RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 MC3RP41968 323 aa16.96■□□□□ 0.3
CD40-201ENST00000372276 RAB8AP61006 207 aa16.96■□□□□ 0.3
CD40-201ENST00000372276 SSX1Q16384 188 aa16.96■□□□□ 0.3
CD40-201ENST00000372276 SYT14P1Q58G82 188 aa16.96■□□□□ 0.3
CD40-201ENST00000372276 ZCCHC12Q6PEW1 402 aa16.96■□□□□ 0.3
CD40-201ENST00000372276 ENPP7Q6UWV6 458 aa16.96■□□□□ 0.3
CD40-201ENST00000372276 ZNF730Q6ZMV8 503 aa16.96■□□□□ 0.3
CD40-201ENST00000372276 SLC22A16Q86VW1 577 aa16.96■□□□□ 0.3
CD40-201ENST00000372276 PEX5LQ8IYB4 626 aa16.96■□□□□ 0.3
CD40-201ENST00000372276 CLDN22Q8N7P3 220 aa16.96■□□□□ 0.3
CD40-201ENST00000372276 ZBTB8BQ8NAP8 495 aaPredicted RBP16.96■□□□□ 0.3
CD40-201ENST00000372276 ACOT11Q8WXI4 607 aaPredicted RBP16.96■□□□□ 0.3
CD40-201ENST00000372276 FGF14Q92915 247 aa16.96■□□□□ 0.3
CD40-201ENST00000372276 SMIM10Q96HG1 83 aa16.96■□□□□ 0.3
CD40-201ENST00000372276 ZNF582Q96NG8 517 aaPredicted RBP16.96■□□□□ 0.3
CD40-201ENST00000372276 LYRM4Q9HD34 91 aa16.96■□□□□ 0.3
CD40-201ENST00000372276 SCHIP1Q9P0W5 487 aaPredicted RBP16.96■□□□□ 0.3
CD40-201ENST00000372276 TBC1D29Q9UFV1 150 aa16.96■□□□□ 0.3
CD40-201ENST00000372276 TRAPPC4Q9Y296 219 aa16.96■□□□□ 0.3
CD40-201ENST00000372276 YBX2Q9Y2T7 364 aaKnown RBP16.96■□□□□ 0.3
CD40-201ENST00000372276 TRIOBPQ9H2D6 2365 aa16.95■□□□□ 0.3
CD40-201ENST00000372276 HYKKA2RU49 373 aa16.95■□□□□ 0.3
CD40-201ENST00000372276 ANTXRLA6NF34 631 aa16.95■□□□□ 0.3
CD40-201ENST00000372276 C4orf51C9J302 202 aa16.95■□□□□ 0.3
CD40-201ENST00000372276 ZNF670-ZNF695F2Z2N8 137 aa16.95■□□□□ 0.3
CD40-201ENST00000372276 STK25O00506 426 aa16.95■□□□□ 0.3
CD40-201ENST00000372276 EPPINO95925 133 aa16.95■□□□□ 0.3
CD40-201ENST00000372276 AK1P00568 194 aa16.95■□□□□ 0.3
CD40-201ENST00000372276 APOA1P02647 267 aa16.95■□□□□ 0.3
CD40-201ENST00000372276 THBS1P07996 1170 aa16.95■□□□□ 0.3
CD40-201ENST00000372276 DRD1P21728 446 aa16.95■□□□□ 0.3
CD40-201ENST00000372276 FPR3P25089 353 aa16.95■□□□□ 0.3
CD40-201ENST00000372276 TGFBR1P36897 503 aa16.95■□□□□ 0.3
CD40-201ENST00000372276 BNC1Q01954 994 aa16.95■□□□□ 0.3
CD40-201ENST00000372276 MINDY4Q4G0A6 757 aa16.95■□□□□ 0.3
CD40-201ENST00000372276 FAM109BQ6ICB4 259 aaPredicted RBP16.95■□□□□ 0.3
CD40-201ENST00000372276 USP53Q70EK8 1073 aa16.95■□□□□ 0.3
CD40-201ENST00000372276 VN1R4Q7Z5H5 301 aa16.95■□□□□ 0.3
CD40-201ENST00000372276 CCDC190Q86UF4 302 aa16.95■□□□□ 0.3
CD40-201ENST00000372276 PARP16Q8N5Y8 322 aa16.95■□□□□ 0.3
CD40-201ENST00000372276 OR9A2Q8NGT5 310 aa16.95■□□□□ 0.3
CD40-201ENST00000372276 OR52P1PQ8NH57 321 aa16.95■□□□□ 0.3
CD40-201ENST00000372276 DIO2Q92813 273 aa16.95■□□□□ 0.3
CD40-201ENST00000372276 C16orf58Q96GQ5 468 aa16.95■□□□□ 0.3
CD40-201ENST00000372276 LRR1Q96L50 414 aa16.95■□□□□ 0.3
CD40-201ENST00000372276 C10orf90Q96M02 699 aa16.95■□□□□ 0.3
CD40-201ENST00000372276 YIPF4Q9BSR8 244 aa16.95■□□□□ 0.3
CD40-201ENST00000372276 ASPNQ9BXN1 380 aa16.95■□□□□ 0.3
CD40-201ENST00000372276 CERS4Q9HA82 394 aa16.95■□□□□ 0.3
CD40-201ENST00000372276 IRAK4Q9NWZ3 460 aa16.95■□□□□ 0.3
CD40-201ENST00000372276 MSRAQ9UJ68 235 aa16.95■□□□□ 0.3
CD40-201ENST00000372276 ZNF229Q9UJW7 825 aa16.95■□□□□ 0.3
CD40-201ENST00000372276 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.94■□□□□ 0.3
CD40-201ENST00000372276 A0A087WUU8 490 aa16.94■□□□□ 0.3
CD40-201ENST00000372276 LRRC72A6NJI9 287 aa16.94■□□□□ 0.3
CD40-201ENST00000372276 FAM170BA6NMN3 283 aa16.94■□□□□ 0.3
CD40-201ENST00000372276 ZSCAN9O15535 394 aaPredicted RBP16.94■□□□□ 0.3
CD40-201ENST00000372276 PRKYO43930 277 aa16.94■□□□□ 0.3
CD40-201ENST00000372276 HMGN1P05114 100 aa16.94■□□□□ 0.3
CD40-201ENST00000372276 CPEP16870 476 aa16.94■□□□□ 0.3
CD40-201ENST00000372276 HNRNPA2B1P22626 353 aaKnown RBP16.94■□□□□ 0.3
CD40-201ENST00000372276 MAT2AP31153 395 aaKnown RBP16.94■□□□□ 0.3
CD40-201ENST00000372276 CHRNEQ04844 493 aa16.94■□□□□ 0.3
CD40-201ENST00000372276 RAB30Q15771 203 aa16.94■□□□□ 0.3
CD40-201ENST00000372276 ARHGAP11BQ3KRB8 267 aa16.94■□□□□ 0.3
CD40-201ENST00000372276 MFSD12Q6NUT3 480 aa16.94■□□□□ 0.3
CD40-201ENST00000372276 OR2L13Q8N349 312 aa16.94■□□□□ 0.3
CD40-201ENST00000372276 OR52I1Q8NGK6 324 aa16.94■□□□□ 0.3
CD40-201ENST00000372276 OR1E3Q8WZA6 343 aa16.94■□□□□ 0.3
CD40-201ENST00000372276 GIMAP5Q96F15 307 aa16.94■□□□□ 0.3
CD40-201ENST00000372276 COQ7Q99807 217 aa16.94■□□□□ 0.3
CD40-201ENST00000372276 ARMC7Q9H6L4 198 aa16.94■□□□□ 0.3
CD40-201ENST00000372276 SYNDIG1Q9H7V2 258 aa16.94■□□□□ 0.3
CD40-201ENST00000372276 ABCB10Q9NRK6 738 aa16.94■□□□□ 0.3
CD40-201ENST00000372276 MDC1Q14676 2089 aaKnown RBP16.94■□□□□ 0.3
CD40-201ENST00000372276 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.93■□□□□ 0.3
CD40-201ENST00000372276 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.93■□□□□ 0.3
CD40-201ENST00000372276 A0A1W2PQF6 199 aa16.93■□□□□ 0.3
CD40-201ENST00000372276 GPX5O75715 221 aa16.93■□□□□ 0.3
CD40-201ENST00000372276 UBXN7O94888 489 aa16.93■□□□□ 0.3
CD40-201ENST00000372276 KLF8O95600 359 aaPredicted RBP16.93■□□□□ 0.3
CD40-201ENST00000372276 IL1AP01583 271 aa16.93■□□□□ 0.3
CD40-201ENST00000372276 ZNF888P0CJ79 500 aaPredicted RBP16.93■□□□□ 0.3
CD40-201ENST00000372276 C8orf89P0DMQ9 161 aa16.93■□□□□ 0.3
CD40-201ENST00000372276 WNT4P56705 351 aa16.93■□□□□ 0.3
CD40-201ENST00000372276 RGS8P57771 180 aaPredicted RBP16.93■□□□□ 0.3
CD40-201ENST00000372276 FOXD4Q12950 439 aaPredicted RBP16.93■□□□□ 0.3
CD40-201ENST00000372276 SETD6Q8TBK2 473 aa16.93■□□□□ 0.3
CD40-201ENST00000372276 FGF11Q92914 225 aa16.93■□□□□ 0.3
CD40-201ENST00000372276 WFDC6Q9BQY6 131 aa16.93■□□□□ 0.3
CD40-201ENST00000372276 SLC30A2Q9BRI3 323 aa16.93■□□□□ 0.3
CD40-201ENST00000372276 SAP130Q9H0E3 1048 aa16.93■□□□□ 0.3
CD40-201ENST00000372276 EXOSC4Q9NPD3 245 aaKnown RBP16.93■□□□□ 0.3
CD40-201ENST00000372276 FBXL21Q9UKT6 434 aa16.93■□□□□ 0.3
CD40-201ENST00000372276 DOLKQ9UPQ8 538 aa16.93■□□□□ 0.3
CD40-201ENST00000372276 PCDHGB6Q9Y5F9 930 aa16.93■□□□□ 0.3
CD40-201ENST00000372276 HS3ST3A1Q9Y663 406 aa16.93■□□□□ 0.3
CD40-201ENST00000372276 DOCK9Q9BZ29 2069 aa16.93■□□□□ 0.3
CD40-201ENST00000372276 A0A087WV62 115 aa16.92■□□□□ 0.3
CD40-201ENST00000372276 KDM4EB2RXH2 506 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms