RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 DOCK10Q96BY6 2186 aa13.05□□□□□ -0.32
VPS25-201ENST00000253794 ATMQ13315 3056 aa13.05□□□□□ -0.32
VPS25-201ENST00000253794 ASNA1O43681 348 aa13.05□□□□□ -0.32
VPS25-201ENST00000253794 ALPPP05187 535 aa13.05□□□□□ -0.32
VPS25-201ENST00000253794 NAGAP17050 411 aa13.05□□□□□ -0.32
VPS25-201ENST00000253794 SOAT1P35610 550 aa13.05□□□□□ -0.32
VPS25-201ENST00000253794 MVDP53602 400 aa13.05□□□□□ -0.32
VPS25-201ENST00000253794 COL28A1Q2UY09 1125 aa13.05□□□□□ -0.32
VPS25-201ENST00000253794 TRMT5Q32P41 509 aaKnown RBP13.05□□□□□ -0.32
VPS25-201ENST00000253794 LINC00303Q3SY05 128 aa13.05□□□□□ -0.32
VPS25-201ENST00000253794 C6orf10Q5SRN2 563 aa13.05□□□□□ -0.32
VPS25-201ENST00000253794 AP1ARQ63HQ0 302 aa13.05□□□□□ -0.32
VPS25-201ENST00000253794 REP15Q6BDI9 236 aa13.05□□□□□ -0.32
VPS25-201ENST00000253794 CDC73Q6P1J9 531 aa13.05□□□□□ -0.32
VPS25-201ENST00000253794 ISLR2Q6UXK2 745 aa13.05□□□□□ -0.32
VPS25-201ENST00000253794 NPSR1Q6W5P4 371 aa13.05□□□□□ -0.32
VPS25-201ENST00000253794 ZNF621Q6ZSS3 439 aa13.05□□□□□ -0.32
VPS25-201ENST00000253794 C6orf120Q7Z4R8 191 aa13.05□□□□□ -0.32
VPS25-201ENST00000253794 HPS6Q86YV9 775 aa13.05□□□□□ -0.32
VPS25-201ENST00000253794 DND1Q8IYX4 353 aaKnown RBP13.05□□□□□ -0.32
VPS25-201ENST00000253794 SIRT6Q8N6T7 355 aa13.05□□□□□ -0.32
VPS25-201ENST00000253794 OR5AK3PQ8NH89 298 aa13.05□□□□□ -0.32
VPS25-201ENST00000253794 EXTL1Q92935 676 aa13.05□□□□□ -0.32
VPS25-201ENST00000253794 MAGED4Q96JG8 741 aa13.05□□□□□ -0.32
VPS25-201ENST00000253794 STACQ99469 402 aa13.05□□□□□ -0.32
VPS25-201ENST00000253794 ACTRT3Q9BYD9 372 aa13.05□□□□□ -0.32
VPS25-201ENST00000253794 NXF5Q9H1B4 397 aaKnown RBP13.05□□□□□ -0.32
VPS25-201ENST00000253794 TPT1P8Q9HAU6 139 aa13.05□□□□□ -0.32
VPS25-201ENST00000253794 SLAMF8Q9P0V8 285 aa13.05□□□□□ -0.32
VPS25-201ENST00000253794 CPAMD8Q8IZJ3 1885 aa13.04□□□□□ -0.32
VPS25-201ENST00000253794 LOC100653049A0A140TA62 436 aa13.04□□□□□ -0.32
VPS25-201ENST00000253794 MKRN2OSH3BPM6 223 aa13.04□□□□□ -0.32
VPS25-201ENST00000253794 FXYD1O00168 92 aa13.04□□□□□ -0.32
VPS25-201ENST00000253794 MAN1A2O60476 641 aa13.04□□□□□ -0.32
VPS25-201ENST00000253794 ITGA10O75578 1167 aa13.04□□□□□ -0.32
VPS25-201ENST00000253794 KRT34O76011 436 aa13.04□□□□□ -0.32
VPS25-201ENST00000253794 KRT75O95678 551 aa13.04□□□□□ -0.32
VPS25-201ENST00000253794 GSNP06396 782 aa13.04□□□□□ -0.32
VPS25-201ENST00000253794 ACP2P11117 423 aa13.04□□□□□ -0.32
VPS25-201ENST00000253794 PPIBP23284 216 aaKnown RBP13.04□□□□□ -0.32
VPS25-201ENST00000253794 ZNF155Q12901 538 aaPredicted RBP13.04□□□□□ -0.32
VPS25-201ENST00000253794 TP53BP2Q13625 1128 aa13.04□□□□□ -0.32
VPS25-201ENST00000253794 LASP1Q14847 261 aaKnown RBP13.04□□□□□ -0.32
VPS25-201ENST00000253794 ZNHIT3Q15649 155 aaPredicted RBP13.04□□□□□ -0.32
VPS25-201ENST00000253794 GTDC1Q4AE62 458 aa13.04□□□□□ -0.32
VPS25-201ENST00000253794 CYP27C1Q4G0S4 372 aa13.04□□□□□ -0.32
VPS25-201ENST00000253794 ABHD17BQ5VST6 288 aa13.04□□□□□ -0.32
VPS25-201ENST00000253794 HLA-DQA1Q5Y7H0 255 aa13.04□□□□□ -0.32
VPS25-201ENST00000253794 B3GNTL1Q67FW5 361 aaPredicted RBP13.04□□□□□ -0.32
VPS25-201ENST00000253794 LYPD8Q6UX82 237 aa13.04□□□□□ -0.32
VPS25-201ENST00000253794 HACD2Q6Y1H2 254 aa13.04□□□□□ -0.32
VPS25-201ENST00000253794 DHDDSQ86SQ9 333 aa13.04□□□□□ -0.32
VPS25-201ENST00000253794 GPALPP1Q8IXQ4 340 aa13.04□□□□□ -0.32
VPS25-201ENST00000253794 TAGAPQ8N103 731 aa13.04□□□□□ -0.32
VPS25-201ENST00000253794 PCYOX1LQ8NBM8 494 aa13.04□□□□□ -0.32
VPS25-201ENST00000253794 ROPN1LQ96C74 230 aa13.04□□□□□ -0.32
VPS25-201ENST00000253794 WBP1Q96G27 269 aa13.04□□□□□ -0.32
VPS25-201ENST00000253794 SLC35G5Q96KT7 338 aa13.04□□□□□ -0.32
VPS25-201ENST00000253794 GAL3ST4Q96RP7 486 aa13.04□□□□□ -0.32
VPS25-201ENST00000253794 RASL10BQ96S79 203 aa13.04□□□□□ -0.32
VPS25-201ENST00000253794 CGREF1Q99674 301 aa13.04□□□□□ -0.32
VPS25-201ENST00000253794 PIGUQ9H490 435 aa13.04□□□□□ -0.32
VPS25-201ENST00000253794 SERHL2Q9H4I8 314 aa13.04□□□□□ -0.32
VPS25-201ENST00000253794 CDCP1Q9H5V8 836 aa13.04□□□□□ -0.32
VPS25-201ENST00000253794 VAPAQ9P0L0 249 aa13.04□□□□□ -0.32
VPS25-201ENST00000253794 A6NL46 340 aa13.03□□□□□ -0.32
VPS25-201ENST00000253794 DUXAA6NLW8 204 aa13.03□□□□□ -0.32
VPS25-201ENST00000253794 A8MUI8 341 aa13.03□□□□□ -0.32
VPS25-201ENST00000253794 ERVH48-1M5A8F1 160 aa13.03□□□□□ -0.32
VPS25-201ENST00000253794 MRASO14807 208 aa13.03□□□□□ -0.32
VPS25-201ENST00000253794 ZNF354AO60765 605 aaPredicted RBP13.03□□□□□ -0.32
VPS25-201ENST00000253794 OR2J2O76002 312 aa13.03□□□□□ -0.32
VPS25-201ENST00000253794 ANP32DO95626 131 aa13.03□□□□□ -0.32
VPS25-201ENST00000253794 AGR2O95994 175 aa13.03□□□□□ -0.32
VPS25-201ENST00000253794 BMP2P12643 396 aa13.03□□□□□ -0.32
VPS25-201ENST00000253794 SSR4P51571 173 aa13.03□□□□□ -0.32
VPS25-201ENST00000253794 PRKAG1P54619 331 aa13.03□□□□□ -0.32
VPS25-201ENST00000253794 CORO7P57737 925 aa13.03□□□□□ -0.32
VPS25-201ENST00000253794 FADDQ13158 208 aa13.03□□□□□ -0.32
VPS25-201ENST00000253794 KCNAB2Q13303 367 aa13.03□□□□□ -0.32
VPS25-201ENST00000253794 NFYCQ13952 458 aa13.03□□□□□ -0.32
VPS25-201ENST00000253794 RUNDC3AQ59EK9 446 aa13.03□□□□□ -0.32
VPS25-201ENST00000253794 C8orf82Q6P1X6 216 aaPredicted RBP13.03□□□□□ -0.32
VPS25-201ENST00000253794 C19orf48Q6RUI8 117 aa13.03□□□□□ -0.32
VPS25-201ENST00000253794 DNAJC14Q6Y2X3 702 aaPredicted RBP13.03□□□□□ -0.32
VPS25-201ENST00000253794 TRPM8Q7Z2W7 1104 aa13.03□□□□□ -0.32
VPS25-201ENST00000253794 SLC34A3Q8N130 599 aa13.03□□□□□ -0.32
VPS25-201ENST00000253794 POU5F2Q8N7G0 328 aa13.03□□□□□ -0.32
VPS25-201ENST00000253794 SLC16A11Q8NCK7 471 aa13.03□□□□□ -0.32
VPS25-201ENST00000253794 OR52N2Q8NGI0 321 aa13.03□□□□□ -0.32
VPS25-201ENST00000253794 FAM110BQ8TC76 370 aa13.03□□□□□ -0.32
VPS25-201ENST00000253794 SLC22A8Q8TCC7 542 aa13.03□□□□□ -0.32
VPS25-201ENST00000253794 HAS2Q92819 552 aa13.03□□□□□ -0.32
VPS25-201ENST00000253794 RCN3Q96D15 328 aa13.03□□□□□ -0.32
VPS25-201ENST00000253794 C16orf58Q96GQ5 468 aa13.03□□□□□ -0.32
VPS25-201ENST00000253794 ANKRD27Q96NW4 1050 aa13.03□□□□□ -0.32
VPS25-201ENST00000253794 RAD21L1Q9H4I0 556 aa13.03□□□□□ -0.32
VPS25-201ENST00000253794 Q9N2J8 555 aa13.03□□□□□ -0.32
VPS25-201ENST00000253794 EQTNQ9NQ60 294 aa13.03□□□□□ -0.32
VPS25-201ENST00000253794 STMN3Q9NZ72 180 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms