPS-204	ENST00000461507	OMA1	Q96E52	524 aa		11.67	□□□□□ -0.54
FDPS-204	ENST00000461507	C14orf79	Q96F83	325 aa		11.67	□□□□□ -0.54
FDPS-204	ENST00000461507	MARK4	Q96L34	752 aa		11.67	□□□□□ -0.54
FDPS-204	ENST00000461507	LURAP1	Q96LR2	239 aa		11.67	□□□□□ -0.54
FDPS-204	ENST00000461507	FAM173A	Q9BQD7	235 aa		11.67	□□□□□ -0.54
FDPS-204	ENST00000461507	DOHH	Q9BU89	302 aa		11.67	□□□□□ -0.54
FDPS-204	ENST00000461507	METTL7A	Q9H8H3	244 aa		11.67	□□□□□ -0.54
FDPS-204	ENST00000461507	MEAF6	Q9HAF1	191 aa		11.67	□□□□□ -0.54
FDPS-204	ENST00000461507	ZNF639	Q9UID6	485 aa		11.67	□□□□□ -0.54
FDPS-204	ENST00000461507	HAO1	Q9UJM8	370 aa		11.67	□□□□□ -0.54
FDPS-204	ENST00000461507	F8	P00451	2351 aa		11.67	□□□□□ -0.54
FDPS-204	ENST00000461507	INTS1	Q8N201	2190 aa	Known RBP	11.67	□□□□□ -0.54
FDPS-204	ENST00000461507	CSMD2	Q7Z408	3487 aa		11.66	□□□□□ -0.54
FDPS-204	ENST00000461507	DCHS2	Q6V1P9	2916 aa		11.66	□□□□□ -0.54
FDPS-204	ENST00000461507		A0A1B0GVC2	190 aa		11.66	□□□□□ -0.54
FDPS-204	ENST00000461507		A0A1W2PRB8	838 aa		11.66	□□□□□ -0.54
FDPS-204	ENST00000461507	OR14I1	A6ND48	311 aa		11.66	□□□□□ -0.54
FDPS-204	ENST00000461507	FRG2C	A6NGY1	282 aa		11.66	□□□□□ -0.54
FDPS-204	ENST00000461507	SDHD	O14521	159 aa		11.66	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms