RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 NAA25Q14CX7 972 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 HERC3Q15034 1050 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 GSTA3Q16772 222 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 HIST2H2ACQ16777 129 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 GGTA1PQ4G0N0 100 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 AGKQ53H12 422 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 SGO1Q5FBB7 561 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 XKR6Q5GH73 641 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 PAGE2BQ5JRK9 111 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 TMEM31Q5JXX7 168 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 TCHHL1Q5QJ38 904 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 TMEM198Q66K66 360 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 HIST2H2AA3Q6FI13 130 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 HEPHL1Q6MZM0 1159 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 DUS1LQ6P1R4 473 aaKnown RBP3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 PGBD2Q6P3X8 592 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 RINLQ6ZS11 566 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 Q6ZSV7 163 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 Q6ZTC4 211 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 LPCAT2Q7L5N7 544 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 RAB11FIP2Q7L804 512 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 SYT13Q7L8C5 426 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 THOC6Q86W42 341 aaKnown RBP3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 LONP2Q86WA8 852 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 ZNF547Q8IVP9 402 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 PPFIBP2Q8ND30 876 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 OR1N1Q8NGS0 311 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 OR9A1PQ8NGU1 263 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 SVIPQ8NHG7 77 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 TFGQ92734 400 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 STMN2Q93045 179 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 FAM131CQ96AQ9 280 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 SH3KBP1Q96B97 665 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 C3orf49Q96BT1 292 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 RCN3Q96D15 328 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 PDXPQ96GD0 296 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 HBEGFQ99075 208 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 PKP4Q99569 1192 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 SERPINI1Q99574 410 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 C1orf50Q9BV19 199 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 SLC25A23Q9BV35 468 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 NTMT1Q9BV86 223 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 GPR174Q9BXC1 333 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 C6orf106Q9H6K1 298 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 TBC1D17Q9HA65 648 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 SLC40A1Q9NP59 571 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 MRPL40Q9NQ50 206 aaKnown RBP3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 IMP3Q9NV31 184 aaKnown RBP3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 CCDC167Q9P0B6 97 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 BAG5Q9UL15 447 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 ACSL5Q9ULC5 683 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 ZNF490Q9ULM2 529 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 PLAGL1Q9UM63 463 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 SUFUQ9UMX1 484 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 DAPP1Q9UN19 280 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 EIF3LQ9Y262 564 aaKnown RBP3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 SLC22A14Q9Y267 594 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 LRCH1Q9Y2L9 728 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 RNF11Q9Y3C5 154 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 PCDHGB1Q9Y5G3 927 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 HEBP2Q9Y5Z4 205 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 KCNE2Q9Y6J6 123 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 EML5Q05BV3 1969 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 DOCK9Q9BZ29 2069 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 MYO9BQ13459 2157 aa3.59□□□□□ -1.84
HMGB3P20-201ENST00000417997 LOC100653049A0A140TA62 436 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 MANBAO00462 879 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 MRASO14807 208 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 LATO43561 262 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 PI15O43692 258 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 SEC22BO75396 215 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 KRT34O76011 436 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 RSL1D1O76021 490 aaKnown RBP3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 CCNDBP1O95273 360 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 SLC16A8O95907 504 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 PDYNP01213 254 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 TNFP01375 233 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 IGLV3-19P01714 112 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 HOXC4P09017 264 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 HSD3B1P14060 373 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 CTSEP14091 401 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 SLC2A4P14672 509 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 GNAZP19086 355 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 ITGAXP20702 1163 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 TRIM23P36406 574 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 HSD17B2P37059 387 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 HNF4AP41235 474 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 ACTR1BP42025 376 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 CASP2P42575 452 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 PPM1FP49593 454 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 CCR5P51681 352 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 STARD6P59095 220 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 PFN3P60673 137 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 ACTR1AP61163 376 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 ABATP80404 500 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 HMGCS1Q01581 520 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 Q0VFX4 171 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 TBL3Q12788 808 aaKnown RBP3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 ILF3Q12906 894 aaKnown RBP eCLIP3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 CSTF3Q12996 717 aaKnown RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms