RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 MEX3DQ86XN8 651 aaKnown RBP8.17□□□□□ -1.1
CLK1-201ENST00000321356 TCTE3Q8IZS6 198 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 GJD3Q8N144 294 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 DUSP18Q8NEJ0 188 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 ATP6V1C2Q8NEY4 427 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 TTLQ8NG68 377 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 OR56A1Q8NGH5 318 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 OR2A1Q8NGT9 310 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 ZNF296Q8WUU4 475 aaPredicted RBP8.17□□□□□ -1.1
CLK1-201ENST00000321356 MOAP1Q96BY2 351 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 CNRIP1Q96F85 164 aaPredicted RBP8.17□□□□□ -1.1
CLK1-201ENST00000321356 OTUB1Q96FW1 271 aaPredicted RBP8.17□□□□□ -1.1
CLK1-201ENST00000321356 RIPOR3Q96MK2 946 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 FYTTD1Q96QD9 318 aaKnown RBP8.17□□□□□ -1.1
CLK1-201ENST00000321356 BBS4Q96RK4 519 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 TTYH2Q9BSA4 534 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 JAM3Q9BX67 310 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 PRRG3Q9BZD7 231 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 SLC38A1Q9H2H9 487 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 RERGLQ9H628 205 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 C11orf49Q9H6J7 331 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 SLA2Q9H6Q3 261 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 POLMQ9NP87 494 aaPredicted RBP8.17□□□□□ -1.1
CLK1-201ENST00000321356 CTPS2Q9NRF8 586 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 TOR4AQ9NXH8 423 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 PAQR5Q9NXK6 330 aaPredicted RBP8.17□□□□□ -1.1
CLK1-201ENST00000321356 NUFIP1Q9UHK0 495 aaKnown RBP8.17□□□□□ -1.1
CLK1-201ENST00000321356 GPR52Q9Y2T5 361 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 BOLA1Q9Y3E2 137 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 CHST2Q9Y4C5 530 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 ASB4Q9Y574 426 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 PCDHGB7Q9Y5F8 929 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 A0A1W2PR48 441 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 SURF4O15260 269 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 KLF4O43474 513 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 PROM1O43490 865 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 SLC35G4P0C7Q5 338 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 ALAS2P22557 587 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 FPR3P25089 353 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 APEX1P27695 318 aaKnown RBP8.17□□□□□ -1.1
CLK1-201ENST00000321356 SSTR4P31391 388 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 SOX18P35713 384 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 P2RY2P41231 377 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 MAP2K3P46734 347 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 EVX1P49640 407 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 CAV3P56539 151 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 TAS2R41P59536 307 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 HTRA4P83105 476 aaPredicted RBP8.17□□□□□ -1.1
CLK1-201ENST00000321356 DAB2P98082 770 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 SLC9A5Q14940 896 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 QPRTQ15274 297 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 MLF2Q15773 248 aaPredicted RBP8.17□□□□□ -1.1
CLK1-201ENST00000321356 UAP1L1Q3KQV9 507 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 PLPP4Q5VZY2 271 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 TIGD3Q6B0B8 471 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 VASNQ6EMK4 673 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 CNIH2Q6PI25 160 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 VASH1Q7L8A9 365 aaPredicted RBP8.17□□□□□ -1.1
CLK1-201ENST00000321356 ZNF438Q7Z4V0 828 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 CAMKK1Q8N5S9 505 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 OR52N1Q8NH53 320 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 ENKURQ8TC29 256 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 CXorf40AQ8TE69 158 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 ING5Q8WYH8 240 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 RFKQ969G6 155 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 RSPRY1Q96DX4 576 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 DCLRE1CQ96SD1 692 aaKnown RBP8.17□□□□□ -1.1
CLK1-201ENST00000321356 KCNJ15Q99712 375 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 ATF6BQ99941 703 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 YIPF4Q9BSR8 244 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 PRR14Q9BWN1 585 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 LGR4Q9BXB1 951 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 HDAC8Q9BY41 377 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 B3GAT2Q9NPZ5 323 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 PLSCR3Q9NRY6 295 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 SEMA4GQ9NTN9 838 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 MED17Q9NVC6 651 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 RBFOX1Q9NWB1 397 aaKnown RBP8.17□□□□□ -1.1
CLK1-201ENST00000321356 ASB6Q9NWX5 421 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 IL20Q9NYY1 176 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 CNIH4Q9P003 139 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 KLHL21Q9UJP4 597 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 CES1P1Q9UKY3 287 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 POLHQ9Y253 713 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 EXOGQ9Y2C4 368 aaKnown RBP8.17□□□□□ -1.1
CLK1-201ENST00000321356 GPR55Q9Y2T6 319 aaPredicted RBP8.17□□□□□ -1.1
CLK1-201ENST00000321356 KCNE3Q9Y6H6 103 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 MAU2Q9Y6X3 613 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 SHISA3A0PJX4 238 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 SMIM30A4D0T7 59 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 GLOD5A6NK44 160 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 CASKO14936 926 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 PGRMC2O15173 223 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 AKAP8O43823 692 aaKnown RBP8.16□□□□□ -1.1
CLK1-201ENST00000321356 GUCY1B2O75343 617 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 SNRNP200O75643 2136 aaKnown RBP8.16□□□□□ -1.1
CLK1-201ENST00000321356 CSF2P04141 144 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 HLA-DPB1P04440 258 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 CLTBP09497 229 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 HNRNPA1P09651 372 aaKnown RBP eCLIP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms