RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 PSMB10P40306 273 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 CDH4P55283 916 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 FAM74A1Q5RGS3 127 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 METAP1DQ6UB28 335 aaPredicted RBP8.35□□□□□ -1.07
RTN4-206ENST00000394611 LINC00471Q8N535 108 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 OR52L1Q8NGH7 329 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 GIMAP1Q8WWP7 306 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 NEIL2Q969S2 332 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 UPRTQ96BW1 309 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 TMEM169Q96HH4 297 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 OR51J1Q9H342 316 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 DDX31Q9H8H2 851 aaKnown RBP8.35□□□□□ -1.07
RTN4-206ENST00000394611 CUEDC1Q9NWM3 386 aaPredicted RBP8.35□□□□□ -1.07
RTN4-206ENST00000394611 IL17CQ9P0M4 197 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 COPZ2Q9P299 210 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 FKBP7Q9Y680 259 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 MIA3Q5JRA6 1907 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 B8ZZF3 427 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 DVL2O14641 736 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 POLR1CO15160 346 aaPredicted RBP8.34□□□□□ -1.07
RTN4-206ENST00000394611 COCHO43405 550 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 SLC2A10O95528 541 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 TSPAN12O95859 305 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 ELFN1P0C7U0 828 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 FUT1P19526 365 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 HTR7P34969 479 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 GPR1P46091 355 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 GZMKP49863 264 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 TIAL1Q01085 375 aaKnown RBP eCLIP8.34□□□□□ -1.07
RTN4-206ENST00000394611 GPR50Q13585 617 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 ZNF750Q32MQ0 723 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 FIGNL1Q6PIW4 674 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 XKRXQ6PP77 449 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 PARGQ86W56 976 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 CPOQ8IVL8 374 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 ZNF680Q8NEM1 530 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 RPLP0P6Q8NHW5 317 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 ZBED6CLQ96FA7 236 aaPredicted RBP8.34□□□□□ -1.07
RTN4-206ENST00000394611 FOXN4Q96NZ1 517 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 PKMYT1Q99640 499 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 MAPKAP1Q9BPZ7 522 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 MAGIXQ9H6Y5 334 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 HHATLQ9HCP6 504 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 THSD1Q9NS62 852 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 TEX10Q9NXF1 929 aaPredicted RBP8.34□□□□□ -1.07
RTN4-206ENST00000394611 PLCL2Q9UPR0 1127 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 SLC22A5O76082 557 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 FARS2O95363 451 aaKnown RBP8.34□□□□□ -1.07
RTN4-206ENST00000394611 CXCL10P02778 98 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 TFP02787 698 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 HLA-DPB1P04440 258 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 H2AFB2P0C5Z0 115 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 GRIK2Q13002 908 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 REEP3Q6NUK4 255 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 METTL2BQ6P1Q9 378 aaKnown RBP8.34□□□□□ -1.07
RTN4-206ENST00000394611 ZC3H14Q6PJT7 736 aaKnown RBP8.34□□□□□ -1.07
RTN4-206ENST00000394611 ZNF782Q6ZMW2 699 aaPredicted RBP8.34□□□□□ -1.07
RTN4-206ENST00000394611 KLHL36Q8N4N3 616 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 OR7G3Q8NG95 312 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 OR8K5Q8NH50 307 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 TRMT10AQ8TBZ6 339 aaKnown RBP8.34□□□□□ -1.07
RTN4-206ENST00000394611 WBP2Q969T9 261 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 CNDP2Q96KP4 475 aaKnown RBP8.34□□□□□ -1.07
RTN4-206ENST00000394611 OR4K3Q96R72 315 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 GON7Q9BXV9 100 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 ZCCHC2Q9C0B9 1178 aaKnown RBP8.34□□□□□ -1.07
RTN4-206ENST00000394611 SLC6A15Q9H2J7 730 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 ATP13A2Q9NQ11 1180 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 FAM120CQ9NX05 1096 aaKnown RBP8.34□□□□□ -1.07
RTN4-206ENST00000394611 FBXL2Q9UKC9 423 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 PLEKHA6Q9Y2H5 1048 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 SLC38A8A6NNN8 435 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 AKAP8O43823 692 aaKnown RBP8.34□□□□□ -1.07
RTN4-206ENST00000394611 IFNA16P05015 189 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 HOXD9P28356 352 aaPredicted RBP8.34□□□□□ -1.07
RTN4-206ENST00000394611 ASMTP46597 345 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 GCGRP47871 477 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 SOX9P48436 509 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 HCCSP53701 268 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 OR12D2P58182 307 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 EXOSC2Q13868 293 aaKnown RBP8.34□□□□□ -1.07
RTN4-206ENST00000394611 PIP5KL1Q5T9C9 394 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 C8orf82Q6P1X6 216 aaPredicted RBP8.34□□□□□ -1.07
RTN4-206ENST00000394611 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.34□□□□□ -1.075e-9■■■□□ 16.5
RTN4-206ENST00000394611 ZNF767PQ75MW2 155 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 PTOV1Q86YD1 416 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 OR8J1Q8NGP2 316 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 FBXW5Q969U6 566 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 ZNF471Q9BX82 626 aaPredicted RBP8.34□□□□□ -1.07
RTN4-206ENST00000394611 SRRQ9GZT4 340 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 TMEM185BQ9H7F4 350 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 MBD1Q9UIS9 605 aaPredicted RBP8.34□□□□□ -1.07
RTN4-206ENST00000394611 ENTPD4Q9Y227 616 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 RCE1Q9Y256 329 aa8.34□□□□□ -1.07
RTN4-206ENST00000394611 A0A0A6YYJ9 748 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 SCAMP2O15127 329 aaKnown RBP8.33□□□□□ -1.08
RTN4-206ENST00000394611 ADAM12O43184 909 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 STX11O75558 287 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 CXCL3P19876 107 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 NPR2P20594 1047 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms