RNA–Protein interactions for RNA: ENST00000525004.5

UBXN1-205, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-205ENST00000525004 TAGLN3Q9UI15 199 aa12.99□□□□□ -0.33
UBXN1-205ENST00000525004 PCDHGA9Q9Y5G4 932 aaKnown RBP12.99□□□□□ -0.33
UBXN1-205ENST00000525004 PKD1L2Q7Z442 2459 aa12.99□□□□□ -0.33
UBXN1-205ENST00000525004 FRG2CA6NGY1 282 aa12.98□□□□□ -0.33
UBXN1-205ENST00000525004 CLIC1O00299 241 aa12.98□□□□□ -0.33
UBXN1-205ENST00000525004 NME6O75414 186 aaPredicted RBP12.98□□□□□ -0.33
UBXN1-205ENST00000525004 UNC5CO95185 931 aa12.98□□□□□ -0.33
UBXN1-205ENST00000525004 NADKO95544 446 aaPredicted RBP12.98□□□□□ -0.33
UBXN1-205ENST00000525004 ANP32DO95626 131 aa12.98□□□□□ -0.33
UBXN1-205ENST00000525004 KRT75O95678 551 aa12.98□□□□□ -0.33
UBXN1-205ENST00000525004 C1QCP02747 245 aa12.98□□□□□ -0.33
UBXN1-205ENST00000525004 BMP2P12643 396 aa12.98□□□□□ -0.33
UBXN1-205ENST00000525004 PRIM2P49643 509 aa12.98□□□□□ -0.33
UBXN1-205ENST00000525004 CXADRP78310 365 aa12.98□□□□□ -0.33
UBXN1-205ENST00000525004 TBR1Q16650 682 aa12.98□□□□□ -0.33
UBXN1-205ENST00000525004 MMEL1Q495T6 779 aa12.98□□□□□ -0.33
UBXN1-205ENST00000525004 CRB2Q5IJ48 1285 aa12.98□□□□□ -0.33
UBXN1-205ENST00000525004 TCTN3Q6NUS6 607 aa12.98□□□□□ -0.33
UBXN1-205ENST00000525004 BORAQ6PGQ7 559 aa12.98□□□□□ -0.33
UBXN1-205ENST00000525004 DHDDSQ86SQ9 333 aa12.98□□□□□ -0.33
UBXN1-205ENST00000525004 CLEC4FQ8N1N0 589 aa12.98□□□□□ -0.33
UBXN1-205ENST00000525004 SLC5A8Q8N695 610 aa12.98□□□□□ -0.33
UBXN1-205ENST00000525004 SLC16A11Q8NCK7 471 aa12.98□□□□□ -0.33
UBXN1-205ENST00000525004 OR52N2Q8NGI0 321 aa12.98□□□□□ -0.33
UBXN1-205ENST00000525004 OR5AK3PQ8NH89 298 aa12.98□□□□□ -0.33
UBXN1-205ENST00000525004 RCN3Q96D15 328 aa12.98□□□□□ -0.33
UBXN1-205ENST00000525004 HSPBAP1Q96EW2 488 aa12.98□□□□□ -0.33
UBXN1-205ENST00000525004 C16orf58Q96GQ5 468 aa12.98□□□□□ -0.33
UBXN1-205ENST00000525004 LCORQ96JN0 433 aaPredicted RBP12.98□□□□□ -0.33
UBXN1-205ENST00000525004 ZNF354BQ96LW1 612 aa12.98□□□□□ -0.33
UBXN1-205ENST00000525004 SMAD5Q99717 465 aaKnown RBP12.98□□□□□ -0.33
UBXN1-205ENST00000525004 GPATCH1Q9BRR8 931 aaKnown RBP12.98□□□□□ -0.33
UBXN1-205ENST00000525004 ITPAQ9BY32 194 aa12.98□□□□□ -0.33
UBXN1-205ENST00000525004 PIGUQ9H490 435 aa12.98□□□□□ -0.33
UBXN1-205ENST00000525004 TRIM45Q9H8W5 580 aaPredicted RBP12.98□□□□□ -0.33
UBXN1-205ENST00000525004 DUSP22Q9NRW4 184 aa12.98□□□□□ -0.33
UBXN1-205ENST00000525004 GID8Q9NWU2 228 aa12.98□□□□□ -0.33
UBXN1-205ENST00000525004 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.98□□□□□ -0.33
UBXN1-205ENST00000525004 YARS2Q9Y2Z4 477 aaKnown RBP12.98□□□□□ -0.33
UBXN1-205ENST00000525004 USP24Q9UPU5 2620 aa12.98□□□□□ -0.33
UBXN1-205ENST00000525004 DUXAA6NLW8 204 aa12.97□□□□□ -0.33
UBXN1-205ENST00000525004 ACOX3O15254 700 aa12.97□□□□□ -0.33
UBXN1-205ENST00000525004 ASNA1O43681 348 aa12.97□□□□□ -0.33
UBXN1-205ENST00000525004 ZNF354AO60765 605 aaPredicted RBP12.97□□□□□ -0.33
UBXN1-205ENST00000525004 KRT16P08779 473 aa12.97□□□□□ -0.33
UBXN1-205ENST00000525004 ACP2P11117 423 aa12.97□□□□□ -0.33
UBXN1-205ENST00000525004 NAGAP17050 411 aa12.97□□□□□ -0.33
UBXN1-205ENST00000525004 MATN1P21941 496 aa12.97□□□□□ -0.33
UBXN1-205ENST00000525004 PPIBP23284 216 aaKnown RBP12.97□□□□□ -0.33
UBXN1-205ENST00000525004 ITGA3P26006 1051 aa12.97□□□□□ -0.33
UBXN1-205ENST00000525004 TRHRP34981 398 aaPredicted RBP12.97□□□□□ -0.33
UBXN1-205ENST00000525004 CCL11P51671 97 aa12.97□□□□□ -0.33
UBXN1-205ENST00000525004 MNAT1P51948 309 aa12.97□□□□□ -0.33
UBXN1-205ENST00000525004 PRKAG1P54619 331 aa12.97□□□□□ -0.33
UBXN1-205ENST00000525004 FADDQ13158 208 aa12.97□□□□□ -0.33
UBXN1-205ENST00000525004 TP53BP2Q13625 1128 aa12.97□□□□□ -0.33
UBXN1-205ENST00000525004 NFYCQ13952 458 aa12.97□□□□□ -0.33
UBXN1-205ENST00000525004 LASP1Q14847 261 aaKnown RBP12.97□□□□□ -0.33
UBXN1-205ENST00000525004 MEP1AQ16819 746 aa12.97□□□□□ -0.33
UBXN1-205ENST00000525004 SPDYE7PQ495Y7 208 aa12.97□□□□□ -0.33
UBXN1-205ENST00000525004 CYP27C1Q4G0S4 372 aa12.97□□□□□ -0.33
UBXN1-205ENST00000525004 ACER2Q5QJU3 275 aa12.97□□□□□ -0.33
UBXN1-205ENST00000525004 NANOGP8Q6NSW7 305 aa12.97□□□□□ -0.33
UBXN1-205ENST00000525004 LYPD8Q6UX82 237 aa12.97□□□□□ -0.33
UBXN1-205ENST00000525004 NPSR1Q6W5P4 371 aa12.97□□□□□ -0.33
UBXN1-205ENST00000525004 FDCSPQ8NFU4 85 aa12.97□□□□□ -0.33
UBXN1-205ENST00000525004 FAM110BQ8TC76 370 aa12.97□□□□□ -0.33
UBXN1-205ENST00000525004 SLC35A4Q96G79 324 aa12.97□□□□□ -0.33
UBXN1-205ENST00000525004 AURKBQ96GD4 344 aaPredicted RBP12.97□□□□□ -0.33
UBXN1-205ENST00000525004 HOPXQ9BPY8 73 aaPredicted RBP12.97□□□□□ -0.33
UBXN1-205ENST00000525004 CPPED1Q9BRF8 314 aaPredicted RBP12.97□□□□□ -0.33
UBXN1-205ENST00000525004 NXF5Q9H1B4 397 aaKnown RBP12.97□□□□□ -0.33
UBXN1-205ENST00000525004 CDCP1Q9H5V8 836 aa12.97□□□□□ -0.33
UBXN1-205ENST00000525004 NANOGQ9H9S0 305 aa12.97□□□□□ -0.33
UBXN1-205ENST00000525004 PCDHGB7Q9Y5F8 929 aa12.97□□□□□ -0.33
UBXN1-205ENST00000525004 NINQ8N4C6 2090 aa12.97□□□□□ -0.33
UBXN1-205ENST00000525004 ATMQ13315 3056 aa12.96□□□□□ -0.33
UBXN1-205ENST00000525004 AIM2O14862 343 aa12.96□□□□□ -0.33
UBXN1-205ENST00000525004 MAN1A2O60476 641 aa12.96□□□□□ -0.33
UBXN1-205ENST00000525004 CBX6O95503 412 aa12.96□□□□□ -0.33
UBXN1-205ENST00000525004 GUSBP08236 651 aa12.96□□□□□ -0.33
UBXN1-205ENST00000525004 CALB2P22676 271 aa12.96□□□□□ -0.33
UBXN1-205ENST00000525004 SLC6A2P23975 617 aa12.96□□□□□ -0.33
UBXN1-205ENST00000525004 SOAT1P35610 550 aa12.96□□□□□ -0.33
UBXN1-205ENST00000525004 CHI3L1P36222 383 aaPredicted RBP12.96□□□□□ -0.33
UBXN1-205ENST00000525004 CORO7P57737 925 aa12.96□□□□□ -0.33
UBXN1-205ENST00000525004 RGNQ15493 299 aa12.96□□□□□ -0.33
UBXN1-205ENST00000525004 DUSP5Q16690 384 aa12.96□□□□□ -0.33
UBXN1-205ENST00000525004 LINC00303Q3SY05 128 aa12.96□□□□□ -0.33
UBXN1-205ENST00000525004 AGAP7PQ5VUJ5 663 aa12.96□□□□□ -0.33
UBXN1-205ENST00000525004 HLA-DQA1Q5Y7H0 255 aa12.96□□□□□ -0.33
UBXN1-205ENST00000525004 B3GNTL1Q67FW5 361 aaPredicted RBP12.96□□□□□ -0.33
UBXN1-205ENST00000525004 HEPHL1Q6MZM0 1159 aa12.96□□□□□ -0.33
UBXN1-205ENST00000525004 IGFL3Q6UXB1 125 aa12.96□□□□□ -0.33
UBXN1-205ENST00000525004 ISLR2Q6UXK2 745 aa12.96□□□□□ -0.33
UBXN1-205ENST00000525004 DNAJC14Q6Y2X3 702 aaPredicted RBP12.96□□□□□ -0.33
UBXN1-205ENST00000525004 RNF130Q86XS8 419 aa12.96□□□□□ -0.33
UBXN1-205ENST00000525004 SIRT6Q8N6T7 355 aa12.96□□□□□ -0.33
UBXN1-205ENST00000525004 OR8J3Q8NGG0 315 aa12.96□□□□□ -0.33
UBXN1-205ENST00000525004 CRELD1Q96HD1 420 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms