RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, human

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1E-208	ENST00000431611	TSPAN8	P19075	237 aa		13.77	□□□□□ -0.21
CSNK1E-208	ENST00000431611	SERPINB9	P50453	376 aa		13.77	□□□□□ -0.21
CSNK1E-208	ENST00000431611	TRA2B	P62995	288 aa	Known RBP	13.77	□□□□□ -0.21
CSNK1E-208	ENST00000431611	ADAM8	P78325	824 aa		13.77	□□□□□ -0.21
CSNK1E-208	ENST00000431611	SRY	Q05066	204 aa		13.77	□□□□□ -0.21
CSNK1E-208	ENST00000431611	DUSP2	Q05923	314 aa		13.77	□□□□□ -0.21
CSNK1E-208	ENST00000431611	LTB4R	Q15722	352 aa		13.77	□□□□□ -0.21
CSNK1E-208	ENST00000431611	DEFB113	Q30KQ7	82 aa		13.77	□□□□□ -0.21
CSNK1E-208	ENST00000431611	FAM180B	Q6P0A1	224 aa		13.77	□□□□□ -0.21
CSNK1E-208	ENST00000431611	LETMD1	Q6P1Q0	360 aa		13.77	□□□□□ -0.21
CSNK1E-208	ENST00000431611	RELL1	Q8IUW5	271 aa		13.77	□□□□□ -0.21
CSNK1E-208	ENST00000431611	TRIM42	Q8IWZ5	723 aa		13.77	□□□□□ -0.21
CSNK1E-208	ENST00000431611	NIN	Q8N4C6	2090 aa		13.77	□□□□□ -0.21
CSNK1E-208	ENST00000431611	C1orf52	Q8N6N3	182 aa	Known RBP	13.77	□□□□□ -0.21
CSNK1E-208	ENST00000431611	ZNF483	Q8TF39	744 aa	Predicted RBP	13.77	□□□□□ -0.21
CSNK1E-208	ENST00000431611	TMCO6	Q96DC7	493 aa		13.77	□□□□□ -0.21
CSNK1E-208	ENST00000431611	CNRIP1	Q96F85	164 aa	Predicted RBP	13.77	□□□□□ -0.21
CSNK1E-208	ENST00000431611	ZNF681	Q96N22	645 aa		13.77	□□□□□ -0.21
CSNK1E-208	ENST00000431611	ZFP3	Q96NJ6	502 aa		13.77	□□□□□ -0.21
CSNK1E-208	ENST00000431611	PAFAH2	Q99487	392 aa		13.77	□□□□□ -0.21
CSNK1E-208	ENST00000431611	TM9SF2	Q99805	663 aa		13.77	□□□□□ -0.21
CSNK1E-208	ENST00000431611	MRPL57	Q9BQC6	102 aa	Known RBP	13.77	□□□□□ -0.21
CSNK1E-208	ENST00000431611	YIPF4	Q9BSR8	244 aa		13.77	□□□□□ -0.21
CSNK1E-208	ENST00000431611	SFXN3	Q9BWM7	321 aa		13.77	□□□□□ -0.21
CSNK1E-208	ENST00000431611	RBM24	Q9BX46	236 aa	Known RBP	13.77	□□□□□ -0.21
CSNK1E-208	ENST00000431611	FUT8	Q9BYC5	575 aa		13.77	□□□□□ -0.21
CSNK1E-208	ENST00000431611	OR2B2	Q9GZK3	357 aa		13.77	□□□□□ -0.21
CSNK1E-208	ENST00000431611	MRPL46	Q9H2W6	279 aa	Known RBP	13.77	□□□□□ -0.21
CSNK1E-208	ENST00000431611	DLL4	Q9NR61	685 aa		13.77	□□□□□ -0.21
CSNK1E-208	ENST00000431611	ANKHD1	Q8IWZ3	2542 aa	Known RBP	13.77	□□□□□ -0.21
CSNK1E-208	ENST00000431611	FRG2C	A6NGY1	282 aa		13.76	□□□□□ -0.21
CSNK1E-208	ENST00000431611	OR6C70	A6NIJ9	312 aa		13.76	□□□□□ -0.21
CSNK1E-208	ENST00000431611	CLCA1	A8K7I4	914 aa		13.76	□□□□□ -0.21
CSNK1E-208	ENST00000431611	REM1	O75628	298 aa		13.76	□□□□□ -0.21
CSNK1E-208	ENST00000431611	RCBTB2	O95199	551 aa		13.76	□□□□□ -0.21
CSNK1E-208	ENST00000431611	ESRRB	O95718	433 aa		13.76	□□□□□ -0.21
CSNK1E-208	ENST00000431611	HOXB4	P17483	251 aa	Predicted RBP	13.76	□□□□□ -0.21
CSNK1E-208	ENST00000431611	EMD	P50402	254 aa		13.76	□□□□□ -0.21
CSNK1E-208	ENST00000431611	MRPS35	P82673	323 aa	Known RBP	13.76	□□□□□ -0.21
CSNK1E-208	ENST00000431611	HMGCS1	Q01581	520 aa		13.76	□□□□□ -0.21
CSNK1E-208	ENST00000431611	CKAP4	Q07065	602 aa	Known RBP	13.76	□□□□□ -0.21
CSNK1E-208	ENST00000431611	LUZP2	Q86TE4	346 aa		13.76	□□□□□ -0.21
CSNK1E-208	ENST00000431611	IFNE	Q86WN2	208 aa		13.76	□□□□□ -0.21
CSNK1E-208	ENST00000431611	PLCZ1	Q86YW0	608 aa		13.76	□□□□□ -0.21
CSNK1E-208	ENST00000431611	C17orf53	Q8N3J3	647 aa	Predicted RBP	13.76	□□□□□ -0.21
CSNK1E-208	ENST00000431611	WNT2B	Q93097	391 aa		13.76	□□□□□ -0.21
CSNK1E-208	ENST00000431611	TMBIM1	Q969X1	311 aa		13.76	□□□□□ -0.21
CSNK1E-208	ENST00000431611	DACH2	Q96NX9	599 aa		13.76	□□□□□ -0.21
CSNK1E-208	ENST00000431611	COL21A1	Q96P44	957 aa		13.76	□□□□□ -0.21
CSNK1E-208	ENST00000431611	HBEGF	Q99075	208 aa		13.76	□□□□□ -0.21
CSNK1E-208	ENST00000431611	CDC42EP4	Q9H3Q1	356 aa	Known RBP	13.76	□□□□□ -0.21
CSNK1E-208	ENST00000431611	GSX1	Q9H4S2	264 aa	Predicted RBP	13.76	□□□□□ -0.21
CSNK1E-208	ENST00000431611	PLEKHF2	Q9H8W4	249 aa		13.76	□□□□□ -0.21
CSNK1E-208	ENST00000431611	PFDN4	Q9NQP4	134 aa		13.76	□□□□□ -0.21
CSNK1E-208	ENST00000431611	TAS2R10	Q9NYW0	307 aa		13.76	□□□□□ -0.21
CSNK1E-208	ENST00000431611	VPS29	Q9UBQ0	182 aa		13.76	□□□□□ -0.21
CSNK1E-208	ENST00000431611	TRPS1	Q9UHF7	1281 aa		13.76	□□□□□ -0.21
CSNK1E-208	ENST00000431611	UTS2R	Q9UKP6	389 aa		13.76	□□□□□ -0.21
CSNK1E-208	ENST00000431611	GPR55	Q9Y2T6	319 aa	Predicted RBP	13.76	□□□□□ -0.21
CSNK1E-208	ENST00000431611	ARHGAP21	Q5T5U3	1957 aa		13.76	□□□□□ -0.21
CSNK1E-208	ENST00000431611		A8MT66	165 aa		13.75	□□□□□ -0.21
CSNK1E-208	ENST00000431611	POC1B-GALNT4	F8VUJ3	575 aa		13.75	□□□□□ -0.21
CSNK1E-208	ENST00000431611	ABCB7	O75027	752 aa		13.75	□□□□□ -0.21
CSNK1E-208	ENST00000431611	BCAS2	O75934	225 aa	Predicted RBP	13.75	□□□□□ -0.21
CSNK1E-208	ENST00000431611	OR4F21	O95013	312 aa		13.75	□□□□□ -0.21
CSNK1E-208	ENST00000431611	CPA2	P48052	419 aa		13.75	□□□□□ -0.21
CSNK1E-208	ENST00000431611	STAR	P49675	285 aa		13.75	□□□□□ -0.21
CSNK1E-208	ENST00000431611	GFRA1	P56159	465 aa		13.75	□□□□□ -0.21
CSNK1E-208	ENST00000431611	POU4F3	Q15319	338 aa		13.75	□□□□□ -0.21
CSNK1E-208	ENST00000431611	AAGAB	Q6PD74	315 aa		13.75	□□□□□ -0.21
CSNK1E-208	ENST00000431611	SCIMP	Q6UWF3	145 aa		13.75	□□□□□ -0.21
CSNK1E-208	ENST00000431611	ADGRE4P	Q86SQ3	457 aa		13.75	□□□□□ -0.21
CSNK1E-208	ENST00000431611	CCDC116	Q8IYX3	515 aa		13.75	□□□□□ -0.21
CSNK1E-208	ENST00000431611	ZNF675	Q8TD23	568 aa		13.75	□□□□□ -0.21
CSNK1E-208	ENST00000431611	INTS12	Q96CB8	462 aa	Known RBP	13.75	□□□□□ -0.21
CSNK1E-208	ENST00000431611	DTNBP1	Q96EV8	351 aa		13.75	□□□□□ -0.21
CSNK1E-208	ENST00000431611	UCN2	Q96RP3	112 aa		13.75	□□□□□ -0.21
CSNK1E-208	ENST00000431611	ADO	Q96SZ5	270 aa		13.75	□□□□□ -0.21
CSNK1E-208	ENST00000431611	C1QTNF3	Q9BXJ4	246 aa		13.75	□□□□□ -0.21
CSNK1E-208	ENST00000431611	TSPYL1	Q9H0U9	437 aa		13.75	□□□□□ -0.21
CSNK1E-208	ENST00000431611	ACBD3	Q9H3P7	528 aa		13.75	□□□□□ -0.21
CSNK1E-208	ENST00000431611	GALNT8	Q9NY28	637 aa		13.75	□□□□□ -0.21
CSNK1E-208	ENST00000431611	HEY2	Q9UBP5	337 aa		13.75	□□□□□ -0.21
CSNK1E-208	ENST00000431611	RPH3A	Q9Y2J0	694 aa	Predicted RBP	13.75	□□□□□ -0.21
CSNK1E-208	ENST00000431611	TRIM49D1	C9J1S8	452 aa		13.74	□□□□□ -0.21
CSNK1E-208	ENST00000431611	KRT6A	P02538	564 aa		13.74	□□□□□ -0.21
CSNK1E-208	ENST00000431611	HRG	P04196	525 aa		13.74	□□□□□ -0.21
CSNK1E-208	ENST00000431611	KRT6B	P04259	564 aa		13.74	□□□□□ -0.21
CSNK1E-208	ENST00000431611	SBK3	P0C264	359 aa		13.74	□□□□□ -0.21
CSNK1E-208	ENST00000431611	HSD3B1	P14060	373 aa		13.74	□□□□□ -0.21
CSNK1E-208	ENST00000431611	CHM	P24386	653 aa		13.74	□□□□□ -0.21
CSNK1E-208	ENST00000431611	HSD3B2	P26439	372 aa		13.74	□□□□□ -0.21
CSNK1E-208	ENST00000431611	SRD5A2	P31213	254 aa		13.74	□□□□□ -0.21
CSNK1E-208	ENST00000431611	KRT20	P35900	424 aa		13.74	□□□□□ -0.21
CSNK1E-208	ENST00000431611	HSD17B3	P37058	310 aa		13.74	□□□□□ -0.21
CSNK1E-208	ENST00000431611	KRT6C	P48668	564 aa		13.74	□□□□□ -0.21
CSNK1E-208	ENST00000431611	EEF1A1	P68104	462 aa	Known RBP	13.74	□□□□□ -0.21
CSNK1E-208	ENST00000431611	CLC	Q05315	142 aa		13.74	□□□□□ -0.21
CSNK1E-208	ENST00000431611	GAB1	Q13480	694 aa		13.74	□□□□□ -0.21
CSNK1E-208	ENST00000431611	ZNF628	Q5EBL2	1059 aa		13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms