RNA–Protein interactions for RNA: ENST00000360019.7

CLN3-206, Transcript of CLN3, battenin, humanhuman

TSL 2 BASIC

Gene CLN3, Length 1,840 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-206ENST00000360019 BBS10Q8TAM1 723 aa17.3■□□□□ 0.36
CLN3-206ENST00000360019 SLC2A12Q8TD20 617 aa17.3■□□□□ 0.36
CLN3-206ENST00000360019 COL21A1Q96P44 957 aa17.3■□□□□ 0.36
CLN3-206ENST00000360019 C3orf18Q9UK00 162 aa17.3■□□□□ 0.36
CLN3-206ENST00000360019 GPC6Q9Y625 555 aaPredicted RBP17.3■□□□□ 0.36
CLN3-206ENST00000360019 CEP250Q9BV73 2442 aa17.29■□□□□ 0.36
CLN3-206ENST00000360019 C9orf172C9J069 976 aa17.29■□□□□ 0.36
CLN3-206ENST00000360019 FCMRO60667 390 aa17.29■□□□□ 0.36
CLN3-206ENST00000360019 ALOX12BO75342 701 aa17.29■□□□□ 0.36
CLN3-206ENST00000360019 PDE9AO76083 593 aa17.29■□□□□ 0.36
CLN3-206ENST00000360019 IFNA14P01570 189 aa17.29■□□□□ 0.36
CLN3-206ENST00000360019 SLC5A2P31639 672 aa17.29■□□□□ 0.36
CLN3-206ENST00000360019 SLC37A1P57057 533 aa17.29■□□□□ 0.36
CLN3-206ENST00000360019 KCNJ10P78508 379 aa17.29■□□□□ 0.36
CLN3-206ENST00000360019 CHRNEQ04844 493 aa17.29■□□□□ 0.36
CLN3-206ENST00000360019 DUSP7Q16829 419 aa17.29■□□□□ 0.36
CLN3-206ENST00000360019 ARHGAP11BQ3KRB8 267 aa17.29■□□□□ 0.36
CLN3-206ENST00000360019 PRAMEF8Q5VWM4 474 aa17.29■□□□□ 0.36
CLN3-206ENST00000360019 PRAMEF7Q5VXH5 474 aa17.29■□□□□ 0.36
CLN3-206ENST00000360019 FKBP9P1Q75LS8 142 aa17.29■□□□□ 0.36
CLN3-206ENST00000360019 ANKRD37Q7Z713 158 aa17.29■□□□□ 0.36
CLN3-206ENST00000360019 COX18Q8N8Q8 333 aa17.29■□□□□ 0.36
CLN3-206ENST00000360019 OR7G1Q8NGA0 311 aa17.29■□□□□ 0.36
CLN3-206ENST00000360019 OR14A16Q8NHC5 309 aa17.29■□□□□ 0.36
CLN3-206ENST00000360019 GPR151Q8TDV0 419 aa17.29■□□□□ 0.36
CLN3-206ENST00000360019 ZNF721Q8TF20 911 aa17.29■□□□□ 0.36
CLN3-206ENST00000360019 OR8D2Q9GZM6 311 aa17.29■□□□□ 0.36
CLN3-206ENST00000360019 WDR54Q9H977 334 aa17.29■□□□□ 0.36
CLN3-206ENST00000360019 DSPPQ9NZW4 1301 aa17.29■□□□□ 0.36
CLN3-206ENST00000360019 FREM2Q5SZK8 3169 aa17.29■□□□□ 0.36
CLN3-206ENST00000360019 A0A0G2JPF8 293 aa17.28■□□□□ 0.36
CLN3-206ENST00000360019 HNRNPCL2B2RXH8 293 aa17.28■□□□□ 0.36
CLN3-206ENST00000360019 HNRNPCL3B7ZW38 293 aa17.28■□□□□ 0.36
CLN3-206ENST00000360019 DYRK3O43781 588 aa17.28■□□□□ 0.36
CLN3-206ENST00000360019 HNRNPCL4P0DMR1 293 aa17.28■□□□□ 0.36
CLN3-206ENST00000360019 FCGR1AP12314 374 aa17.28■□□□□ 0.36
CLN3-206ENST00000360019 CD247P20963 164 aa17.28■□□□□ 0.36
CLN3-206ENST00000360019 GABRA3P34903 492 aa17.28■□□□□ 0.36
CLN3-206ENST00000360019 EMP2P54851 167 aa17.28■□□□□ 0.36
CLN3-206ENST00000360019 ATP6AP1Q15904 470 aa17.28■□□□□ 0.36
CLN3-206ENST00000360019 LRRC36Q1X8D7 754 aa17.28■□□□□ 0.36
CLN3-206ENST00000360019 C3orf38Q5JPI3 329 aa17.28■□□□□ 0.36
CLN3-206ENST00000360019 DCST2Q5T1A1 773 aa17.28■□□□□ 0.36
CLN3-206ENST00000360019 CCNJQ5T5M9 372 aa17.28■□□□□ 0.36
CLN3-206ENST00000360019 FAM69BQ5VUD6 431 aa17.28■□□□□ 0.36
CLN3-206ENST00000360019 NPSR1Q6W5P4 371 aa17.28■□□□□ 0.36
CLN3-206ENST00000360019 HMGN2P46Q86SG4 172 aa17.28■□□□□ 0.36
CLN3-206ENST00000360019 CHDHQ8NE62 594 aaPredicted RBP17.28■□□□□ 0.36
CLN3-206ENST00000360019 WDR36Q8NI36 951 aaKnown RBP17.28■□□□□ 0.36
CLN3-206ENST00000360019 DAZLQ92904 295 aaKnown RBP17.28■□□□□ 0.36
CLN3-206ENST00000360019 ZNF607Q96SK3 696 aa17.28■□□□□ 0.36
CLN3-206ENST00000360019 SDF2Q99470 211 aa17.28■□□□□ 0.36
CLN3-206ENST00000360019 CRB3Q9BUF7 120 aa17.28■□□□□ 0.36
CLN3-206ENST00000360019 BTBD2Q9BX70 525 aa17.28■□□□□ 0.36
CLN3-206ENST00000360019 QRSL1Q9H0R6 528 aaKnown RBP17.28■□□□□ 0.36
CLN3-206ENST00000360019 IL1RAPQ9NPH3 570 aa17.28■□□□□ 0.36
CLN3-206ENST00000360019 SATB2Q9UPW6 733 aa17.28■□□□□ 0.36
CLN3-206ENST00000360019 PCDHGA3Q9Y5H0 932 aa17.28■□□□□ 0.36
CLN3-206ENST00000360019 IGHV3-20A0A0C4DH32 117 aa17.28■□□□□ 0.36
CLN3-206ENST00000360019 GXYLT2A0PJZ3 443 aa17.28■□□□□ 0.36
CLN3-206ENST00000360019 SYNDIG1LA6NDD5 238 aa17.28■□□□□ 0.36
CLN3-206ENST00000360019 TM4SF5O14894 197 aa17.28■□□□□ 0.36
CLN3-206ENST00000360019 DLGAP3O95886 979 aa17.28■□□□□ 0.36
CLN3-206ENST00000360019 ETS2P15036 469 aa17.28■□□□□ 0.36
CLN3-206ENST00000360019 TNFRSF1BP20333 461 aa17.28■□□□□ 0.36
CLN3-206ENST00000360019 CSRP1P21291 193 aaKnown RBP17.28■□□□□ 0.36
CLN3-206ENST00000360019 VHLP40337 213 aa17.28■□□□□ 0.36
CLN3-206ENST00000360019 VLDLRP98155 873 aa17.28■□□□□ 0.36
CLN3-206ENST00000360019 CYP27C1Q4G0S4 372 aa17.28■□□□□ 0.36
CLN3-206ENST00000360019 OGFRL1Q5TC84 451 aaPredicted RBP17.28■□□□□ 0.36
CLN3-206ENST00000360019 FRRS1Q6ZNA5 592 aa17.28■□□□□ 0.36
CLN3-206ENST00000360019 ARMC8Q8IUR7 673 aa17.28■□□□□ 0.36
CLN3-206ENST00000360019 AMER2Q8N7J2 671 aa17.28■□□□□ 0.36
CLN3-206ENST00000360019 GPR32P1Q8NGA4 272 aa17.28■□□□□ 0.36
CLN3-206ENST00000360019 C7orf34Q96L11 122 aa17.28■□□□□ 0.36
CLN3-206ENST00000360019 ITPAQ9BY32 194 aa17.28■□□□□ 0.36
CLN3-206ENST00000360019 SPRY4Q9C004 299 aa17.28■□□□□ 0.36
CLN3-206ENST00000360019 YY1AP1Q9H869 796 aa17.28■□□□□ 0.36
CLN3-206ENST00000360019 CALML5Q9NZT1 146 aa17.28■□□□□ 0.36
CLN3-206ENST00000360019 GPN3Q9UHW5 284 aaPredicted RBP17.28■□□□□ 0.36
CLN3-206ENST00000360019 PRAMEF25A6NGN4 478 aa17.27■□□□□ 0.36
CLN3-206ENST00000360019 CAPNS1P04632 268 aa17.27■□□□□ 0.36
CLN3-206ENST00000360019 CT45A8P0DMV1 189 aa17.27■□□□□ 0.36
CLN3-206ENST00000360019 CT45A9P0DMV2 189 aa17.27■□□□□ 0.36
CLN3-206ENST00000360019 HOXB6P17509 224 aaKnown RBP17.27■□□□□ 0.36
CLN3-206ENST00000360019 HPCAP84074 193 aa17.27■□□□□ 0.36
CLN3-206ENST00000360019 NCF4Q15080 339 aa17.27■□□□□ 0.36
CLN3-206ENST00000360019 IQCCQ4KMZ1 466 aa17.27■□□□□ 0.36
CLN3-206ENST00000360019 SFT2D3Q587I9 215 aa17.27■□□□□ 0.36
CLN3-206ENST00000360019 CT45A2Q5DJT8 189 aa17.27■□□□□ 0.36
CLN3-206ENST00000360019 TYW3Q6IPR3 259 aaKnown RBP17.27■□□□□ 0.36
CLN3-206ENST00000360019 TIPARPQ7Z3E1 657 aaKnown RBP17.27■□□□□ 0.36
CLN3-206ENST00000360019 KRT73Q86Y46 540 aa17.27■□□□□ 0.36
CLN3-206ENST00000360019 ZDHHC21Q8IVQ6 265 aa17.27■□□□□ 0.36
CLN3-206ENST00000360019 LZICQ8WZA0 190 aa17.27■□□□□ 0.36
CLN3-206ENST00000360019 ZG16BQ96DA0 208 aa17.27■□□□□ 0.36
CLN3-206ENST00000360019 TACO1Q9BSH4 297 aaKnown RBP17.27■□□□□ 0.36
CLN3-206ENST00000360019 NUDT9Q9BW91 350 aa17.27■□□□□ 0.36
CLN3-206ENST00000360019 ZNF350Q9GZX5 532 aa17.27■□□□□ 0.36
CLN3-206ENST00000360019 FBXO34Q9NWN3 711 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms