RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 OR6C70A6NIJ9 312 aa16.17■□□□□ 0.18
LSM5-204ENST00000409909 LSM1O15116 133 aaKnown RBP16.17■□□□□ 0.18
LSM5-204ENST00000409909 TYROBPO43914 113 aa16.17■□□□□ 0.18
LSM5-204ENST00000409909 TSPAN2O60636 221 aa16.17■□□□□ 0.18
LSM5-204ENST00000409909 WDR1O75083 606 aa16.17■□□□□ 0.18
LSM5-204ENST00000409909 REM1O75628 298 aa16.17■□□□□ 0.18
LSM5-204ENST00000409909 COX6B1P14854 86 aa16.17■□□□□ 0.18
LSM5-204ENST00000409909 PTPN6P29350 595 aa16.17■□□□□ 0.18
LSM5-204ENST00000409909 CHRNB4P30926 498 aa16.17■□□□□ 0.18
LSM5-204ENST00000409909 MC3RP41968 323 aa16.17■□□□□ 0.18
LSM5-204ENST00000409909 SNTA1Q13424 505 aa16.17■□□□□ 0.18
LSM5-204ENST00000409909 ANKRD26P1Q6NSI1 321 aa16.17■□□□□ 0.18
LSM5-204ENST00000409909 SLC30A6Q6NXT4 461 aa16.17■□□□□ 0.18
LSM5-204ENST00000409909 TMEM107Q6UX40 140 aa16.17■□□□□ 0.18
LSM5-204ENST00000409909 ANGPTL8Q6UXH0 198 aa16.17■□□□□ 0.18
LSM5-204ENST00000409909 B3GNT6Q6ZMB0 384 aa16.17■□□□□ 0.18
LSM5-204ENST00000409909 LIX1Q8N485 282 aa16.17■□□□□ 0.18
LSM5-204ENST00000409909 ACBD4Q8NC06 268 aa16.17■□□□□ 0.18
LSM5-204ENST00000409909 ASB5Q8WWX0 329 aa16.17■□□□□ 0.18
LSM5-204ENST00000409909 SLC35A4Q96G79 324 aa16.17■□□□□ 0.18
LSM5-204ENST00000409909 ADOQ96SZ5 270 aa16.17■□□□□ 0.18
LSM5-204ENST00000409909 OSBPL11Q9BXB4 747 aa16.17■□□□□ 0.18
LSM5-204ENST00000409909 STMN4Q9H169 189 aaPredicted RBP16.17■□□□□ 0.18
LSM5-204ENST00000409909 TAS2R9Q9NYW1 312 aa16.17■□□□□ 0.18
LSM5-204ENST00000409909 BAIAP2L1Q9UHR4 511 aa16.17■□□□□ 0.18
LSM5-204ENST00000409909 C19orf53Q9UNZ5 99 aaPredicted RBP16.17■□□□□ 0.18
LSM5-204ENST00000409909 NKX2-6A6NCS4 301 aa16.16■□□□□ 0.18
LSM5-204ENST00000409909 UPK1AO00322 258 aa16.16■□□□□ 0.18
LSM5-204ENST00000409909 PLOD2O00469 737 aa16.16■□□□□ 0.18
LSM5-204ENST00000409909 TOXO94900 526 aa16.16■□□□□ 0.18
LSM5-204ENST00000409909 PSMG1O95456 288 aa16.16■□□□□ 0.18
LSM5-204ENST00000409909 CHEK2O96017 543 aa16.16■□□□□ 0.18
LSM5-204ENST00000409909 SDC1P18827 310 aa16.16■□□□□ 0.18
LSM5-204ENST00000409909 ELAVL4P26378 380 aaKnown RBP16.16■□□□□ 0.18
LSM5-204ENST00000409909 ADH7P40394 386 aa16.16■□□□□ 0.18
LSM5-204ENST00000409909 ETV4P43268 484 aa16.16■□□□□ 0.18
LSM5-204ENST00000409909 PSG6Q00889 435 aa16.16■□□□□ 0.18
LSM5-204ENST00000409909 TFF3Q07654 80 aa16.16■□□□□ 0.18
LSM5-204ENST00000409909 CRYZQ08257 329 aaKnown RBP16.16■□□□□ 0.18
LSM5-204ENST00000409909 ZNF844Q08AG5 666 aa16.16■□□□□ 0.18
LSM5-204ENST00000409909 EIPR1Q53HC9 387 aa16.16■□□□□ 0.18
LSM5-204ENST00000409909 C1orf185Q5T7R7 199 aa16.16■□□□□ 0.18
LSM5-204ENST00000409909 SLC44A2Q8IWA5 706 aaPredicted RBP16.16■□□□□ 0.18
LSM5-204ENST00000409909 ULK2Q8IYT8 1036 aa16.16■□□□□ 0.18
LSM5-204ENST00000409909 ZNF295-AS1Q8N0V1 137 aa16.16■□□□□ 0.18
LSM5-204ENST00000409909 CLYBLQ8N0X4 340 aa16.16■□□□□ 0.18
LSM5-204ENST00000409909 OR2L13Q8N349 312 aa16.16■□□□□ 0.18
LSM5-204ENST00000409909 WDSUB1Q8N9V3 476 aa16.16■□□□□ 0.18
LSM5-204ENST00000409909 OR1J4Q8NGS1 313 aa16.16■□□□□ 0.18
LSM5-204ENST00000409909 OR6Y1Q8NGX8 325 aa16.16■□□□□ 0.18
LSM5-204ENST00000409909 TWIST2Q8WVJ9 160 aa16.16■□□□□ 0.18
LSM5-204ENST00000409909 ELP4Q96EB1 424 aa16.16■□□□□ 0.18
LSM5-204ENST00000409909 TIMP4Q99727 224 aa16.16■□□□□ 0.18
LSM5-204ENST00000409909 CCT7Q99832 543 aa16.16■□□□□ 0.18
LSM5-204ENST00000409909 TRIM8Q9BZR9 551 aa16.16■□□□□ 0.18
LSM5-204ENST00000409909 RUBCNLQ9H714 662 aa16.16■□□□□ 0.18
LSM5-204ENST00000409909 KLRF1Q9NZS2 232 aa16.16■□□□□ 0.18
LSM5-204ENST00000409909 SLC6A5Q9Y345 797 aa16.16■□□□□ 0.18
LSM5-204ENST00000409909 PCDHGB3Q9Y5G1 929 aa16.16■□□□□ 0.18
LSM5-204ENST00000409909 HCFC1P51610 2035 aa16.16■□□□□ 0.18
LSM5-204ENST00000409909 POLQO75417 2590 aa16.15■□□□□ 0.18
LSM5-204ENST00000409909 C15orf38-AP3S2A0A0A6YYH1 394 aa16.15■□□□□ 0.18
LSM5-204ENST00000409909 A0A0G2JNJ9 132 aa16.15■□□□□ 0.18
LSM5-204ENST00000409909 PRAMEF25A6NGN4 478 aa16.15■□□□□ 0.18
LSM5-204ENST00000409909 PIP5K1BO14986 540 aa16.15■□□□□ 0.18
LSM5-204ENST00000409909 SNPHO15079 494 aa16.15■□□□□ 0.18
LSM5-204ENST00000409909 AKAP10O43572 662 aa16.15■□□□□ 0.18
LSM5-204ENST00000409909 SLITRK5O94991 958 aa16.15■□□□□ 0.18
LSM5-204ENST00000409909 BPGMP07738 259 aa16.15■□□□□ 0.18
LSM5-204ENST00000409909 HOXD4P09016 255 aaPredicted RBP16.15■□□□□ 0.18
LSM5-204ENST00000409909 NEFHP12036 1026 aa16.15■□□□□ 0.18
LSM5-204ENST00000409909 NTSP30990 170 aa16.15■□□□□ 0.18
LSM5-204ENST00000409909 PTGER4P35408 488 aa16.15■□□□□ 0.18
LSM5-204ENST00000409909 RPL38P63173 70 aaKnown RBP16.15■□□□□ 0.18
LSM5-204ENST00000409909 TOMM20Q15388 145 aa16.15■□□□□ 0.18
LSM5-204ENST00000409909 ZNF385BQ569K4 471 aa16.15■□□□□ 0.18
LSM5-204ENST00000409909 WIPI1Q5MNZ9 446 aaPredicted RBP16.15■□□□□ 0.18
LSM5-204ENST00000409909 SH2D4BQ5SQS7 431 aa16.15■□□□□ 0.18
LSM5-204ENST00000409909 CES4AQ5XG92 561 aa16.15■□□□□ 0.18
LSM5-204ENST00000409909 VASNQ6EMK4 673 aa16.15■□□□□ 0.18
LSM5-204ENST00000409909 SEM1Q6ZVN7 128 aa16.15■□□□□ 0.18
LSM5-204ENST00000409909 LARP4Q71RC2 724 aaKnown RBP eCLIP16.15■□□□□ 0.184e-10■□□□□ 10.7
LSM5-204ENST00000409909 ZNF551Q7Z340 670 aaPredicted RBP16.15■□□□□ 0.18
LSM5-204ENST00000409909 DDIASQ8IXT1 998 aa16.15■□□□□ 0.18
LSM5-204ENST00000409909 INTS1Q8N201 2190 aaKnown RBP16.15■□□□□ 0.18
LSM5-204ENST00000409909 OR10Q1Q8NGQ4 319 aa16.15■□□□□ 0.18
LSM5-204ENST00000409909 CLHC1Q8NHS4 586 aa16.15■□□□□ 0.18
LSM5-204ENST00000409909 AGR3Q8TD06 166 aa16.15■□□□□ 0.18
LSM5-204ENST00000409909 CIDECQ96AQ7 238 aaPredicted RBP16.15■□□□□ 0.18
LSM5-204ENST00000409909 TMCO6Q96DC7 493 aa16.15■□□□□ 0.18
LSM5-204ENST00000409909 TSSK3Q96PN8 268 aa16.15■□□□□ 0.18
LSM5-204ENST00000409909 SPOCK3Q9BQ16 436 aa16.15■□□□□ 0.18
LSM5-204ENST00000409909 ENKD1Q9H0I2 346 aa16.15■□□□□ 0.18
LSM5-204ENST00000409909 EML4Q9HC35 981 aaKnown RBP16.15■□□□□ 0.18
LSM5-204ENST00000409909 SERHLQ9NQF3 203 aa16.15■□□□□ 0.18
LSM5-204ENST00000409909 NPDC1Q9NQX5 325 aaPredicted RBP16.15■□□□□ 0.18
LSM5-204ENST00000409909 Q9UFV3 132 aa16.15■□□□□ 0.18
LSM5-204ENST00000409909 GIMAP2Q9UG22 337 aa16.15■□□□□ 0.18
LSM5-204ENST00000409909 RAB21Q9UL25 225 aa16.15■□□□□ 0.18
LSM5-204ENST00000409909 MAPRE3Q9UPY8 281 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms