RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 LRRC49Q8IUZ0 686 aa4.57□□□□□ -1.68
SBDSP1-204ENST00000453858 ATPAF2Q8N5M1 289 aa4.57□□□□□ -1.68
SBDSP1-204ENST00000453858 LINC00301Q8NCQ3 95 aa4.57□□□□□ -1.68
SBDSP1-204ENST00000453858 TBC1D15Q8TC07 691 aa4.57□□□□□ -1.68
SBDSP1-204ENST00000453858 NSMCE1Q8WV22 266 aa4.57□□□□□ -1.68
SBDSP1-204ENST00000453858 NCLNQ969V3 563 aa4.57□□□□□ -1.68
SBDSP1-204ENST00000453858 SLC25A28Q96A46 364 aa4.57□□□□□ -1.68
SBDSP1-204ENST00000453858 PHF21AQ96BD5 680 aa4.57□□□□□ -1.68
SBDSP1-204ENST00000453858 S100PBPQ96BU1 408 aa4.57□□□□□ -1.68
SBDSP1-204ENST00000453858 TM4SF19Q96DZ7 209 aa4.57□□□□□ -1.68
SBDSP1-204ENST00000453858 FAHD2AQ96GK7 314 aa4.57□□□□□ -1.68
SBDSP1-204ENST00000453858 TSGA13Q96PP4 275 aa4.57□□□□□ -1.68
SBDSP1-204ENST00000453858 SORCS2Q96PQ0 1159 aa4.57□□□□□ -1.68
SBDSP1-204ENST00000453858 MACROD1Q9BQ69 325 aa4.57□□□□□ -1.68
SBDSP1-204ENST00000453858 KRTAP3-1Q9BYR8 98 aa4.57□□□□□ -1.68
SBDSP1-204ENST00000453858 RNF122Q9H9V4 155 aa4.57□□□□□ -1.68
SBDSP1-204ENST00000453858 DNAJC11Q9NVH1 559 aa4.57□□□□□ -1.68
SBDSP1-204ENST00000453858 OPN4Q9UHM6 478 aa4.57□□□□□ -1.68
SBDSP1-204ENST00000453858 CORO1CQ9ULV4 474 aaPredicted RBP4.57□□□□□ -1.68
SBDSP1-204ENST00000453858 GRIP1Q9Y3R0 1128 aa4.57□□□□□ -1.68
SBDSP1-204ENST00000453858 CHST2Q9Y4C5 530 aa4.57□□□□□ -1.68
SBDSP1-204ENST00000453858 HMCN2Q8NDA2 5059 aa4.57□□□□□ -1.68
SBDSP1-204ENST00000453858 APOBP04114 4563 aaKnown RBP4.57□□□□□ -1.68
SBDSP1-204ENST00000453858 NPIPA5A0A0B4J1W7 369 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 CDHR4A6H8M9 788 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 NPIPA7E9PJI5 369 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 LIN7AO14910 233 aaPredicted RBP4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 BUD23O43709 281 aaKnown RBP4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 GFPT2O94808 682 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 NDUFA7O95182 113 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 PNPP00491 289 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 MSMBP08118 114 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 SBK3P0C264 359 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 NPIPA8P0DM63 369 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 LYL1P12980 280 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 IL1RNP18510 177 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 RHCEP18577 417 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 PGCP20142 388 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 PPP2R1BP30154 601 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 APOBEC3AP31941 199 aaPredicted RBP4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 STARP49675 285 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 CLDN18P56856 261 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 GSCP56915 257 aaPredicted RBP4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 SIRPAP78324 504 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 SRYQ05066 204 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 TBL3Q12788 808 aaKnown RBP4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 BMPR2Q13873 1038 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 RUNX2Q13950 521 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 NAA25Q14CX7 972 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 TSC22D1Q15714 1073 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 NDUFA9Q16795 377 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 MPEG1Q2M385 716 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 EXOC3L2Q2M3D2 409 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 C2orf68Q2NKX9 166 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 CTU2Q2VPK5 515 aaKnown RBP4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 NRN1LQ496H8 165 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 ZNF362Q5T0B9 420 aaPredicted RBP4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 RNF220Q5VTB9 566 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 NAA35Q5VZE5 725 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 SAXO2Q658L1 398 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 ADNP2Q6IQ32 1131 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 DPY19L2P1Q6NXN4 242 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 C16orf87Q6PH81 154 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 TRIM65Q6PJ69 517 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 OPN5Q6U736 354 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 ENPP6Q6UWR7 440 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 B3GLCTQ6Y288 498 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 GRAMD2AQ8IUY3 354 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 CLDN19Q8N6F1 224 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 TEX29Q8N6K0 151 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 HSD17B8Q92506 261 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 IMP4Q96G21 291 aaKnown RBP4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 BOD1Q96IK1 185 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 SNRNP25Q9BV90 132 aaKnown RBP4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 RACGAP1Q9H0H5 632 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 NUP62CLQ9H1M0 184 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 TRABDQ9H4I3 376 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 MYOZ1Q9NP98 299 aaPredicted RBP4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 EIF2B3Q9NR50 452 aaKnown RBP4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 WWOXQ9NZC7 414 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 CNIH4Q9P003 139 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 DLGAP4Q9Y2H0 992 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 C15orf41Q9Y2V0 281 aa4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.56□□□□□ -1.68
SBDSP1-204ENST00000453858 KCNE1BA0A087WTH5 132 aa4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 LOC285095A0A1B0GVY8 99 aa4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 H0Y3Z8 333 aa4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 MYO1FO00160 1098 aa4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 CHST10O43529 356 aa4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 VPS26AO75436 327 aa4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 SRP72O76094 671 aaKnown RBP4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 NDST3O95803 873 aa4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 CSF1P09603 554 aa4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 KHKP50053 298 aa4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 ZNF135P52742 658 aaPredicted RBP4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 TNFRSF17Q02223 184 aa4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 PPIDQ08752 370 aaKnown RBP4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 BAMBIQ13145 260 aa4.55□□□□□ -1.68
SBDSP1-204ENST00000453858 CNN3Q15417 329 aaKnown RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms